RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 CDC42SE2Q9NRR3 84 aa7.51□□□□□ -1.21
LIN54-202ENST00000442461 IGKV2D-24A0A075B6R9 120 aa7.5□□□□□ -1.21
LIN54-202ENST00000442461 Q8N2B8 174 aa7.5□□□□□ -1.21
LIN54-202ENST00000442461 IGHV4-59P01825 116 aa7.49□□□□□ -1.21
LIN54-202ENST00000442461 IGFL2Q6UWQ7 119 aa7.49□□□□□ -1.21
LIN54-202ENST00000442461 LINC00337Q8N6G1 96 aa7.49□□□□□ -1.21
LIN54-202ENST00000442461 LINC00208Q96KT6 92 aa7.49□□□□□ -1.21
LIN54-202ENST00000442461 LIMD2Q9BT23 127 aa7.49□□□□□ -1.21
LIN54-202ENST00000442461 TRBV6-8A0A0A6YYG3 113 aa7.49□□□□□ -1.21
LIN54-202ENST00000442461 WISP2O76076 250 aa7.49□□□□□ -1.21
LIN54-202ENST00000442461 CHCHD10Q8WYQ3 142 aaPredicted RBP7.49□□□□□ -1.21
LIN54-202ENST00000442461 XAGE1AQ9HD64 81 aa7.49□□□□□ -1.21
LIN54-202ENST00000442461 ACACBO00763 2458 aa7.49□□□□□ -1.21
LIN54-202ENST00000442461 CASC2Q6XLA1 102 aa7.49□□□□□ -1.21
LIN54-202ENST00000442461 MYO18BQ8IUG5 2567 aa7.49□□□□□ -1.21
LIN54-202ENST00000442461 DEFB112Q30KQ8 113 aa7.49□□□□□ -1.21
LIN54-202ENST00000442461 KLK12Q9UKR0 248 aa7.49□□□□□ -1.21
LIN54-202ENST00000442461 TMEM89A2RUT3 159 aa7.48□□□□□ -1.21
LIN54-202ENST00000442461 ZFP36P26651 326 aaKnown RBP7.48□□□□□ -1.21
LIN54-202ENST00000442461 COX6A2Q02221 97 aa7.48□□□□□ -1.21
LIN54-202ENST00000442461 ZNF843Q8N446 348 aa7.48□□□□□ -1.21
LIN54-202ENST00000442461 PRO0255Q9UI72 69 aa7.48□□□□□ -1.21
LIN54-202ENST00000442461 PSCAO43653 123 aa7.48□□□□□ -1.21
LIN54-202ENST00000442461 LINC01561Q8N1V8 128 aa7.48□□□□□ -1.21
LIN54-202ENST00000442461 CHCHD7Q9BUK0 85 aa7.48□□□□□ -1.21
LIN54-202ENST00000442461 TET2Q6N021 2002 aaPredicted RBP7.48□□□□□ -1.21
LIN54-202ENST00000442461 PCNTO95613 3336 aa7.47□□□□□ -1.21
LIN54-202ENST00000442461 VPREB1P12018 145 aa7.47□□□□□ -1.21
LIN54-202ENST00000442461 REG3AQ06141 175 aa7.47□□□□□ -1.21
LIN54-202ENST00000442461 COX17Q14061 63 aa7.47□□□□□ -1.21
LIN54-202ENST00000442461 Q8N9L7 120 aa7.47□□□□□ -1.21
LIN54-202ENST00000442461 PTPRBP23467 1997 aa7.47□□□□□ -1.21
LIN54-202ENST00000442461 K7ENP7 123 aa7.47□□□□□ -1.21
LIN54-202ENST00000442461 MAP6D1Q9H9H5 199 aa7.47□□□□□ -1.21
LIN54-202ENST00000442461 Q8IZM0 81 aa7.46□□□□□ -1.21
LIN54-202ENST00000442461 FAM218AQ96MZ4 157 aa7.46□□□□□ -1.21
LIN54-202ENST00000442461 FAM208BQ5VWN6 2430 aa7.46□□□□□ -1.22
LIN54-202ENST00000442461 COL5A1P20908 1838 aaPredicted RBP7.46□□□□□ -1.22
LIN54-202ENST00000442461 IGHV4-38-2P0DP08 117 aa7.46□□□□□ -1.22
LIN54-202ENST00000442461 IGHV4-30-2A0A087WSY4 118 aa7.46□□□□□ -1.22
LIN54-202ENST00000442461 CCL24O00175 119 aa7.46□□□□□ -1.22
LIN54-202ENST00000442461 ZNF73O43830 326 aaPredicted RBP7.46□□□□□ -1.22
LIN54-202ENST00000442461 MUC7Q8TAX7 377 aa7.46□□□□□ -1.22
LIN54-202ENST00000442461 KIF25-AS1Q9Y6Z4 181 aa7.46□□□□□ -1.22
LIN54-202ENST00000442461 LINC00474Q9P2X8 69 aa7.45□□□□□ -1.22
LIN54-202ENST00000442461 LINC00959A0A1B0GUT2 108 aa7.45□□□□□ -1.22
LIN54-202ENST00000442461 ADAMTS20P59510 1910 aa7.45□□□□□ -1.22
LIN54-202ENST00000442461 F8W735 103 aaPredicted RBP7.45□□□□□ -1.22
LIN54-202ENST00000442461 IL17DQ8TAD2 202 aa7.45□□□□□ -1.22
LIN54-202ENST00000442461 A0A0J9YWU9 116 aa7.44□□□□□ -1.22
