RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 FHL3Q13643 280 aa3.62□□□□□ -1.83
PCDH9-203ENST00000456367 ABCA4P78363 2273 aa3.62□□□□□ -1.83
PCDH9-203ENST00000456367 H0Y9J4 135 aa3.62□□□□□ -1.83
PCDH9-203ENST00000456367 BEAN1Q3B7T3 259 aa3.62□□□□□ -1.83
PCDH9-203ENST00000456367 IL17DQ8TAD2 202 aa3.62□□□□□ -1.83
PCDH9-203ENST00000456367 ESM1Q9NQ30 184 aa3.62□□□□□ -1.83
PCDH9-203ENST00000456367 DEFB114Q30KQ6 69 aa3.62□□□□□ -1.83
PCDH9-203ENST00000456367 LINC00575Q6W349 94 aa3.62□□□□□ -1.83
PCDH9-203ENST00000456367 UBE2DNLQ8IWF7 75 aa3.62□□□□□ -1.83
PCDH9-203ENST00000456367 KLK12Q9UKR0 248 aa3.62□□□□□ -1.83
PCDH9-203ENST00000456367 LOC110117498A0A087WWA1 95 aa3.61□□□□□ -1.83
PCDH9-203ENST00000456367 IGLV1-40P01703 118 aa3.61□□□□□ -1.83
PCDH9-203ENST00000456367 C22orf34Q6ZV56 151 aa3.61□□□□□ -1.83
PCDH9-203ENST00000456367 Q8N9L7 120 aa3.61□□□□□ -1.83
PCDH9-203ENST00000456367 FAM19A4Q96LR4 140 aa3.61□□□□□ -1.83
PCDH9-203ENST00000456367 FAM30AQ9NZY2 134 aa3.61□□□□□ -1.83
PCDH9-203ENST00000456367 K7ERS5 55 aa3.61□□□□□ -1.83
PCDH9-203ENST00000456367 HILS1P60008 231 aa3.61□□□□□ -1.83
PCDH9-203ENST00000456367 DEFB136Q30KP8 78 aa3.61□□□□□ -1.83
PCDH9-203ENST00000456367 C9orf66Q5T8R8 295 aa3.61□□□□□ -1.83
PCDH9-203ENST00000456367 C1orf158Q8N1D5 194 aa3.61□□□□□ -1.83
PCDH9-203ENST00000456367 CELA1Q9UNI1 258 aa3.61□□□□□ -1.83
PCDH9-203ENST00000456367 C3orf84H3BNL1 204 aa3.61□□□□□ -1.83
PCDH9-203ENST00000456367 IGKV4-1P06312 121 aa3.61□□□□□ -1.83
PCDH9-203ENST00000456367 LINC00315P59091 139 aa3.61□□□□□ -1.83
PCDH9-203ENST00000456367 RNF223E7ERA6 249 aa3.6□□□□□ -1.83
PCDH9-203ENST00000456367 H3BS24 57 aa3.6□□□□□ -1.83
PCDH9-203ENST00000456367 COX6A2Q02221 97 aa3.6□□□□□ -1.83
PCDH9-203ENST00000456367 LINC00337Q8N6G1 96 aa3.6□□□□□ -1.83
PCDH9-203ENST00000456367 TRIOBPQ9H2D6 2365 aa3.6□□□□□ -1.83
PCDH9-203ENST00000456367 PRR14LQ5THK1 2151 aa3.6□□□□□ -1.83
PCDH9-203ENST00000456367 H3BPC8 53 aa3.6□□□□□ -1.83
PCDH9-203ENST00000456367 KLKP1Q107X0 134 aa3.6□□□□□ -1.83
PCDH9-203ENST00000456367 LINC00336Q6ZUF6 198 aa3.6□□□□□ -1.83
PCDH9-203ENST00000456367 COL6A6A6NMZ7 2263 aa3.6□□□□□ -1.83
PCDH9-203ENST00000456367 B9D2Q9BPU9 175 aa3.6□□□□□ -1.83
PCDH9-203ENST00000456367 NAV3Q8IVL0 2385 aa3.6□□□□□ -1.83
PCDH9-203ENST00000456367 PSPHP1O15172 72 aa3.6□□□□□ -1.83
PCDH9-203ENST00000456367 SPTBN2O15020 2390 aa3.59□□□□□ -1.83
PCDH9-203ENST00000456367 LRP4O75096 1905 aa3.59□□□□□ -1.83
PCDH9-203ENST00000456367 LINC00482Q8N8I6 264 aa3.59□□□□□ -1.83
PCDH9-203ENST00000456367 FHL2Q14192 279 aa3.59□□□□□ -1.84
PCDH9-203ENST00000456367 WFDC10BQ8IUB3 73 aa3.59□□□□□ -1.84
PCDH9-203ENST00000456367 CACNA1BQ00975 2339 aa3.59□□□□□ -1.84
PCDH9-203ENST00000456367 A0A1W2PNU3 283 aaPredicted RBP3.59□□□□□ -1.84
PCDH9-203ENST00000456367 EGFEM1PQ0D2K5 195 aa3.59□□□□□ -1.84
PCDH9-203ENST00000456367 LINC00208Q96KT6 92 aa3.59□□□□□ -1.84
PCDH9-203ENST00000456367 GRNP28799 593 aaKnown RBP3.58□□□□□ -1.84
PCDH9-203ENST00000456367 ZNF843Q8N446 348 aa3.58□□□□□ -1.84
PCDH9-203ENST00000456367 PRRC2AP48634 2157 aaKnown RBP3.58□□□□□ -1.84
PCDH9-203ENST00000456367 A0A1B0GUV1 79 aa3.58□□□□□ -1.84
PCDH9-203ENST00000456367 C11orf71Q6IPW1 123 aa3.58□□□□□ -1.84
PCDH9-203ENST00000456367 C6orf223Q8N319 242 aa3.58□□□□□ -1.84
PCDH9-203ENST00000456367 LITAFQ99732 161 aa3.58□□□□□ -1.84
PCDH9-203ENST00000456367 HIGD2AQ9BW72 106 aa3.58□□□□□ -1.84
PCDH9-203ENST00000456367 CYP4F30PQ9H0H9 118 aa3.58□□□□□ -1.84
PCDH9-203ENST00000456367 EXPH5Q8NEV8 1989 aa3.58□□□□□ -1.84
PCDH9-203ENST00000456367 HCG22E2RYF7 251 aa3.58□□□□□ -1.84
PCDH9-203ENST00000456367 SYCNQ0VAF6 134 aa3.58□□□□□ -1.84
PCDH9-203ENST00000456367 SMCR5Q8TEV8 140 aa3.58□□□□□ -1.84
PCDH9-203ENST00000456367 GVINP1Q7Z2Y8 2422 aa3.58□□□□□ -1.84
PCDH9-203ENST00000456367 IGHV4-30-2A0A087WSY4 118 aa3.58□□□□□ -1.84
PCDH9-203ENST00000456367 ADORA2A-AS1P86434 159 aa3.58□□□□□ -1.84
PCDH9-203ENST00000456367 PRR4Q16378 134 aa3.58□□□□□ -1.84
PCDH9-203ENST00000456367 LELP1Q5T871 98 aa3.58□□□□□ -1.84
PCDH9-203ENST00000456367 WFDC13Q8IUB5 93 aa3.58□□□□□ -1.84
PCDH9-203ENST00000456367 CNOT1A5YKK6 2376 aaKnown RBP3.57□□□□□ -1.84
PCDH9-203ENST00000456367 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.57□□□□□ -1.84
PCDH9-203ENST00000456367 ARHGAP32A7KAX9 2087 aa3.57□□□□□ -1.84
PCDH9-203ENST00000456367 PTPRSQ13332 1948 aa3.57□□□□□ -1.84
PCDH9-203ENST00000456367 C14orf177Q52M58 125 aa3.57□□□□□ -1.84
PCDH9-203ENST00000456367 C1orf137Q5JT78 98 aa3.57□□□□□ -1.84
PCDH9-203ENST00000456367 Q8N2B8 174 aa3.57□□□□□ -1.84
PCDH9-203ENST00000456367 XAGE1AQ9HD64 81 aa3.57□□□□□ -1.84
PCDH9-203ENST00000456367 NOTCH3Q9UM47 2321 aa3.57□□□□□ -1.84
PCDH9-203ENST00000456367 ADAMTS20P59510 1910 aa3.57□□□□□ -1.84
PCDH9-203ENST00000456367 Q6ZQT0 140 aa3.57□□□□□ -1.84
PCDH9-203ENST00000456367 KLK9Q2XQG4 91 aa3.57□□□□□ -1.84
PCDH9-203ENST00000456367 FAM218AQ96MZ4 157 aa3.56□□□□□ -1.84
PCDH9-203ENST00000456367 LRCOL1A6NCL2 159 aa3.56□□□□□ -1.84
PCDH9-203ENST00000456367 Q6YL49 198 aa3.56□□□□□ -1.84
PCDH9-203ENST00000456367 TET2Q6N021 2002 aaPredicted RBP3.56□□□□□ -1.84
PCDH9-203ENST00000456367 C10orf25Q5T742 122 aa3.56□□□□□ -1.84
PCDH9-203ENST00000456367 SPATA3Q8NHX4 192 aa3.56□□□□□ -1.84
PCDH9-203ENST00000456367 COL4A2P08572 1712 aa3.56□□□□□ -1.84
PCDH9-203ENST00000456367 CYSRT1A8MQ03 144 aa3.56□□□□□ -1.84
PCDH9-203ENST00000456367 ACACAQ13085 2346 aa3.56□□□□□ -1.84
PCDH9-203ENST00000456367 PCNX1Q96RV3 2341 aa3.56□□□□□ -1.84
PCDH9-203ENST00000456367 EIF4EBP3O60516 100 aaPredicted RBP3.55□□□□□ -1.84
PCDH9-203ENST00000456367 Q96MF0 132 aa3.55□□□□□ -1.84
PCDH9-203ENST00000456367 H0Y9P7 68 aa3.55□□□□□ -1.84
PCDH9-203ENST00000456367 IGHV3OR16-9A0A0B4J2B5 98 aa3.54□□□□□ -1.84
PCDH9-203ENST00000456367 C2orf48Q96LS8 159 aa3.54□□□□□ -1.84
PCDH9-203ENST00000456367 H7BZZ5 65 aa3.54□□□□□ -1.84
PCDH9-203ENST00000456367 ELOF1P60002 83 aaKnown RBP3.54□□□□□ -1.84
PCDH9-203ENST00000456367 Q8NA96 180 aa3.54□□□□□ -1.84
PCDH9-203ENST00000456367 CEP192Q8TEP8 1941 aa3.54□□□□□ -1.84
PCDH9-203ENST00000456367 NCOR1O75376 2440 aa3.53□□□□□ -1.84
PCDH9-203ENST00000456367 MED13LQ71F56 2210 aa3.53□□□□□ -1.84
PCDH9-203ENST00000456367 KPRPQ5T749 579 aaPredicted RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms