RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 KRTAP10-11P60412 298 aa4.09□□□□□ -1.76
CDC42BPA-209ENST00000448940 PATE2Q6UY27 113 aa4.09□□□□□ -1.76
CDC42BPA-209ENST00000448940 SPINT4Q6UDR6 99 aa4.08□□□□□ -1.76
CDC42BPA-209ENST00000448940 HIST1H2BLQ99880 126 aa4.08□□□□□ -1.76
CDC42BPA-209ENST00000448940 SZT2Q5T011 3432 aa4.08□□□□□ -1.76
CDC42BPA-209ENST00000448940 LCE6AA0A183 80 aa4.08□□□□□ -1.76
CDC42BPA-209ENST00000448940 ATOX1O00244 68 aa4.08□□□□□ -1.76
CDC42BPA-209ENST00000448940 GNB1LQ9BYB4 327 aa4.08□□□□□ -1.76
CDC42BPA-209ENST00000448940 TENM4Q6N022 2769 aa4.08□□□□□ -1.76
CDC42BPA-209ENST00000448940 NDUFB1O75438 58 aa4.08□□□□□ -1.76
CDC42BPA-209ENST00000448940 RPL23P62829 140 aaKnown RBP4.08□□□□□ -1.76
CDC42BPA-209ENST00000448940 DCANP1Q8TF63 244 aa4.08□□□□□ -1.76
CDC42BPA-209ENST00000448940 CCL25O15444 150 aa4.07□□□□□ -1.76
CDC42BPA-209ENST00000448940 ETDBQ3ZM63 59 aa4.07□□□□□ -1.76
CDC42BPA-209ENST00000448940 Q5BKY6 102 aa4.07□□□□□ -1.76
CDC42BPA-209ENST00000448940 SERP2Q8N6R1 65 aa4.07□□□□□ -1.76
CDC42BPA-209ENST00000448940 CYTL1Q9NRR1 136 aa4.07□□□□□ -1.76
CDC42BPA-209ENST00000448940 TRIOO75962 3097 aa4.07□□□□□ -1.76
CDC42BPA-209ENST00000448940 SRP19P09132 144 aaKnown RBP4.07□□□□□ -1.76
CDC42BPA-209ENST00000448940 C9orf62Q8N4C0 152 aa4.07□□□□□ -1.76
CDC42BPA-209ENST00000448940 MYMXA0A1B0GTQ4 84 aa4.07□□□□□ -1.76
CDC42BPA-209ENST00000448940 GDF5OSQ5U4N7 250 aa4.07□□□□□ -1.76
CDC42BPA-209ENST00000448940 ZFP2Q6ZN57 461 aa4.07□□□□□ -1.76
CDC42BPA-209ENST00000448940 LINC00315P59091 139 aa4.07□□□□□ -1.76
CDC42BPA-209ENST00000448940 J3QQQ9 107 aa4.07□□□□□ -1.76
CDC42BPA-209ENST00000448940 IGLC2P0DOY2 106 aa4.07□□□□□ -1.76
CDC42BPA-209ENST00000448940 TIMM21Q9BVV7 248 aa4.07□□□□□ -1.76
CDC42BPA-209ENST00000448940 PPDPFQ9H3Y8 114 aa4.07□□□□□ -1.76
CDC42BPA-209ENST00000448940 ORMDL1Q9P0S3 153 aa4.07□□□□□ -1.76
CDC42BPA-209ENST00000448940 K7EP13 123 aa4.06□□□□□ -1.76
CDC42BPA-209ENST00000448940 PLA2G2DQ9UNK4 145 aa4.06□□□□□ -1.76
CDC42BPA-209ENST00000448940 HERVK_113P63121 156 aa4.06□□□□□ -1.76
CDC42BPA-209ENST00000448940 DSCR8Q96T75 97 aa4.06□□□□□ -1.76
CDC42BPA-209ENST00000448940 BRWD1-AS2P59051 145 aa4.06□□□□□ -1.76
CDC42BPA-209ENST00000448940 IL15RAQ13261 267 aa4.06□□□□□ -1.76
CDC42BPA-209ENST00000448940 TYMSOSQ8TAI1 123 aa4.06□□□□□ -1.76
CDC42BPA-209ENST00000448940 DAND5Q8N907 189 aa4.06□□□□□ -1.76
CDC42BPA-209ENST00000448940 GFRA4Q9GZZ7 299 aa4.06□□□□□ -1.76
CDC42BPA-209ENST00000448940 MED14OSP0DP75 135 aa4.06□□□□□ -1.76
CDC42BPA-209ENST00000448940 FAM104BQ5XKR9 115 aa4.06□□□□□ -1.76
CDC42BPA-209ENST00000448940 HIST3H2BBQ8N257 126 aa4.06□□□□□ -1.76
CDC42BPA-209ENST00000448940 CHCHD7Q9BUK0 85 aa4.06□□□□□ -1.76
CDC42BPA-209ENST00000448940 PLEKHB2Q96CS7 222 aa4.05□□□□□ -1.76
CDC42BPA-209ENST00000448940 UNC80Q8N2C7 3258 aa4.05□□□□□ -1.76
CDC42BPA-209ENST00000448940 C2orf66Q6UXQ4 117 aa4.05□□□□□ -1.76
CDC42BPA-209ENST00000448940 TMEM170AQ8WVE7 144 aa4.05□□□□□ -1.76
CDC42BPA-209ENST00000448940 TNRC18O15417 2968 aaPredicted RBP4.05□□□□□ -1.76
CDC42BPA-209ENST00000448940 ZC2HC1BQ5TFG8 222 aa4.05□□□□□ -1.76
CDC42BPA-209ENST00000448940 CRIP3Q6Q6R5 217 aa4.05□□□□□ -1.76
CDC42BPA-209ENST00000448940 TM2D3Q9BRN9 247 aa4.05□□□□□ -1.76
CDC42BPA-209ENST00000448940 HIVEP1P15822 2718 aa4.05□□□□□ -1.76
CDC42BPA-209ENST00000448940 LOC105371267A0A1B0GV96 52 aa4.05□□□□□ -1.76
CDC42BPA-209ENST00000448940 TIMM17BO60830 172 aa4.05□□□□□ -1.76
CDC42BPA-209ENST00000448940 CHCHD10Q8WYQ3 142 aaPredicted RBP4.05□□□□□ -1.76
CDC42BPA-209ENST00000448940 CXCL1P09341 107 aa4.05□□□□□ -1.76
CDC42BPA-209ENST00000448940 C12orf74Q32Q52 190 aa4.05□□□□□ -1.76
CDC42BPA-209ENST00000448940 NTN5Q8WTR8 489 aaPredicted RBP4.05□□□□□ -1.76
CDC42BPA-209ENST00000448940 STAB2Q8WWQ8 2551 aa4.04□□□□□ -1.76
CDC42BPA-209ENST00000448940 EIF4EBP3O60516 100 aaPredicted RBP4.04□□□□□ -1.76
CDC42BPA-209ENST00000448940 LTAP01374 205 aa4.04□□□□□ -1.76
CDC42BPA-209ENST00000448940 CYYR1Q96J86 154 aa4.04□□□□□ -1.76
CDC42BPA-209ENST00000448940 OPRPNQ99935 248 aaPredicted RBP4.04□□□□□ -1.76
CDC42BPA-209ENST00000448940 HIST1H2BKO60814 126 aa4.04□□□□□ -1.76
CDC42BPA-209ENST00000448940 HIST1H2BJP06899 126 aa4.04□□□□□ -1.76
CDC42BPA-209ENST00000448940 ATRAIDQ6UW56 229 aa4.04□□□□□ -1.76
CDC42BPA-209ENST00000448940 C20orf78Q9BR46 151 aa4.04□□□□□ -1.76
CDC42BPA-209ENST00000448940 C19orf71A6NCJ1 209 aa4.04□□□□□ -1.76
CDC42BPA-209ENST00000448940 SMKR1H3BMG3 65 aa4.04□□□□□ -1.76
CDC42BPA-209ENST00000448940 TCL1BO95988 128 aa4.04□□□□□ -1.76
CDC42BPA-209ENST00000448940 IGLV4-69A0A075B6H9 119 aa4.04□□□□□ -1.76
CDC42BPA-209ENST00000448940 TMEM141Q96I45 108 aa4.04□□□□□ -1.76
CDC42BPA-209ENST00000448940 NSD1Q96L73 2696 aaPredicted RBP4.04□□□□□ -1.76
CDC42BPA-209ENST00000448940 P0C879 139 aa4.04□□□□□ -1.76
CDC42BPA-209ENST00000448940 COX6A2Q02221 97 aa4.04□□□□□ -1.76
CDC42BPA-209ENST00000448940 IMUPQ9GZP8 106 aa4.04□□□□□ -1.76
CDC42BPA-209ENST00000448940 IGKCP01834 107 aa4.04□□□□□ -1.76
CDC42BPA-209ENST00000448940 KRTAP10-3P60369 221 aa4.04□□□□□ -1.76
CDC42BPA-209ENST00000448940 TRBV6-1A0A0K0K1D8 114 aa4.03□□□□□ -1.76
CDC42BPA-209ENST00000448940 H0Y9J4 135 aa4.03□□□□□ -1.76
CDC42BPA-209ENST00000448940 IGKV4-1P06312 121 aa4.03□□□□□ -1.76
CDC42BPA-209ENST00000448940 TP53TG3Q9ULZ0 132 aa4.03□□□□□ -1.76
CDC42BPA-209ENST00000448940 TRBV6-8A0A0A6YYG3 113 aa4.03□□□□□ -1.76
CDC42BPA-209ENST00000448940 A0A0B4J2C4 111 aa4.03□□□□□ -1.76
CDC42BPA-209ENST00000448940 K7ERJ3 54 aa4.03□□□□□ -1.76
CDC42BPA-209ENST00000448940 CTRLP40313 264 aa4.03□□□□□ -1.76
CDC42BPA-209ENST00000448940 NUP35Q8NFH5 326 aa4.03□□□□□ -1.76
CDC42BPA-209ENST00000448940 EIF4EBP1Q13541 118 aaPredicted RBP4.03□□□□□ -1.76
CDC42BPA-209ENST00000448940 LINC00528Q8N1L1 170 aa4.03□□□□□ -1.76
CDC42BPA-209ENST00000448940 CD164L2Q6UWJ8 174 aa4.02□□□□□ -1.77
CDC42BPA-209ENST00000448940 FAM167A-AS1Q96KT0 104 aa4.02□□□□□ -1.77
CDC42BPA-209ENST00000448940 WDFY4Q6ZS81 3184 aa4.02□□□□□ -1.77
CDC42BPA-209ENST00000448940 TRBV24-1A0A075B6N3 115 aa4.02□□□□□ -1.77
CDC42BPA-209ENST00000448940 C2orf48Q96LS8 159 aa4.02□□□□□ -1.77
CDC42BPA-209ENST00000448940 C19orf73Q9NVV2 129 aa4.02□□□□□ -1.77
CDC42BPA-209ENST00000448940 FAM236AA0A1B0GUQ0 79 aa4.02□□□□□ -1.77
CDC42BPA-209ENST00000448940 FAM236BA0A1B0GV22 79 aa4.02□□□□□ -1.77
CDC42BPA-209ENST00000448940 LINC01554Q52M75 96 aa4.02□□□□□ -1.77
CDC42BPA-209ENST00000448940 ZNF575Q86XF7 245 aa4.02□□□□□ -1.77
CDC42BPA-209ENST00000448940 ZFAND2AQ8N6M9 145 aa4.02□□□□□ -1.77
CDC42BPA-209ENST00000448940 UTP20O75691 2785 aaKnown RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms