RNA–Protein interactions for RNA: ENST00000455840.1

RPL39P39-201, Transcript of ribosomal protein L39 pseudogene 39, humanhuman

BASIC

Gene RPL39P39, Length 151 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P39-201ENST00000455840 MAP1BP46821 2468 aaKnown RBP-0.21□□□□□ -2.44
RPL39P39-201ENST00000455840 TENM2Q9NT68 2774 aa-0.21□□□□□ -2.44
RPL39P39-201ENST00000455840 NUP188Q5SRE5 1749 aa-0.21□□□□□ -2.44
RPL39P39-201ENST00000455840 ABCA3Q99758 1704 aa-0.21□□□□□ -2.44
RPL39P39-201ENST00000455840 SHANK2Q9UPX8 1470 aa-0.22□□□□□ -2.44
RPL39P39-201ENST00000455840 PDCD11Q14690 1871 aaKnown RBP-0.22□□□□□ -2.44
RPL39P39-201ENST00000455840 ANKRD36A6QL64 1941 aa-0.22□□□□□ -2.44
RPL39P39-201ENST00000455840 TRAV22A0A0B4J277 110 aa-0.22□□□□□ -2.44
RPL39P39-201ENST00000455840 LOC285095A0A1B0GVY8 99 aa-0.22□□□□□ -2.44
RPL39P39-201ENST00000455840 LINC00587B1AMM8 73 aa-0.22□□□□□ -2.44
RPL39P39-201ENST00000455840 CORTO00230 105 aa-0.22□□□□□ -2.44
RPL39P39-201ENST00000455840 SFT2D2O95562 160 aa-0.22□□□□□ -2.44
RPL39P39-201ENST00000455840 TPPP2P59282 170 aa-0.22□□□□□ -2.44
RPL39P39-201ENST00000455840 TMEM170BQ5T4T1 132 aa-0.22□□□□□ -2.44
RPL39P39-201ENST00000455840 MRPL54Q6P161 138 aaKnown RBP-0.22□□□□□ -2.44
RPL39P39-201ENST00000455840 TMEM263Q8WUH6 116 aaKnown RBP-0.22□□□□□ -2.44
RPL39P39-201ENST00000455840 NPVFQ9HCQ7 196 aa-0.22□□□□□ -2.44
RPL39P39-201ENST00000455840 COL6A3P12111 3177 aa-0.22□□□□□ -2.44
RPL39P39-201ENST00000455840 CHD8Q9HCK8 2581 aa-0.22□□□□□ -2.45
RPL39P39-201ENST00000455840 DNAJC13O75165 2243 aa-0.22□□□□□ -2.45
RPL39P39-201ENST00000455840 ADGRL2O95490 1459 aa-0.22□□□□□ -2.45
RPL39P39-201ENST00000455840 MAGI1Q96QZ7 1491 aaPredicted RBP-0.22□□□□□ -2.45
RPL39P39-201ENST00000455840 EHBP1L1Q8N3D4 1523 aa-0.23□□□□□ -2.45
RPL39P39-201ENST00000455840 CC2D2AQ9P2K1 1620 aa-0.23□□□□□ -2.45
RPL39P39-201ENST00000455840 TOPAZ1Q8N9V7 1692 aa-0.23□□□□□ -2.45
RPL39P39-201ENST00000455840 MARF1Q9Y4F3 1742 aaKnown RBP-0.23□□□□□ -2.45
RPL39P39-201ENST00000455840 PAPPA2Q9BXP8 1791 aa-0.23□□□□□ -2.45
RPL39P39-201ENST00000455840 TRBV6-1A0A0K0K1D8 114 aa-0.23□□□□□ -2.45
RPL39P39-201ENST00000455840 UBE2L5PA0A1B0GUS4 154 aa-0.23□□□□□ -2.45
RPL39P39-201ENST00000455840 CHKB-CPT1BH3BT56 60 aa-0.23□□□□□ -2.45
RPL39P39-201ENST00000455840 CFDP00746 253 aaPredicted RBP-0.23□□□□□ -2.45
RPL39P39-201ENST00000455840 IFNGP01579 166 aa-0.23□□□□□ -2.45
RPL39P39-201ENST00000455840 IGLC1P0CG04 106 aa-0.23□□□□□ -2.45
RPL39P39-201ENST00000455840 IFITM1P13164 125 aa-0.23□□□□□ -2.45
RPL39P39-201ENST00000455840 SPRR1BP22528 89 aa-0.23□□□□□ -2.45
RPL39P39-201ENST00000455840 SPRR2BP35325 72 aa-0.23□□□□□ -2.45
RPL39P39-201ENST00000455840 UBE2D3P61077 147 aa-0.23□□□□□ -2.45
RPL39P39-201ENST00000455840 UBE2D2P62837 147 aa-0.23□□□□□ -2.45
RPL39P39-201ENST00000455840 UBE2L3P68036 154 aaKnown RBP-0.23□□□□□ -2.45
RPL39P39-201ENST00000455840 KRTAP6-1Q3LI64 71 aa-0.23□□□□□ -2.45
RPL39P39-201ENST00000455840 C9orf153Q5TBE3 101 aa-0.23□□□□□ -2.45
RPL39P39-201ENST00000455840 NXT2Q9NPJ8 142 aaKnown RBP-0.23□□□□□ -2.45
RPL39P39-201ENST00000455840 KTN1Q86UP2 1357 aaKnown RBP-0.23□□□□□ -2.45
RPL39P39-201ENST00000455840 SCAPERQ9BY12 1400 aa-0.23□□□□□ -2.45
RPL39P39-201ENST00000455840 NCOA3Q9Y6Q9 1424 aa-0.23□□□□□ -2.45
RPL39P39-201ENST00000455840 PZPP20742 1482 aa-0.23□□□□□ -2.45
RPL39P39-201ENST00000455840 MAPKBP1O60336 1514 aa-0.23□□□□□ -2.45
RPL39P39-201ENST00000455840 NRKQ7Z2Y5 1582 aa-0.23□□□□□ -2.45
RPL39P39-201ENST00000455840 APC2O95996 2303 aa-0.24□□□□□ -2.45
RPL39P39-201ENST00000455840 EP300Q09472 2414 aaPredicted RBP-0.24□□□□□ -2.45
RPL39P39-201ENST00000455840 HECTD4Q9Y4D8 3996 aa-0.24□□□□□ -2.45
RPL39P39-201ENST00000455840 ZFHX3Q15911 3703 aa-0.24□□□□□ -2.45
RPL39P39-201ENST00000455840 LINC00959A0A1B0GUT2 108 aa-0.24□□□□□ -2.45
RPL39P39-201ENST00000455840 H3BQ15 152 aa-0.24□□□□□ -2.45
RPL39P39-201ENST00000455840 C10orf113Q5VZT2 155 aa-0.24□□□□□ -2.45
RPL39P39-201ENST00000455840 GAPVD1Q14C86 1478 aa-0.24□□□□□ -2.45
RPL39P39-201ENST00000455840 ARHGEF12Q9NZN5 1544 aa-0.24□□□□□ -2.45
RPL39P39-201ENST00000455840 EIF4G3O43432 1585 aaKnown RBP-0.24□□□□□ -2.45
RPL39P39-201ENST00000455840 KIAA0556O60303 1618 aa-0.24□□□□□ -2.45
RPL39P39-201ENST00000455840 SETXQ7Z333 2677 aaKnown RBP-0.25□□□□□ -2.45
RPL39P39-201ENST00000455840 F6UZH7 168 aa-0.25□□□□□ -2.45
RPL39P39-201ENST00000455840 APOC3P02656 99 aa-0.25□□□□□ -2.45
RPL39P39-201ENST00000455840 COX6B1P14854 86 aa-0.25□□□□□ -2.45
RPL39P39-201ENST00000455840 GNG4P50150 75 aa-0.25□□□□□ -2.45
RPL39P39-201ENST00000455840 ATP5EP56381 51 aaPredicted RBP-0.25□□□□□ -2.45
RPL39P39-201ENST00000455840 DCDP81605 110 aaKnown RBP-0.25□□□□□ -2.45
RPL39P39-201ENST00000455840 Q0VG73 95 aa-0.25□□□□□ -2.45
RPL39P39-201ENST00000455840 FAM223AQ8IWN6 122 aa-0.25□□□□□ -2.45
RPL39P39-201ENST00000455840 LINC00846Q9NV44 126 aa-0.25□□□□□ -2.45
RPL39P39-201ENST00000455840 C1orf167Q5SNV9 1468 aa-0.25□□□□□ -2.45
RPL39P39-201ENST00000455840 ARHGAP5Q13017 1502 aa-0.25□□□□□ -2.45
RPL39P39-201ENST00000455840 ZFYVE16Q7Z3T8 1539 aa-0.25□□□□□ -2.45
RPL39P39-201ENST00000455840 A0A0G2JMZ2 1700 aa-0.25□□□□□ -2.45
RPL39P39-201ENST00000455840 XRN1Q8IZH2 1706 aaKnown RBP-0.25□□□□□ -2.45
RPL39P39-201ENST00000455840 FMN2Q9NZ56 1722 aa-0.25□□□□□ -2.45
RPL39P39-201ENST00000455840 SRRM2Q9UQ35 2752 aaKnown RBP-0.26□□□□□ -2.45
RPL39P39-201ENST00000455840 TOP2BQ02880 1626 aa-0.26□□□□□ -2.45
RPL39P39-201ENST00000455840 FAM135AQ9P2D6 1515 aa-0.26□□□□□ -2.45
RPL39P39-201ENST00000455840 WDR7Q9Y4E6 1490 aa-0.26□□□□□ -2.45
RPL39P39-201ENST00000455840 ABCC5O15440 1437 aa-0.26□□□□□ -2.45
RPL39P39-201ENST00000455840 FAM24AA6NFZ4 105 aa-0.26□□□□□ -2.45
RPL39P39-201ENST00000455840 K7EQZ3 153 aa-0.26□□□□□ -2.45
RPL39P39-201ENST00000455840 MGPP08493 103 aa-0.26□□□□□ -2.45
RPL39P39-201ENST00000455840 PPP3R1P63098 170 aa-0.26□□□□□ -2.45
RPL39P39-201ENST00000455840 PIGYQ3MUY2 71 aa-0.26□□□□□ -2.45
RPL39P39-201ENST00000455840 LCN9Q8WX39 176 aa-0.26□□□□□ -2.45
RPL39P39-201ENST00000455840 ARL2-SNX15V9GYD0 113 aa-0.26□□□□□ -2.45
RPL39P39-201ENST00000455840 MAP1AP78559 2803 aaPredicted RBP-0.26□□□□□ -2.45
RPL39P39-201ENST00000455840 FLNBO75369 2602 aaKnown RBP-0.26□□□□□ -2.45
RPL39P39-201ENST00000455840 KIAA1551Q9HCM1 1747 aa-0.27□□□□□ -2.45
RPL39P39-201ENST00000455840 SHPRHQ149N8 1683 aa-0.27□□□□□ -2.45
RPL39P39-201ENST00000455840 MACF1Q9UPN3 7388 aaKnown RBP-0.27□□□□□ -2.45
RPL39P39-201ENST00000455840 ACANP16112 2415 aa-0.27□□□□□ -2.45
RPL39P39-201ENST00000455840 FAM223BA6NKX1 122 aa-0.27□□□□□ -2.45
RPL39P39-201ENST00000455840 S100A3P33764 101 aa-0.27□□□□□ -2.45
RPL39P39-201ENST00000455840 GNG11P61952 73 aa-0.27□□□□□ -2.45
RPL39P39-201ENST00000455840 SARNPP82979 210 aaKnown RBP-0.27□□□□□ -2.45
RPL39P39-201ENST00000455840 TMEM203Q969S6 136 aa-0.27□□□□□ -2.45
RPL39P39-201ENST00000455840 PEG3Q9GZU2 1588 aa-0.28□□□□□ -2.45
RPL39P39-201ENST00000455840 SLIT1O75093 1534 aa-0.28□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms