RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 PANO1I0J062 215 aa11.16□□□□□ -0.62
SCARNA2-201ENST00000458748 CHTF8P0CG12 524 aa11.16□□□□□ -0.62
SCARNA2-201ENST00000458748 MAJINQ3KP22 176 aa11.16□□□□□ -0.62
SCARNA2-201ENST00000458748 C5orf38Q86SI9 138 aa11.16□□□□□ -0.62
SCARNA2-201ENST00000458748 OR10D4PQ8NGN7 298 aa11.16□□□□□ -0.62
SCARNA2-201ENST00000458748 PRSS3P2Q8NHM4 247 aa11.16□□□□□ -0.62
SCARNA2-201ENST00000458748 C7orf33Q8WU49 177 aa11.16□□□□□ -0.62
SCARNA2-201ENST00000458748 TMEM141Q96I45 108 aa11.16□□□□□ -0.62
SCARNA2-201ENST00000458748 C2orf48Q96LS8 159 aa11.16□□□□□ -0.62
SCARNA2-201ENST00000458748 C2orf88Q9BSF0 95 aa11.16□□□□□ -0.62
SCARNA2-201ENST00000458748 IGLV4-69A0A075B6H9 119 aa11.15□□□□□ -0.62
SCARNA2-201ENST00000458748 IGKV2-24A0A0C4DH68 120 aa11.15□□□□□ -0.62
SCARNA2-201ENST00000458748 TEX43Q6ZNM6 134 aa11.15□□□□□ -0.62
SCARNA2-201ENST00000458748 CAMK2N2Q96S95 79 aa11.15□□□□□ -0.62
SCARNA2-201ENST00000458748 PLAC8Q9NZF1 115 aa11.15□□□□□ -0.62
SCARNA2-201ENST00000458748 KRTAP29-1A8MX34 341 aaPredicted RBP11.14□□□□□ -0.63
SCARNA2-201ENST00000458748 F8WDY8 70 aa11.14□□□□□ -0.63
SCARNA2-201ENST00000458748 NPSP0C0P6 89 aa11.14□□□□□ -0.63
SCARNA2-201ENST00000458748 RHEBQ15382 184 aa11.14□□□□□ -0.63
SCARNA2-201ENST00000458748 C2orf66Q6UXQ4 117 aa11.14□□□□□ -0.63
SCARNA2-201ENST00000458748 LINC00526Q96FQ7 95 aa11.14□□□□□ -0.63
SCARNA2-201ENST00000458748 OPRPNQ99935 248 aaPredicted RBP11.14□□□□□ -0.63
SCARNA2-201ENST00000458748 GNB1LQ9BYB4 327 aa11.14□□□□□ -0.63
SCARNA2-201ENST00000458748 SPAG11BQ08648 103 aa11.13□□□□□ -0.63
SCARNA2-201ENST00000458748 PAPPA-AS1Q5QFB9 102 aa11.13□□□□□ -0.63
SCARNA2-201ENST00000458748 IGLV4-3A0A075B6K6 122 aa11.12□□□□□ -0.63
SCARNA2-201ENST00000458748 IGHV3OR16-9A0A0B4J2B5 98 aa11.12□□□□□ -0.63
SCARNA2-201ENST00000458748 LOC107984640A0A0U1RRK4 108 aa11.12□□□□□ -0.63
SCARNA2-201ENST00000458748 MT-ND6P03923 174 aa11.12□□□□□ -0.63
SCARNA2-201ENST00000458748 STPG4Q8N801 248 aa11.12□□□□□ -0.63
SCARNA2-201ENST00000458748 FAM104AQ969W3 186 aa11.12□□□□□ -0.63
SCARNA2-201ENST00000458748 CARHSP1Q9Y2V2 147 aaKnown RBP11.12□□□□□ -0.63
SCARNA2-201ENST00000458748 A0A096LNI7 61 aa11.11□□□□□ -0.63
SCARNA2-201ENST00000458748 C10orf91Q5T1B1 145 aa11.11□□□□□ -0.63
SCARNA2-201ENST00000458748 ORAOV1Q8WV07 137 aa11.11□□□□□ -0.63
SCARNA2-201ENST00000458748 VCX2Q9H322 139 aa11.11□□□□□ -0.63
SCARNA2-201ENST00000458748 RPS10P5Q9NQ39 176 aa11.11□□□□□ -0.63
SCARNA2-201ENST00000458748 LINC01549A6NIU2 74 aa11.1□□□□□ -0.63
SCARNA2-201ENST00000458748 NDUFA5Q16718 116 aa11.1□□□□□ -0.63
SCARNA2-201ENST00000458748 Q6ZRU5 148 aa11.1□□□□□ -0.63
SCARNA2-201ENST00000458748 KIAA1644Q3SXP7 199 aa11.09□□□□□ -0.63
SCARNA2-201ENST00000458748 A0A087WZ39 114 aa11.08□□□□□ -0.64
SCARNA2-201ENST00000458748 NDUFA1O15239 70 aa11.08□□□□□ -0.64
SCARNA2-201ENST00000458748 SEC11AP67812 179 aa11.08□□□□□ -0.64
SCARNA2-201ENST00000458748 RNF151Q2KHN1 245 aa11.08□□□□□ -0.64
SCARNA2-201ENST00000458748 OXTP01178 125 aa11.07□□□□□ -0.64
SCARNA2-201ENST00000458748 PTTG1IPP53801 180 aa11.07□□□□□ -0.64
SCARNA2-201ENST00000458748 LINC00242Q5T6M2 205 aa11.07□□□□□ -0.64
SCARNA2-201ENST00000458748 IGIPA6NJ69 53 aa11.06□□□□□ -0.64
SCARNA2-201ENST00000458748 UBE2D1P51668 147 aa11.06□□□□□ -0.64
SCARNA2-201ENST00000458748 GAGE2BQ13066 116 aa11.06□□□□□ -0.64
SCARNA2-201ENST00000458748 LINC01561Q8N1V8 128 aa11.06□□□□□ -0.64
SCARNA2-201ENST00000458748 TIMM17AQ99595 171 aa11.06□□□□□ -0.64
SCARNA2-201ENST00000458748 MRPL35Q9NZE8 188 aaKnown RBP11.06□□□□□ -0.64
SCARNA2-201ENST00000458748 SNAPINO95295 136 aa11.05□□□□□ -0.64
SCARNA2-201ENST00000458748 RPL18AQ02543 176 aaKnown RBP11.05□□□□□ -0.64
SCARNA2-201ENST00000458748 FABP9Q0Z7S8 132 aa11.05□□□□□ -0.64
SCARNA2-201ENST00000458748 TOMM6Q96B49 74 aa11.05□□□□□ -0.64
SCARNA2-201ENST00000458748 AMELXQ99217 191 aa11.05□□□□□ -0.64
SCARNA2-201ENST00000458748 MRPL18Q9H0U6 180 aaKnown RBP11.05□□□□□ -0.64
SCARNA2-201ENST00000458748 SVBPQ8N300 66 aa11.04□□□□□ -0.64
SCARNA2-201ENST00000458748 ALKBH7Q9BT30 221 aaPredicted RBP11.04□□□□□ -0.64
SCARNA2-201ENST00000458748 SMCO4Q9NRQ5 59 aa11.04□□□□□ -0.64
SCARNA2-201ENST00000458748 APOC3P02656 99 aa11.03□□□□□ -0.64
SCARNA2-201ENST00000458748 FA2HQ7L5A8 372 aa11.03□□□□□ -0.64
SCARNA2-201ENST00000458748 ERASQ7Z444 233 aa11.03□□□□□ -0.64
SCARNA2-201ENST00000458748 SCGB3A1Q96QR1 104 aa11.03□□□□□ -0.64
SCARNA2-201ENST00000458748 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.02□□□□□ -0.65
SCARNA2-201ENST00000458748 PRSS2P07478 247 aa11.02□□□□□ -0.65
SCARNA2-201ENST00000458748 HERVK_113P63121 156 aa11.02□□□□□ -0.65
SCARNA2-201ENST00000458748 GEMIN7Q9H840 131 aaKnown RBP11.02□□□□□ -0.65
SCARNA2-201ENST00000458748 LINC00173Q6ZV60 143 aa11.01□□□□□ -0.65
SCARNA2-201ENST00000458748 FAM19A3Q7Z5A8 133 aa11.01□□□□□ -0.65
SCARNA2-201ENST00000458748 PACRGQ96M98 296 aaPredicted RBP11.01□□□□□ -0.65
SCARNA2-201ENST00000458748 LINC01546A6NGU7 62 aa11□□□□□ -0.65
SCARNA2-201ENST00000458748 TRBV30A0A0K0K1B3 111 aa10.99□□□□□ -0.65
SCARNA2-201ENST00000458748 HNRNPA3P51991 378 aaKnown RBP10.99□□□□□ -0.65
SCARNA2-201ENST00000458748 TRAPPC1Q9Y5R8 145 aa10.99□□□□□ -0.65
SCARNA2-201ENST00000458748 LRP1Q07954 4544 aaKnown RBP10.99□□□□□ -0.65
SCARNA2-201ENST00000458748 A0A0J9YXV3 536 aa10.98□□□□□ -0.65
SCARNA2-201ENST00000458748 TLX1NBP0CAT3 122 aa10.98□□□□□ -0.65
SCARNA2-201ENST00000458748 CKS1BP61024 79 aa10.98□□□□□ -0.65
SCARNA2-201ENST00000458748 PRR3P79522 188 aaKnown RBP10.98□□□□□ -0.65
SCARNA2-201ENST00000458748 ZC2HC1BQ5TFG8 222 aa10.98□□□□□ -0.65
SCARNA2-201ENST00000458748 UNQ6190/PRO20217Q6UXQ8 127 aa10.98□□□□□ -0.65
SCARNA2-201ENST00000458748 KIAA0087Q14695 138 aa10.97□□□□□ -0.65
SCARNA2-201ENST00000458748 C6orf226Q5I0X4 101 aa10.97□□□□□ -0.65
SCARNA2-201ENST00000458748 Q6ZRP5 223 aa10.97□□□□□ -0.65
SCARNA2-201ENST00000458748 C6orf48Q9UBA6 75 aa10.97□□□□□ -0.65
SCARNA2-201ENST00000458748 C10orf25Q5T742 122 aa10.96□□□□□ -0.65
SCARNA2-201ENST00000458748 TOMM7Q9P0U1 55 aa10.96□□□□□ -0.65
SCARNA2-201ENST00000458748 RAB5BP61020 215 aa10.95□□□□□ -0.66
SCARNA2-201ENST00000458748 C9orf116Q5BN46 136 aaPredicted RBP10.95□□□□□ -0.66
SCARNA2-201ENST00000458748 Q8IZM0 81 aa10.95□□□□□ -0.66
SCARNA2-201ENST00000458748 LINC00469Q8N7U9 141 aa10.94□□□□□ -0.66
SCARNA2-201ENST00000458748 TINCRA0A1B0GVN0 87 aa10.93□□□□□ -0.66
SCARNA2-201ENST00000458748 CXCL5P42830 114 aa10.93□□□□□ -0.66
SCARNA2-201ENST00000458748 PMVKQ15126 192 aa10.93□□□□□ -0.66
SCARNA2-201ENST00000458748 SERTAD4-AS1Q5TG53 156 aa10.93□□□□□ -0.66
SCARNA2-201ENST00000458748 CDKN2A-AS1Q9UH64 79 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 179 ms