LIN54-202ENST00000442461 APOC4P55056 127 aa7.44□□□□□ -1.22
LIN54-202ENST00000442461 SERTAD4-AS1Q5TG53 156 aa7.44□□□□□ -1.22
LIN54-202ENST00000442461 HIGD2AQ9BW72 106 aa7.44□□□□□ -1.22
LIN54-202ENST00000442461 CD164L2Q6UWJ8 174 aa7.44□□□□□ -1.22
LIN54-202ENST00000442461 ESM1Q9NQ30 184 aa7.44□□□□□ -1.22
LIN54-202ENST00000442461 CPAMD8Q8IZJ3 1885 aa7.44□□□□□ -1.22
LIN54-202ENST00000442461 BEAN1Q3B7T3 259 aa7.44□□□□□ -1.22
LIN54-202ENST00000442461 DSCAMO60469 2012 aa7.43□□□□□ -1.22
LIN54-202ENST00000442461 IGLV5-39A0A0G2JS06 123 aa7.43□□□□□ -1.22
LIN54-202ENST00000442461 PRR3P79522 188 aaKnown RBP7.42□□□□□ -1.22
LIN54-202ENST00000442461 LINC00575Q6W349 94 aa7.42□□□□□ -1.22
LIN54-202ENST00000442461 SONP18583 2426 aaKnown RBP7.42□□□□□ -1.22
LIN54-202ENST00000442461 GRNP28799 593 aaKnown RBP7.42□□□□□ -1.22
LIN54-202ENST00000442461 KLKP1Q107X0 134 aa7.42□□□□□ -1.22
LIN54-202ENST00000442461 A6NDX4 124 aa7.42□□□□□ -1.22
LIN54-202ENST00000442461 B9D2Q9BPU9 175 aa7.42□□□□□ -1.22
LIN54-202ENST00000442461 M0R378 163 aa7.41□□□□□ -1.22
LIN54-202ENST00000442461 TRAV10A0A0B4J240 114 aa7.41□□□□□ -1.22
LIN54-202ENST00000442461 hDV103S1A0JD37 113 aa7.41□□□□□ -1.22
LIN54-202ENST00000442461 TM2D3Q9BRN9 247 aa7.41□□□□□ -1.22
LIN54-202ENST00000442461 CEP192Q8TEP8 1941 aa7.41□□□□□ -1.22
LIN54-202ENST00000442461 LINC00315P59091 139 aa7.41□□□□□ -1.22
LIN54-202ENST00000442461 WDR87Q6ZQQ6 2873 aa7.4□□□□□ -1.22
LIN54-202ENST00000442461 IGHV4-61A0A0C4DH41 118 aa7.4□□□□□ -1.22
LIN54-202ENST00000442461 MRGPRG-AS1Q2M3A8 158 aa7.4□□□□□ -1.22
LIN54-202ENST00000442461 H7BZZ5 65 aa7.4□□□□□ -1.23
LIN54-202ENST00000442461 SPART-AS1P0CW21 52 aa7.39□□□□□ -1.23
LIN54-202ENST00000442461 DHRS4-AS1Q9P1J3 65 aa7.39□□□□□ -1.23
LIN54-202ENST00000442461 C2orf48Q96LS8 159 aa7.39□□□□□ -1.23
LIN54-202ENST00000442461 PRM2P04554 102 aa7.38□□□□□ -1.23
LIN54-202ENST00000442461 LITAFQ99732 161 aa7.38□□□□□ -1.23
LIN54-202ENST00000442461 K7ERS5 55 aa7.38□□□□□ -1.23
LIN54-202ENST00000442461 MAPK1IP1LQ8NDC0 245 aa7.38□□□□□ -1.23
LIN54-202ENST00000442461 CENPFP49454 3210 aa7.38□□□□□ -1.23
LIN54-202ENST00000442461 RNF223E7ERA6 249 aa7.38□□□□□ -1.23
LIN54-202ENST00000442461 DNAJC9-AS1A6NH13 148 aa7.37□□□□□ -1.23
LIN54-202ENST00000442461 LINC00482Q8N8I6 264 aa7.37□□□□□ -1.23
LIN54-202ENST00000442461 BDP1A6H8Y1 2624 aa7.36□□□□□ -1.23
LIN54-202ENST00000442461 HCG22E2RYF7 251 aa7.36□□□□□ -1.23
LIN54-202ENST00000442461 C1orf137Q5JT78 98 aa7.36□□□□□ -1.23
LIN54-202ENST00000442461 UBE2DNLQ8IWF7 75 aa7.36□□□□□ -1.23
LIN54-202ENST00000442461 SPATA3Q8NHX4 192 aa7.36□□□□□ -1.23
LIN54-202ENST00000442461 CEP350Q5VT06 3117 aa7.36□□□□□ -1.23
LIN54-202ENST00000442461 TNFRSF13BO14836 293 aaPredicted RBP7.36□□□□□ -1.23
LIN54-202ENST00000442461 IGLV5-45A0A087WSX0 123 aa7.35□□□□□ -1.23
LIN54-202ENST00000442461 ERC2-IT1O76042 136 aa7.35□□□□□ -1.23
LIN54-202ENST00000442461 LOC100131303A0A0U1RQF7 123 aa7.35□□□□□ -1.23
LIN54-202ENST00000442461 IGKV2-28A0A075B6P5 120 aa7.35□□□□□ -1.23
LIN54-202ENST00000442461 IGKV2D-28P01615 120 aa7.35□□□□□ -1.23
LIN54-202ENST00000442461 LMO4P61968 165 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms