RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 Q9H8V8 135 aa8.86□□□□□ -0.99
LINC00959-201ENST00000456581 GIG44P09565 113 aaPredicted RBP8.86□□□□□ -0.99
LINC00959-201ENST00000456581 NDUFV3P56181 108 aaKnown RBP8.86□□□□□ -0.99
LINC00959-201ENST00000456581 GAGE2BQ13066 116 aa8.86□□□□□ -0.99
LINC00959-201ENST00000456581 GAGE2EQ4V326 116 aa8.86□□□□□ -0.99
LINC00959-201ENST00000456581 UBE2WQ96B02 151 aa8.86□□□□□ -0.99
LINC00959-201ENST00000456581 GAGE2DQ9UEU5 116 aa8.86□□□□□ -0.99
LINC00959-201ENST00000456581 TRGV1A0A0A0MS02 117 aa8.85□□□□□ -0.99
LINC00959-201ENST00000456581 DGAT2L7PQ6IED9 249 aa8.85□□□□□ -0.99
LINC00959-201ENST00000456581 SOSTDC1Q6X4U4 206 aa8.85□□□□□ -0.99
LINC00959-201ENST00000456581 TRAV8-4A0A0B4J246 113 aa8.85□□□□□ -0.99
LINC00959-201ENST00000456581 SPANXDQ9BXN6 97 aa8.85□□□□□ -0.99
LINC00959-201ENST00000456581 SPANXCQ9NY87 97 aa8.85□□□□□ -0.99
LINC00959-201ENST00000456581 IGLV1-51P01701 117 aa8.84□□□□□ -0.99
LINC00959-201ENST00000456581 C19orf73Q9NVV2 129 aa8.84□□□□□ -0.99
LINC00959-201ENST00000456581 KRTAP21-3Q3LHN1 58 aa8.84□□□□□ -0.99
LINC00959-201ENST00000456581 BAHCC1Q9P281 2608 aa8.84□□□□□ -0.99
LINC00959-201ENST00000456581 LINC00242Q5T6M2 205 aa8.83□□□□□ -1
LINC00959-201ENST00000456581 Q6ZTI0 123 aa8.83□□□□□ -1
LINC00959-201ENST00000456581 SPANXA1Q9NS26 97 aa8.83□□□□□ -1
LINC00959-201ENST00000456581 PKD1L1Q8TDX9 2849 aa8.83□□□□□ -1
LINC00959-201ENST00000456581 IGKV3OR2-268A0A0C4DH90 116 aa8.83□□□□□ -1
LINC00959-201ENST00000456581 TMEM262E9PQX1 116 aa8.83□□□□□ -1
LINC00959-201ENST00000456581 NTM-AS1Q6ZSK4 140 aa8.82□□□□□ -1
LINC00959-201ENST00000456581 CHCHD5Q9BSY4 110 aa8.82□□□□□ -1
LINC00959-201ENST00000456581 MAST4O15021 2626 aa8.82□□□□□ -1
LINC00959-201ENST00000456581 PIK3CD-AS1Q5SR53 167 aa8.82□□□□□ -1
LINC00959-201ENST00000456581 LOC100131303A0A0U1RQF7 123 aa8.81□□□□□ -1
LINC00959-201ENST00000456581 GAGE12JA6NER3 117 aa8.81□□□□□ -1
LINC00959-201ENST00000456581 PF4P02776 101 aa8.81□□□□□ -1
LINC00959-201ENST00000456581 GAGE4Q13068 117 aa8.81□□□□□ -1
LINC00959-201ENST00000456581 CFAP161Q6P656 301 aa8.81□□□□□ -1
LINC00959-201ENST00000456581 LINC00308Q8TCZ7 52 aa8.81□□□□□ -1
LINC00959-201ENST00000456581 LST1O00453 97 aa8.81□□□□□ -1
LINC00959-201ENST00000456581 EDA2RQ9HAV5 297 aa8.81□□□□□ -1
LINC00959-201ENST00000456581 BEAN1Q3B7T3 259 aa8.8□□□□□ -1
LINC00959-201ENST00000456581 NOP10Q9NPE3 64 aaKnown RBP8.8□□□□□ -1
LINC00959-201ENST00000456581 CYSRT1A8MQ03 144 aa8.8□□□□□ -1
LINC00959-201ENST00000456581 NDUFA1O15239 70 aa8.8□□□□□ -1
LINC00959-201ENST00000456581 RS1O15537 224 aa8.8□□□□□ -1
LINC00959-201ENST00000456581 COX6CP09669 75 aa8.8□□□□□ -1
LINC00959-201ENST00000456581 FAM218AQ96MZ4 157 aa8.8□□□□□ -1
LINC00959-201ENST00000456581 SMIM1B2RUZ4 78 aa8.79□□□□□ -1
LINC00959-201ENST00000456581 MEIG1Q5JSS6 88 aa8.79□□□□□ -1
LINC00959-201ENST00000456581 PRIMA1Q86XR5 153 aa8.79□□□□□ -1
LINC00959-201ENST00000456581 SMCR5Q8TEV8 140 aa8.79□□□□□ -1
LINC00959-201ENST00000456581 M0QXV9 152 aa8.78□□□□□ -1
LINC00959-201ENST00000456581 IFITM1P13164 125 aa8.78□□□□□ -1
LINC00959-201ENST00000456581 LINC00482Q8N8I6 264 aa8.78□□□□□ -1
LINC00959-201ENST00000456581 FBN1P35555 2871 aaKnown RBP8.78□□□□□ -1
LINC00959-201ENST00000456581 C9orf129Q5T035 196 aaKnown RBP8.77□□□□□ -1.01
LINC00959-201ENST00000456581 Q9HAA7 133 aa8.77□□□□□ -1.01
LINC00959-201ENST00000456581 C22orf24Q9Y442 160 aa8.77□□□□□ -1.01
LINC00959-201ENST00000456581 IGLV5-45A0A087WSX0 123 aa8.76□□□□□ -1.01
LINC00959-201ENST00000456581 PLAC8L1A1L4L8 177 aa8.76□□□□□ -1.01
LINC00959-201ENST00000456581 GAGE7O76087 117 aa8.76□□□□□ -1.01
LINC00959-201ENST00000456581 GAGE12FP0CL80 117 aa8.76□□□□□ -1.01
LINC00959-201ENST00000456581 GAGE12GP0CL81 117 aa8.76□□□□□ -1.01
LINC00959-201ENST00000456581 GAGE12IP0CL82 117 aa8.76□□□□□ -1.01
LINC00959-201ENST00000456581 IL17DQ8TAD2 202 aa8.76□□□□□ -1.01
LINC00959-201ENST00000456581 FAM110AQ9BQ89 295 aa8.76□□□□□ -1.01
LINC00959-201ENST00000456581 NOTCH1P46531 2555 aa8.76□□□□□ -1.01
LINC00959-201ENST00000456581 IGLV5-39A0A0G2JS06 123 aa8.76□□□□□ -1.01
LINC00959-201ENST00000456581 CMC4P56277 68 aaPredicted RBP8.76□□□□□ -1.01
LINC00959-201ENST00000456581 TIRAPP58753 221 aa8.76□□□□□ -1.01
LINC00959-201ENST00000456581 CSNK1G2-AS1Q8NCQ2 148 aa8.76□□□□□ -1.01
LINC00959-201ENST00000456581 TOMM7Q9P0U1 55 aa8.76□□□□□ -1.01
LINC00959-201ENST00000456581 SHISA2Q6UWI4 295 aa8.75□□□□□ -1.01
LINC00959-201ENST00000456581 SMIM20Q8N5G0 67 aa8.75□□□□□ -1.01
LINC00959-201ENST00000456581 COL6A5A8TX70 2615 aa8.75□□□□□ -1.01
LINC00959-201ENST00000456581 H3BT86 120 aa8.75□□□□□ -1.01
LINC00959-201ENST00000456581 F5H768 121 aa8.74□□□□□ -1.01
LINC00959-201ENST00000456581 K7EQD1 137 aa8.74□□□□□ -1.01
LINC00959-201ENST00000456581 CIRBPQ14011 172 aaKnown RBP8.74□□□□□ -1.01
LINC00959-201ENST00000456581 TRGV2A0A075B6R0 118 aa8.74□□□□□ -1.01
LINC00959-201ENST00000456581 HERVK_113P63121 156 aa8.74□□□□□ -1.01
LINC00959-201ENST00000456581 Q6Q795 121 aa8.74□□□□□ -1.01
LINC00959-201ENST00000456581 DNAJC30Q96LL9 226 aa8.74□□□□□ -1.01
LINC00959-201ENST00000456581 C11orf68Q9H3H3 251 aaKnown RBP8.73□□□□□ -1.01
LINC00959-201ENST00000456581 CDC42SE2Q9NRR3 84 aa8.73□□□□□ -1.01
LINC00959-201ENST00000456581 RPL36AP83881 106 aaKnown RBP8.73□□□□□ -1.01
LINC00959-201ENST00000456581 RPL36ALQ969Q0 106 aaKnown RBP8.73□□□□□ -1.01
LINC00959-201ENST00000456581 TIMM17BO60830 172 aa8.72□□□□□ -1.01
LINC00959-201ENST00000456581 HERV-K104P63124 156 aa8.72□□□□□ -1.01
LINC00959-201ENST00000456581 DAZ2Q13117 558 aaKnown RBP8.72□□□□□ -1.01
LINC00959-201ENST00000456581 DAZ4Q86SG3 579 aaKnown RBP8.72□□□□□ -1.01
LINC00959-201ENST00000456581 DAZ3Q9NR90 486 aaKnown RBP8.72□□□□□ -1.01
LINC00959-201ENST00000456581 LINC01600Q96MT4 127 aa8.72□□□□□ -1.01
LINC00959-201ENST00000456581 COX7A2LO14548 114 aa8.71□□□□□ -1.02
LINC00959-201ENST00000456581 C16orf74Q96GX8 76 aa8.71□□□□□ -1.02
LINC00959-201ENST00000456581 IGLV4-60A0A075B6I1 120 aa8.71□□□□□ -1.02
LINC00959-201ENST00000456581 FAM236AA0A1B0GUQ0 79 aa8.7□□□□□ -1.02
LINC00959-201ENST00000456581 FAM236BA0A1B0GV22 79 aa8.7□□□□□ -1.02
LINC00959-201ENST00000456581 MIR7-3HGQ8N6C7 128 aa8.7□□□□□ -1.02
LINC00959-201ENST00000456581 UBE2L6O14933 153 aa8.7□□□□□ -1.02
LINC00959-201ENST00000456581 LINC00337Q8N6G1 96 aa8.7□□□□□ -1.02
LINC00959-201ENST00000456581 DEFB4AO15263 64 aa8.69□□□□□ -1.02
LINC00959-201ENST00000456581 ATP5G1P05496 136 aa8.69□□□□□ -1.02
LINC00959-201ENST00000456581 DEFB130BP0DP73 79 aa8.69□□□□□ -1.02
LINC00959-201ENST00000456581 DEFB130AP0DP74 79 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms