RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 MALP21145 153 aa11.09□□□□□ -0.63
USP39-208ENST00000455732 TMEM141Q96I45 108 aa11.09□□□□□ -0.63
USP39-208ENST00000455732 ALKBH7Q9BT30 221 aaPredicted RBP11.09□□□□□ -0.63
USP39-208ENST00000455732 IGHV3OR16-9A0A0B4J2B5 98 aa11.08□□□□□ -0.64
USP39-208ENST00000455732 PANO1I0J062 215 aa11.08□□□□□ -0.64
USP39-208ENST00000455732 G0S2P27469 103 aa11.08□□□□□ -0.64
USP39-208ENST00000455732 LINC01546A6NGU7 62 aa11.07□□□□□ -0.64
USP39-208ENST00000455732 IGIPA6NJ69 53 aa11.07□□□□□ -0.64
USP39-208ENST00000455732 ZNF561-AS1K7EIQ3 104 aa11.07□□□□□ -0.64
USP39-208ENST00000455732 APOMO95445 188 aa11.07□□□□□ -0.64
USP39-208ENST00000455732 MRPL18Q9H0U6 180 aaKnown RBP11.07□□□□□ -0.64
USP39-208ENST00000455732 KRTAP10-4P60372 401 aaPredicted RBP11.06□□□□□ -0.64
USP39-208ENST00000455732 TEX43Q6ZNM6 134 aa11.06□□□□□ -0.64
USP39-208ENST00000455732 C5orf38Q86SI9 138 aa11.06□□□□□ -0.64
USP39-208ENST00000455732 SPACA4Q8TDM5 124 aa11.06□□□□□ -0.64
USP39-208ENST00000455732 LINC00526Q96FQ7 95 aa11.06□□□□□ -0.64
USP39-208ENST00000455732 CARD19Q96LW7 228 aa11.06□□□□□ -0.64
USP39-208ENST00000455732 PKIGQ9Y2B9 76 aa11.06□□□□□ -0.64
USP39-208ENST00000455732 TGIF2-C20orf24A0A0A6YYL0 155 aa11.05□□□□□ -0.64
USP39-208ENST00000455732 COX6A2Q02221 97 aa11.05□□□□□ -0.64
USP39-208ENST00000455732 FABP9Q0Z7S8 132 aa11.05□□□□□ -0.64
USP39-208ENST00000455732 Q6ZN92 141 aa11.05□□□□□ -0.64
USP39-208ENST00000455732 LINC00173Q6ZV60 143 aa11.05□□□□□ -0.64
USP39-208ENST00000455732 OR10D4PQ8NGN7 298 aa11.05□□□□□ -0.64
USP39-208ENST00000455732 PRSS3P2Q8NHM4 247 aa11.05□□□□□ -0.64
USP39-208ENST00000455732 TOMM6Q96B49 74 aa11.05□□□□□ -0.64
USP39-208ENST00000455732 AMELXQ99217 191 aa11.05□□□□□ -0.64
USP39-208ENST00000455732 IGLV4-69A0A075B6H9 119 aa11.04□□□□□ -0.64
USP39-208ENST00000455732 UBE2D1P51668 147 aa11.04□□□□□ -0.64
USP39-208ENST00000455732 SYCNQ0VAF6 134 aa11.04□□□□□ -0.64
USP39-208ENST00000455732 LINC00242Q5T6M2 205 aa11.04□□□□□ -0.64
USP39-208ENST00000455732 C2orf48Q96LS8 159 aa11.04□□□□□ -0.64
USP39-208ENST00000455732 TIMM17AQ99595 171 aa11.04□□□□□ -0.64
USP39-208ENST00000455732 C2orf88Q9BSF0 95 aa11.04□□□□□ -0.64
USP39-208ENST00000455732 CHTF8P0CG12 524 aa11.03□□□□□ -0.64
USP39-208ENST00000455732 PAPPA-AS1Q5QFB9 102 aa11.03□□□□□ -0.64
USP39-208ENST00000455732 VCX2Q9H322 139 aa11.03□□□□□ -0.64
USP39-208ENST00000455732 LINC01549A6NIU2 74 aa11.02□□□□□ -0.65
USP39-208ENST00000455732 SPAG11BQ08648 103 aa11.02□□□□□ -0.65
USP39-208ENST00000455732 TRAPPC1Q9Y5R8 145 aa11.02□□□□□ -0.65
USP39-208ENST00000455732 A0A087WZ39 114 aa11.01□□□□□ -0.65
USP39-208ENST00000455732 F8WDY8 70 aa11.01□□□□□ -0.65
USP39-208ENST00000455732 J3QL48 77 aa11.01□□□□□ -0.65
USP39-208ENST00000455732 FAM19A3Q7Z5A8 133 aa11.01□□□□□ -0.65
USP39-208ENST00000455732 YPEL4Q96NS1 127 aa11.01□□□□□ -0.65
USP39-208ENST00000455732 A0A087WYN8 130 aa11□□□□□ -0.65
USP39-208ENST00000455732 Q6ZRU5 148 aa11□□□□□ -0.65
USP39-208ENST00000455732 ERASQ7Z444 233 aa11□□□□□ -0.65
USP39-208ENST00000455732 ORAOV1Q8WV07 137 aa11□□□□□ -0.65
USP39-208ENST00000455732 CAMK2N2Q96S95 79 aa11□□□□□ -0.65
USP39-208ENST00000455732 PLAC8Q9NZF1 115 aa11□□□□□ -0.65
USP39-208ENST00000455732 LINC00474Q9P2X8 69 aa11□□□□□ -0.65
USP39-208ENST00000455732 A0A096LNI7 61 aa10.99□□□□□ -0.65
USP39-208ENST00000455732 ZC2HC1BQ5TFG8 222 aa10.99□□□□□ -0.65
USP39-208ENST00000455732 FA2HQ7L5A8 372 aa10.99□□□□□ -0.65
USP39-208ENST00000455732 LINC01561Q8N1V8 128 aa10.99□□□□□ -0.65
USP39-208ENST00000455732 IGKV2-24A0A0C4DH68 120 aa10.98□□□□□ -0.65
USP39-208ENST00000455732 SCGB3A1Q96QR1 104 aa10.98□□□□□ -0.65
USP39-208ENST00000455732 SMCO4Q9NRQ5 59 aa10.98□□□□□ -0.65
USP39-208ENST00000455732 SEC11AP67812 179 aa10.97□□□□□ -0.65
USP39-208ENST00000455732 RNF151Q2KHN1 245 aa10.97□□□□□ -0.65
USP39-208ENST00000455732 MAJINQ3KP22 176 aa10.97□□□□□ -0.65
USP39-208ENST00000455732 C18orf32Q8TCD1 76 aa10.97□□□□□ -0.65
USP39-208ENST00000455732 DPH3Q96FX2 82 aa10.97□□□□□ -0.65
USP39-208ENST00000455732 MRPL35Q9NZE8 188 aaKnown RBP10.97□□□□□ -0.65
USP39-208ENST00000455732 LOC107984640A0A0U1RRK4 108 aa10.96□□□□□ -0.65
USP39-208ENST00000455732 PKHD1L1Q86WI1 4243 aa10.96□□□□□ -0.66
USP39-208ENST00000455732 NDUFA1O15239 70 aa10.95□□□□□ -0.66
USP39-208ENST00000455732 RPL37AP61513 92 aaKnown RBP10.95□□□□□ -0.66
USP39-208ENST00000455732 HERVK_113P63121 156 aa10.95□□□□□ -0.66
USP39-208ENST00000455732 KIAA0087Q14695 138 aa10.95□□□□□ -0.66
USP39-208ENST00000455732 LRP1Q07954 4544 aaKnown RBP10.95□□□□□ -0.66
USP39-208ENST00000455732 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.94□□□□□ -0.66
USP39-208ENST00000455732 PTTG1IPP53801 180 aa10.94□□□□□ -0.66
USP39-208ENST00000455732 STPG4Q8N801 248 aa10.94□□□□□ -0.66
USP39-208ENST00000455732 URB1-AS1Q96HZ7 61 aa10.94□□□□□ -0.66
USP39-208ENST00000455732 KRTAP29-1A8MX34 341 aaPredicted RBP10.93□□□□□ -0.66
USP39-208ENST00000455732 LINC00614P0C842 121 aa10.93□□□□□ -0.66
USP39-208ENST00000455732 CBLN2Q8IUK8 224 aa10.93□□□□□ -0.66
USP39-208ENST00000455732 SLC7A5P1Q8MH63 180 aa10.93□□□□□ -0.66
USP39-208ENST00000455732 A0A096LNJ9 63 aa10.92□□□□□ -0.66
USP39-208ENST00000455732 RAB5BP61020 215 aa10.91□□□□□ -0.66
USP39-208ENST00000455732 C10orf25Q5T742 122 aa10.91□□□□□ -0.66
USP39-208ENST00000455732 CST9LQ9H4G1 147 aa10.91□□□□□ -0.66
USP39-208ENST00000455732 GEMIN7Q9H840 131 aaKnown RBP10.91□□□□□ -0.66
USP39-208ENST00000455732 FAT3Q8TDW7 4589 aa10.91□□□□□ -0.66
USP39-208ENST00000455732 A0A0J9YXV3 536 aa10.9□□□□□ -0.66
USP39-208ENST00000455732 TINCRA0A1B0GVN0 87 aa10.9□□□□□ -0.66
USP39-208ENST00000455732 HBDP02042 147 aa10.9□□□□□ -0.66
USP39-208ENST00000455732 TLX1NBP0CAT3 122 aa10.9□□□□□ -0.66
USP39-208ENST00000455732 GAGE2BQ13066 116 aa10.9□□□□□ -0.66
USP39-208ENST00000455732 PMVKQ15126 192 aa10.9□□□□□ -0.66
USP39-208ENST00000455732 UNQ6190/PRO20217Q6UXQ8 127 aa10.9□□□□□ -0.66
USP39-208ENST00000455732 C7orf33Q8WU49 177 aa10.9□□□□□ -0.66
USP39-208ENST00000455732 C6orf48Q9UBA6 75 aa10.9□□□□□ -0.66
USP39-208ENST00000455732 CDKN2A-AS1Q9UH64 79 aa10.9□□□□□ -0.66
USP39-208ENST00000455732 IGLV5-45A0A087WSX0 123 aa10.89□□□□□ -0.67
USP39-208ENST00000455732 TRBV30A0A0K0K1B3 111 aa10.89□□□□□ -0.67
USP39-208ENST00000455732 HNRNPA3P51991 378 aaKnown RBP10.89□□□□□ -0.67
USP39-208ENST00000455732 RPL18AQ02543 176 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms