RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 A4D1N5 150 aa10.17□□□□□ -0.78
SMARCA4-204ENST00000444061 UNC79Q9P2D8 2635 aa10.17□□□□□ -0.78
SMARCA4-204ENST00000444061 BAALC-AS2P0C853 105 aa10.17□□□□□ -0.78
SMARCA4-204ENST00000444061 TRBV27A0A0K0K1C4 114 aa10.17□□□□□ -0.78
SMARCA4-204ENST00000444061 RBMY1FQ15415 496 aaKnown RBP10.16□□□□□ -0.78
SMARCA4-204ENST00000444061 C11orf86A6NJI1 115 aa10.16□□□□□ -0.78
SMARCA4-204ENST00000444061 MIAQ16674 131 aa10.16□□□□□ -0.78
SMARCA4-204ENST00000444061 KLK9Q2XQG4 91 aa10.15□□□□□ -0.78
SMARCA4-204ENST00000444061 MUSTN1Q8IVN3 82 aa10.15□□□□□ -0.78
SMARCA4-204ENST00000444061 CNFNQ9BYD5 112 aa10.15□□□□□ -0.78
SMARCA4-204ENST00000444061 SPANXB1Q9NS25 103 aaPredicted RBP10.15□□□□□ -0.79
SMARCA4-204ENST00000444061 BPTFQ12830 3046 aa10.15□□□□□ -0.79
SMARCA4-204ENST00000444061 AGRNO00468 2067 aa10.14□□□□□ -0.79
SMARCA4-204ENST00000444061 H0YGX0 51 aa10.14□□□□□ -0.79
SMARCA4-204ENST00000444061 UBE2D3P61077 147 aa10.14□□□□□ -0.79
SMARCA4-204ENST00000444061 UBE2D2P62837 147 aa10.14□□□□□ -0.79
SMARCA4-204ENST00000444061 TMEM258P61165 79 aa10.14□□□□□ -0.79
SMARCA4-204ENST00000444061 COX8CQ7Z4L0 72 aa10.13□□□□□ -0.79
SMARCA4-204ENST00000444061 TTTY13Q9BZ97 58 aa10.13□□□□□ -0.79
SMARCA4-204ENST00000444061 SPATA3Q8NHX4 192 aa10.13□□□□□ -0.79
SMARCA4-204ENST00000444061 IGKV2-24A0A0C4DH68 120 aa10.13□□□□□ -0.79
SMARCA4-204ENST00000444061 IGHV1-58A0A0C4DH39 117 aa10.12□□□□□ -0.79
SMARCA4-204ENST00000444061 FAM236AA0A1B0GUQ0 79 aa10.12□□□□□ -0.79
SMARCA4-204ENST00000444061 FAM236BA0A1B0GV22 79 aa10.12□□□□□ -0.79
SMARCA4-204ENST00000444061 IGLV4-3A0A075B6K6 122 aa10.12□□□□□ -0.79
SMARCA4-204ENST00000444061 FHL2Q14192 279 aa10.12□□□□□ -0.79
SMARCA4-204ENST00000444061 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.11□□□□□ -0.79
SMARCA4-204ENST00000444061 ORMDL1Q9P0S3 153 aa10.11□□□□□ -0.79
SMARCA4-204ENST00000444061 CFAP54Q96N23 3096 aa10.11□□□□□ -0.79
SMARCA4-204ENST00000444061 TINCRA0A1B0GVN0 87 aa10.11□□□□□ -0.79
SMARCA4-204ENST00000444061 POLR2KP53803 58 aaKnown RBP10.11□□□□□ -0.79
SMARCA4-204ENST00000444061 TSHBP01222 138 aa10.11□□□□□ -0.79
SMARCA4-204ENST00000444061 SBSPONQ8IVN8 264 aa10.11□□□□□ -0.79
SMARCA4-204ENST00000444061 NRACQ8N912 160 aa10.11□□□□□ -0.79
SMARCA4-204ENST00000444061 DSCR8Q96T75 97 aa10.11□□□□□ -0.79
SMARCA4-204ENST00000444061 HAMPP81172 84 aa10.1□□□□□ -0.79
SMARCA4-204ENST00000444061 ETDCA0A1B0GVM5 59 aa10.1□□□□□ -0.79
SMARCA4-204ENST00000444061 SND1-IT1Q9HBX3 110 aa10.09□□□□□ -0.79
SMARCA4-204ENST00000444061 LINC00643Q86TS7 51 aa10.09□□□□□ -0.79
SMARCA4-204ENST00000444061 NDUFV3P56181 108 aaKnown RBP10.09□□□□□ -0.79
SMARCA4-204ENST00000444061 CDKN2A-AS1Q9UH64 79 aa10.09□□□□□ -0.79
SMARCA4-204ENST00000444061 PYGO1Q9Y3Y4 419 aa10.08□□□□□ -0.8
SMARCA4-204ENST00000444061 LECT2O14960 151 aa10.08□□□□□ -0.8
SMARCA4-204ENST00000444061 VPS13AQ96RL7 3174 aa10.08□□□□□ -0.8
SMARCA4-204ENST00000444061 H3BQ85 93 aa10.08□□□□□ -0.8
SMARCA4-204ENST00000444061 CHCHD7Q9BUK0 85 aa10.07□□□□□ -0.8
SMARCA4-204ENST00000444061 UFSP1Q6NVU6 142 aa10.07□□□□□ -0.8
SMARCA4-204ENST00000444061 KRTAP10-3P60369 221 aa10.07□□□□□ -0.8
SMARCA4-204ENST00000444061 A0A1B0GX51 115 aa10.06□□□□□ -0.8
SMARCA4-204ENST00000444061 TCL1BO95988 128 aa10.06□□□□□ -0.8
SMARCA4-204ENST00000444061 CD164L2Q6UWJ8 174 aa10.06□□□□□ -0.8
SMARCA4-204ENST00000444061 SETXQ7Z333 2677 aaKnown RBP10.06□□□□□ -0.8
SMARCA4-204ENST00000444061 SYCNQ0VAF6 134 aa10.06□□□□□ -0.8
SMARCA4-204ENST00000444061 RBM3P98179 157 aaKnown RBP10.06□□□□□ -0.8
SMARCA4-204ENST00000444061 MIR7-3HGQ8N6C7 128 aa10.06□□□□□ -0.8
SMARCA4-204ENST00000444061 CELA1Q9UNI1 258 aa10.06□□□□□ -0.8
SMARCA4-204ENST00000444061 GAS8-AS1O95177 125 aa10.05□□□□□ -0.8
SMARCA4-204ENST00000444061 MT-ATP8P03928 68 aa10.05□□□□□ -0.8
SMARCA4-204ENST00000444061 DAND5Q8N907 189 aa10.05□□□□□ -0.8
SMARCA4-204ENST00000444061 PTH2Q96A98 100 aa10.05□□□□□ -0.8
SMARCA4-204ENST00000444061 C2orf91Q6ZV80 131 aa10.04□□□□□ -0.8
SMARCA4-204ENST00000444061 LINC00959A0A1B0GUT2 108 aa10.04□□□□□ -0.8
SMARCA4-204ENST00000444061 JMJD7-PLA2G4BH0Y9G9 81 aa10.04□□□□□ -0.8
SMARCA4-204ENST00000444061 UBE2AP49459 152 aa10.04□□□□□ -0.8
SMARCA4-204ENST00000444061 B9D2Q9BPU9 175 aa10.03□□□□□ -0.8
SMARCA4-204ENST00000444061 UBE2D4Q9Y2X8 147 aa10.03□□□□□ -0.8
SMARCA4-204ENST00000444061 C11orf72Q8NBR9 251 aa10.03□□□□□ -0.8
SMARCA4-204ENST00000444061 UQCRQO14949 82 aa10.03□□□□□ -0.8
SMARCA4-204ENST00000444061 CDK2AP2O75956 126 aa10.03□□□□□ -0.8
SMARCA4-204ENST00000444061 NDUFC2O95298 119 aa10.02□□□□□ -0.81
SMARCA4-204ENST00000444061 ZNF22P17026 224 aaPredicted RBP10.02□□□□□ -0.81
SMARCA4-204ENST00000444061 MRPS36P82909 103 aaKnown RBP10.02□□□□□ -0.81
SMARCA4-204ENST00000444061 MDFIQ99750 246 aa10.02□□□□□ -0.81
SMARCA4-204ENST00000444061 X6R8D5 127 aa10.02□□□□□ -0.81
SMARCA4-204ENST00000444061 hADV29S1A0JD25 119 aa10.02□□□□□ -0.81
SMARCA4-204ENST00000444061 NCR3O14931 201 aa10□□□□□ -0.81
SMARCA4-204ENST00000444061 LINC00310P59036 64 aa10□□□□□ -0.81
SMARCA4-204ENST00000444061 FAM19A4Q96LR4 140 aa10□□□□□ -0.81
SMARCA4-204ENST00000444061 CDC42SE2Q9NRR3 84 aa10□□□□□ -0.81
SMARCA4-204ENST00000444061 LYPD5Q6UWN5 251 aa10□□□□□ -0.81
SMARCA4-204ENST00000444061 TP73-AS1Q9UF72 201 aa9.99□□□□□ -0.81
SMARCA4-204ENST00000444061 Q6ZSN1 163 aa9.99□□□□□ -0.81
SMARCA4-204ENST00000444061 IMUPQ9GZP8 106 aa9.99□□□□□ -0.81
SMARCA4-204ENST00000444061 K7EIL1 84 aa9.98□□□□□ -0.81
SMARCA4-204ENST00000444061 VCANP13611 3396 aa9.98□□□□□ -0.81
SMARCA4-204ENST00000444061 LINC00526Q96FQ7 95 aa9.98□□□□□ -0.81
SMARCA4-204ENST00000444061 LAMA1P25391 3075 aa9.97□□□□□ -0.81
SMARCA4-204ENST00000444061 CLEC2BQ92478 149 aa9.97□□□□□ -0.81
SMARCA4-204ENST00000444061 STAB1Q9NY15 2570 aa9.97□□□□□ -0.81
SMARCA4-204ENST00000444061 IGKV2D-26A0A0A0MRZ7 120 aa9.97□□□□□ -0.81
SMARCA4-204ENST00000444061 WFDC10BQ8IUB3 73 aa9.97□□□□□ -0.81
SMARCA4-204ENST00000444061 DEFB105AQ8NG35 78 aa9.97□□□□□ -0.81
SMARCA4-204ENST00000444061 TRBV30A0A0K0K1B3 111 aa9.97□□□□□ -0.81
SMARCA4-204ENST00000444061 KRTAP10-11P60412 298 aa9.97□□□□□ -0.81
SMARCA4-204ENST00000444061 IGKV3D-7A0A0C4DH55 119 aa9.96□□□□□ -0.81
SMARCA4-204ENST00000444061 IGLV4-69A0A075B6H9 119 aa9.96□□□□□ -0.81
SMARCA4-204ENST00000444061 C1orf134Q5TEV5 83 aa9.96□□□□□ -0.81
SMARCA4-204ENST00000444061 FLNCQ14315 2725 aa9.96□□□□□ -0.82
SMARCA4-204ENST00000444061 A0A0J9YXY3 114 aa9.96□□□□□ -0.82
SMARCA4-204ENST00000444061 TMEM223A0PJW6 202 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms