RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 DGAT2L7PQ6IED9 249 aa7.53□□□□□ -1.2
PKP4-206ENST00000452162 C10orf126Q8N4M7 172 aa7.53□□□□□ -1.2
PKP4-206ENST00000452162 HERV-K104P63124 156 aa7.53□□□□□ -1.2
PKP4-206ENST00000452162 VSIG2Q96IQ7 327 aa7.53□□□□□ -1.2
PKP4-206ENST00000452162 SPATA25Q9BR10 227 aa7.53□□□□□ -1.2
PKP4-206ENST00000452162 SCGB1A1P11684 91 aa7.52□□□□□ -1.21
PKP4-206ENST00000452162 APOC4P55056 127 aa7.52□□□□□ -1.21
PKP4-206ENST00000452162 FAM19A3Q7Z5A8 133 aa7.52□□□□□ -1.21
PKP4-206ENST00000452162 GEMIN7Q9H840 131 aaKnown RBP7.52□□□□□ -1.21
PKP4-206ENST00000452162 SMIM9A6NGZ8 99 aa7.52□□□□□ -1.21
PKP4-206ENST00000452162 SPINK8P0C7L1 97 aa7.52□□□□□ -1.21
PKP4-206ENST00000452162 DEFB135Q30KP9 77 aa7.52□□□□□ -1.21
PKP4-206ENST00000452162 TMEM243Q9BU79 118 aa7.52□□□□□ -1.21
PKP4-206ENST00000452162 A0A0J9YXY3 114 aa7.51□□□□□ -1.21
PKP4-206ENST00000452162 CDKN2A-AS1Q9UH64 79 aa7.51□□□□□ -1.21
PKP4-206ENST00000452162 SMAGPQ0VAQ4 97 aa7.51□□□□□ -1.21
PKP4-206ENST00000452162 LINC00242Q5T6M2 205 aa7.51□□□□□ -1.21
PKP4-206ENST00000452162 CDC42SE2Q9NRR3 84 aa7.51□□□□□ -1.21
PKP4-206ENST00000452162 COX6A2Q02221 97 aa7.5□□□□□ -1.21
PKP4-206ENST00000452162 H7C423 109 aa7.49□□□□□ -1.21
PKP4-206ENST00000452162 DEFB130BP0DP73 79 aa7.49□□□□□ -1.21
PKP4-206ENST00000452162 DEFB130AP0DP74 79 aa7.49□□□□□ -1.21
PKP4-206ENST00000452162 HERVK_113P63121 156 aa7.49□□□□□ -1.21
PKP4-206ENST00000452162 LITAFQ99732 161 aa7.49□□□□□ -1.21
PKP4-206ENST00000452162 NDUFA12Q9UI09 145 aa7.49□□□□□ -1.21
PKP4-206ENST00000452162 UBE2L6O14933 153 aa7.49□□□□□ -1.21
PKP4-206ENST00000452162 ZFAND6Q6FIF0 208 aa7.49□□□□□ -1.21
PKP4-206ENST00000452162 DNAH7Q8WXX0 4024 aa7.48□□□□□ -1.21
PKP4-206ENST00000452162 CFC1BP0CG36 223 aa7.48□□□□□ -1.21
PKP4-206ENST00000452162 CFC1P0CG37 223 aa7.48□□□□□ -1.21
PKP4-206ENST00000452162 RNF183Q96D59 192 aa7.48□□□□□ -1.21
PKP4-206ENST00000452162 IGLV5-39A0A0G2JS06 123 aa7.48□□□□□ -1.21
PKP4-206ENST00000452162 TMEM101Q96IK0 257 aa7.48□□□□□ -1.21
PKP4-206ENST00000452162 TRBV6-8A0A0A6YYG3 113 aa7.47□□□□□ -1.21
PKP4-206ENST00000452162 APOMO95445 188 aa7.47□□□□□ -1.21
PKP4-206ENST00000452162 TSPAN13O95857 204 aa7.47□□□□□ -1.21
PKP4-206ENST00000452162 TRAV13-1A0A0B4J241 112 aa7.47□□□□□ -1.21
PKP4-206ENST00000452162 LYRM9A8MSI8 78 aa7.47□□□□□ -1.21
PKP4-206ENST00000452162 MUSTN1Q8IVN3 82 aa7.47□□□□□ -1.21
PKP4-206ENST00000452162 NDUFA1O15239 70 aa7.46□□□□□ -1.21
PKP4-206ENST00000452162 EIF4EBP3O60516 100 aaPredicted RBP7.46□□□□□ -1.21
PKP4-206ENST00000452162 FAM222AQ5U5X8 452 aa7.46□□□□□ -1.21
PKP4-206ENST00000452162 SPANXDQ9BXN6 97 aa7.46□□□□□ -1.21
PKP4-206ENST00000452162 SPANXCQ9NY87 97 aa7.46□□□□□ -1.21
PKP4-206ENST00000452162 SMIM1B2RUZ4 78 aa7.46□□□□□ -1.22
PKP4-206ENST00000452162 F5H768 121 aa7.46□□□□□ -1.22
PKP4-206ENST00000452162 CKS1BP61024 79 aa7.46□□□□□ -1.22
PKP4-206ENST00000452162 RPL24P83731 157 aaKnown RBP7.46□□□□□ -1.22
PKP4-206ENST00000452162 GAGE6Q13070 117 aa7.46□□□□□ -1.22
PKP4-206ENST00000452162 GYPEP15421 78 aa7.45□□□□□ -1.22
PKP4-206ENST00000452162 ADAMTSL4-AS1Q5T5F5 129 aa7.45□□□□□ -1.22
PKP4-206ENST00000452162 IGHV4-28A0A0C4DH34 117 aa7.45□□□□□ -1.22
PKP4-206ENST00000452162 TIMM17BO60830 172 aa7.45□□□□□ -1.22
PKP4-206ENST00000452162 WWC2-AS2Q96NR7 200 aa7.45□□□□□ -1.22
PKP4-206ENST00000452162 PRO1854Q9UHT4 67 aa7.45□□□□□ -1.22
PKP4-206ENST00000452162 IGLV4-60A0A075B6I1 120 aa7.44□□□□□ -1.22
PKP4-206ENST00000452162 A0A0B4J2C4 111 aa7.44□□□□□ -1.22
PKP4-206ENST00000452162 MIAQ16674 131 aa7.44□□□□□ -1.22
PKP4-206ENST00000452162 PRO0255Q9UI72 69 aa7.44□□□□□ -1.22
PKP4-206ENST00000452162 Q8NAQ8 132 aa7.44□□□□□ -1.22
PKP4-206ENST00000452162 ATP6V0E2Q8NHE4 81 aa7.44□□□□□ -1.22
PKP4-206ENST00000452162 CHCHD5Q9BSY4 110 aa7.44□□□□□ -1.22
PKP4-206ENST00000452162 CSMD3Q7Z407 3707 aa7.43□□□□□ -1.22
PKP4-206ENST00000452162 A0A0J9YWU9 116 aa7.43□□□□□ -1.22
PKP4-206ENST00000452162 H3BMG7 143 aa7.43□□□□□ -1.22
PKP4-206ENST00000452162 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.42□□□□□ -1.22
PKP4-206ENST00000452162 DEFB4AO15263 64 aa7.42□□□□□ -1.22
PKP4-206ENST00000452162 IGHV3-33P01772 117 aa7.42□□□□□ -1.22
PKP4-206ENST00000452162 MIFP14174 115 aa7.42□□□□□ -1.22
PKP4-206ENST00000452162 PRO0461Q9UI25 63 aa7.42□□□□□ -1.22
PKP4-206ENST00000452162 STARD9Q9P2P6 4700 aa7.42□□□□□ -1.22
PKP4-206ENST00000452162 ZNF625Q96I27 306 aaPredicted RBP7.41□□□□□ -1.22
PKP4-206ENST00000452162 Q9H8V8 135 aa7.41□□□□□ -1.22
PKP4-206ENST00000452162 LOC107984156A0A0G2JMH3 177 aa7.41□□□□□ -1.22
PKP4-206ENST00000452162 F8W1H4 67 aa7.41□□□□□ -1.22
PKP4-206ENST00000452162 PAX4O43316 350 aa7.41□□□□□ -1.22
PKP4-206ENST00000452162 PRSS2P07478 247 aa7.41□□□□□ -1.22
PKP4-206ENST00000452162 SFTA2Q6UW10 78 aa7.41□□□□□ -1.22
PKP4-206ENST00000452162 ARL17AQ8IVW1 177 aa7.41□□□□□ -1.22
PKP4-206ENST00000452162 CELA1Q9UNI1 258 aa7.41□□□□□ -1.22
PKP4-206ENST00000452162 LYRM7Q5U5X0 104 aa7.4□□□□□ -1.22
PKP4-206ENST00000452162 SS18L2Q9UHA2 77 aa7.4□□□□□ -1.22
PKP4-206ENST00000452162 IFITM1P13164 125 aa7.4□□□□□ -1.23
PKP4-206ENST00000452162 DAD1P61803 113 aa7.4□□□□□ -1.23
PKP4-206ENST00000452162 WFDC2Q14508 124 aa7.4□□□□□ -1.23
PKP4-206ENST00000452162 ERG28Q9UKR5 140 aa7.39□□□□□ -1.23
PKP4-206ENST00000452162 IGHV3OR16-9A0A0B4J2B5 98 aa7.39□□□□□ -1.23
PKP4-206ENST00000452162 IGKV3OR2-268A0A0C4DH90 116 aa7.39□□□□□ -1.23
PKP4-206ENST00000452162 A0A1B0GUV1 79 aa7.39□□□□□ -1.23
PKP4-206ENST00000452162 MUC7Q8TAX7 377 aa7.39□□□□□ -1.23
PKP4-206ENST00000452162 TENM2Q9NT68 2774 aa7.38□□□□□ -1.23
PKP4-206ENST00000452162 A0A096LPF7 62 aa7.38□□□□□ -1.23
PKP4-206ENST00000452162 PSMB2P49721 201 aa7.38□□□□□ -1.23
PKP4-206ENST00000452162 NPC2P61916 151 aa7.38□□□□□ -1.23
PKP4-206ENST00000452162 CIRBPQ14011 172 aaKnown RBP7.38□□□□□ -1.23
PKP4-206ENST00000452162 DAND5Q8N907 189 aa7.38□□□□□ -1.23
PKP4-206ENST00000452162 C11orf68Q9H3H3 251 aaKnown RBP7.38□□□□□ -1.23
PKP4-206ENST00000452162 LINC00959A0A1B0GUT2 108 aa7.38□□□□□ -1.23
PKP4-206ENST00000452162 TCL1BO95988 128 aa7.38□□□□□ -1.23
PKP4-206ENST00000452162 ATP5G1P05496 136 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 207.5 ms