RNA–Protein interactions for RNA: ENST00000458893.1

SNORD42B-201, Transcript of small nucleolar RNA, C/D box 42B, humanhuman

BASIC

Gene SNORD42B, Length 67 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42B-201ENST00000458893 C9orf16Q9BUW7 83 aa-2.28□□□□□ -2.77
SNORD42B-201ENST00000458893 PRO1933Q9H354 126 aa-2.28□□□□□ -2.77
SNORD42B-201ENST00000458893 FAIMQ9NVQ4 179 aa-2.28□□□□□ -2.77
SNORD42B-201ENST00000458893 LINC01558Q9Y6Z2 57 aa-2.28□□□□□ -2.77
SNORD42B-201ENST00000458893 NCOA3Q9Y6Q9 1424 aa-2.28□□□□□ -2.77
SNORD42B-201ENST00000458893 FREM2Q5SZK8 3169 aa-2.29□□□□□ -2.78
SNORD42B-201ENST00000458893 IGLC7A0M8Q6 106 aa-2.29□□□□□ -2.78
SNORD42B-201ENST00000458893 S100A9P06702 114 aaKnown RBP-2.29□□□□□ -2.78
SNORD42B-201ENST00000458893 HIST1H1DP16402 221 aaKnown RBP-2.29□□□□□ -2.78
SNORD42B-201ENST00000458893 CCDC42Q96M95 316 aa-2.29□□□□□ -2.78
SNORD42B-201ENST00000458893 COPZ2Q9P299 210 aa-2.29□□□□□ -2.78
SNORD42B-201ENST00000458893 MAP3K5Q99683 1374 aa-2.29□□□□□ -2.78
SNORD42B-201ENST00000458893 PPIP5K1Q6PFW1 1433 aa-2.29□□□□□ -2.78
SNORD42B-201ENST00000458893 CSMD2Q7Z408 3487 aa-2.3□□□□□ -2.78
SNORD42B-201ENST00000458893 CDC42BPAQ5VT25 1732 aa-2.3□□□□□ -2.78
SNORD42B-201ENST00000458893 SMIM23A6NLE4 172 aa-2.3□□□□□ -2.78
SNORD42B-201ENST00000458893 SFT2D2O95562 160 aa-2.3□□□□□ -2.78
SNORD42B-201ENST00000458893 CBLN1P23435 193 aa-2.3□□□□□ -2.78
SNORD42B-201ENST00000458893 SNCAP37840 140 aa-2.3□□□□□ -2.78
SNORD42B-201ENST00000458893 RRAS2P62070 204 aaPredicted RBP-2.3□□□□□ -2.78
SNORD42B-201ENST00000458893 UBE2D4Q9Y2X8 147 aa-2.3□□□□□ -2.78
SNORD42B-201ENST00000458893 V9GYQ6 96 aa-2.3□□□□□ -2.78
SNORD42B-201ENST00000458893 PRUNE2Q8WUY3 3088 aa-2.3□□□□□ -2.78
SNORD42B-201ENST00000458893 MGAQ8IWI9 3026 aa-2.3□□□□□ -2.78
SNORD42B-201ENST00000458893 RIMS1Q86UR5 1692 aaKnown RBP-2.31□□□□□ -2.78
SNORD42B-201ENST00000458893 ABCC10Q5T3U5 1492 aa-2.31□□□□□ -2.78
SNORD42B-201ENST00000458893 TMEM238C9JI98 176 aa-2.31□□□□□ -2.78
SNORD42B-201ENST00000458893 ATG12O94817 140 aa-2.31□□□□□ -2.78
SNORD42B-201ENST00000458893 RPP14O95059 124 aaKnown RBP-2.31□□□□□ -2.78
SNORD42B-201ENST00000458893 CLLU1Q5K131 121 aa-2.31□□□□□ -2.78
SNORD42B-201ENST00000458893 DYDC1Q8WWB3 177 aa-2.31□□□□□ -2.78
SNORD42B-201ENST00000458893 DNAJC15Q9Y5T4 150 aa-2.31□□□□□ -2.78
SNORD42B-201ENST00000458893 XRN1Q8IZH2 1706 aaKnown RBP-2.31□□□□□ -2.78
SNORD42B-201ENST00000458893 SPTY2D1-AS1A0A0U1RR47 76 aa-2.32□□□□□ -2.78
SNORD42B-201ENST00000458893 SMIM24O75264 130 aa-2.32□□□□□ -2.78
SNORD42B-201ENST00000458893 TAC4Q86UU9 113 aa-2.32□□□□□ -2.78
SNORD42B-201ENST00000458893 TTC9CQ8N5M4 171 aa-2.32□□□□□ -2.78
SNORD42B-201ENST00000458893 SEC11CQ9BY50 192 aa-2.32□□□□□ -2.78
SNORD42B-201ENST00000458893 CALML5Q9NZT1 146 aa-2.32□□□□□ -2.78
SNORD42B-201ENST00000458893 NLRP1Q9C000 1473 aa-2.33□□□□□ -2.78
SNORD42B-201ENST00000458893 BTAF1O14981 1849 aa-2.33□□□□□ -2.78
SNORD42B-201ENST00000458893 A0A1B0GU69 56 aa-2.33□□□□□ -2.78
SNORD42B-201ENST00000458893 LOC100130705A0A1B0GUX0 176 aa-2.33□□□□□ -2.78
SNORD42B-201ENST00000458893 TPM1P09493 284 aa-2.33□□□□□ -2.78
SNORD42B-201ENST00000458893 WHAMMP3Q1A5X7 153 aa-2.33□□□□□ -2.78
SNORD42B-201ENST00000458893 NMSQ5H8A3 153 aa-2.33□□□□□ -2.78
SNORD42B-201ENST00000458893 S100A7L2Q5SY68 101 aa-2.33□□□□□ -2.78
SNORD42B-201ENST00000458893 TMEM78Q5T7P6 136 aa-2.33□□□□□ -2.78
SNORD42B-201ENST00000458893 KRTAP8-1Q8IUC2 63 aa-2.33□□□□□ -2.78
SNORD42B-201ENST00000458893 DYNLRB1Q9NP97 96 aa-2.33□□□□□ -2.78
SNORD42B-201ENST00000458893 ARMC1Q9NVT9 282 aa-2.33□□□□□ -2.78
SNORD42B-201ENST00000458893 NKIRAS1Q9NYS0 192 aa-2.33□□□□□ -2.78
SNORD42B-201ENST00000458893 ZFHX4Q86UP3 3567 aa-2.33□□□□□ -2.78
SNORD42B-201ENST00000458893 C1orf167Q5SNV9 1468 aa-2.33□□□□□ -2.78
SNORD42B-201ENST00000458893 MBD5Q9P267 1494 aa-2.33□□□□□ -2.78
SNORD42B-201ENST00000458893 SPAARA0A1B0GVQ0 90 aa-2.34□□□□□ -2.78
SNORD42B-201ENST00000458893 LOC285095A0A1B0GVY8 99 aa-2.34□□□□□ -2.78
SNORD42B-201ENST00000458893 FAM223BA6NKX1 122 aa-2.34□□□□□ -2.78
SNORD42B-201ENST00000458893 NIPSNAP2O75323 286 aa-2.34□□□□□ -2.78
SNORD42B-201ENST00000458893 HLA-DRB4P13762 266 aa-2.34□□□□□ -2.78
SNORD42B-201ENST00000458893 PPP1R2P3Q6NXS1 205 aa-2.34□□□□□ -2.78
SNORD42B-201ENST00000458893 C5orf38Q86SI9 138 aa-2.34□□□□□ -2.78
SNORD42B-201ENST00000458893 FAM24BQ8N5W8 94 aa-2.34□□□□□ -2.78
SNORD42B-201ENST00000458893 OR13C6PQ8NH95 151 aa-2.34□□□□□ -2.78
SNORD42B-201ENST00000458893 PSENENQ9NZ42 101 aa-2.34□□□□□ -2.78
SNORD42B-201ENST00000458893 SS18L2Q9UHA2 77 aa-2.34□□□□□ -2.78
SNORD42B-201ENST00000458893 HLA-DRB4X5D2U9 266 aa-2.34□□□□□ -2.78
SNORD42B-201ENST00000458893 DOCK2Q92608 1830 aa-2.34□□□□□ -2.78
SNORD42B-201ENST00000458893 ERCC6Q03468 1493 aa-2.34□□□□□ -2.78
SNORD42B-201ENST00000458893 MYH6P13533 1939 aa-2.34□□□□□ -2.78
SNORD42B-201ENST00000458893 ARHGEF10O15013 1369 aa-2.35□□□□□ -2.78
SNORD42B-201ENST00000458893 E7EQ34 232 aa-2.35□□□□□ -2.79
SNORD42B-201ENST00000458893 IL5P05113 134 aa-2.35□□□□□ -2.79
SNORD42B-201ENST00000458893 TNP1P09430 55 aa-2.35□□□□□ -2.79
SNORD42B-201ENST00000458893 CEBPGP53567 150 aa-2.35□□□□□ -2.79
SNORD42B-201ENST00000458893 WFDC9Q8NEX5 89 aa-2.35□□□□□ -2.79
SNORD42B-201ENST00000458893 LCN9Q8WX39 176 aa-2.35□□□□□ -2.79
SNORD42B-201ENST00000458893 PARVGQ9HBI0 331 aa-2.35□□□□□ -2.79
SNORD42B-201ENST00000458893 LRRC37AA6NMS7 1700 aa-2.36□□□□□ -2.79
SNORD42B-201ENST00000458893 TRAV13-2A0A0B4J235 113 aa-2.36□□□□□ -2.79
SNORD42B-201ENST00000458893 HSBP1L1C9JCN9 74 aa-2.36□□□□□ -2.79
SNORD42B-201ENST00000458893 SNCGO76070 127 aa-2.36□□□□□ -2.79
SNORD42B-201ENST00000458893 IGLC1P0CG04 106 aa-2.36□□□□□ -2.79
SNORD42B-201ENST00000458893 PP6455Q8WZ26 134 aa-2.36□□□□□ -2.79
SNORD42B-201ENST00000458893 MGST2Q99735 147 aa-2.36□□□□□ -2.79
SNORD42B-201ENST00000458893 BANF2Q9H503 90 aa-2.36□□□□□ -2.79
SNORD42B-201ENST00000458893 TRAPPC2LQ9UL33 140 aa-2.36□□□□□ -2.79
SNORD42B-201ENST00000458893 MED31Q9Y3C7 131 aa-2.36□□□□□ -2.79
SNORD42B-201ENST00000458893 EDC4Q6P2E9 1401 aaKnown RBP-2.36□□□□□ -2.79
SNORD42B-201ENST00000458893 SMG6Q86US8 1419 aaKnown RBP-2.36□□□□□ -2.79
SNORD42B-201ENST00000458893 MAGI2Q86UL8 1455 aa-2.37□□□□□ -2.79
SNORD42B-201ENST00000458893 PLEKHH2Q8IVE3 1493 aa-2.37□□□□□ -2.79
SNORD42B-201ENST00000458893 IFT140Q96RY7 1462 aa-2.37□□□□□ -2.79
SNORD42B-201ENST00000458893 PIGBOS1A0A0B4J2F0 54 aa-2.37□□□□□ -2.79
SNORD42B-201ENST00000458893 HMGN4O00479 90 aa-2.37□□□□□ -2.79
SNORD42B-201ENST00000458893 PFDN1O60925 122 aa-2.37□□□□□ -2.79
SNORD42B-201ENST00000458893 DHRS4L2Q6PKH6 230 aa-2.37□□□□□ -2.79
SNORD42B-201ENST00000458893 MAGOHBQ96A72 148 aaKnown RBP-2.37□□□□□ -2.79
SNORD42B-201ENST00000458893 CCDC32Q9BV29 185 aa-2.37□□□□□ -2.79
SNORD42B-201ENST00000458893 NXT2Q9NPJ8 142 aaKnown RBP-2.37□□□□□ -2.79
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms