RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 TGIF2-C20orf24A0A0A6YYL0 155 aa7.31□□□□□ -1.24
TTC28-203ENST00000442232 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.31□□□□□ -1.24
TTC28-203ENST00000442232 NDUFA1O15239 70 aa7.31□□□□□ -1.24
TTC28-203ENST00000442232 RAB5AP20339 215 aa7.31□□□□□ -1.24
TTC28-203ENST00000442232 RNF151Q2KHN1 245 aa7.31□□□□□ -1.24
TTC28-203ENST00000442232 IMMP2LQ96T52 175 aa7.31□□□□□ -1.24
TTC28-203ENST00000442232 UBR4Q5T4S7 5183 aa7.31□□□□□ -1.24
TTC28-203ENST00000442232 IFI27P40305 119 aaPredicted RBP7.3□□□□□ -1.24
TTC28-203ENST00000442232 MRPS36P82909 103 aaKnown RBP7.3□□□□□ -1.24
TTC28-203ENST00000442232 C9orf116Q5BN46 136 aaPredicted RBP7.3□□□□□ -1.24
TTC28-203ENST00000442232 ORMDL3Q8N138 153 aa7.3□□□□□ -1.24
TTC28-203ENST00000442232 OPRPNQ99935 248 aaPredicted RBP7.3□□□□□ -1.24
TTC28-203ENST00000442232 TNXBP22105 4242 aa7.29□□□□□ -1.24
TTC28-203ENST00000442232 A0A1W2PNN7 141 aa7.29□□□□□ -1.24
TTC28-203ENST00000442232 C9JQL5 133 aa7.29□□□□□ -1.24
TTC28-203ENST00000442232 NPYP01303 97 aa7.29□□□□□ -1.24
TTC28-203ENST00000442232 SRSF3P84103 164 aaKnown RBP7.29□□□□□ -1.24
TTC28-203ENST00000442232 ATP5L2Q7Z4Y8 100 aa7.29□□□□□ -1.24
TTC28-203ENST00000442232 MRPL35Q9NZE8 188 aaKnown RBP7.29□□□□□ -1.24
TTC28-203ENST00000442232 A0A1B0GXF2 115 aa7.28□□□□□ -1.24
TTC28-203ENST00000442232 C1orf137Q5JT78 98 aa7.28□□□□□ -1.24
TTC28-203ENST00000442232 TMEM136Q6ZRR5 245 aa7.28□□□□□ -1.24
TTC28-203ENST00000442232 PRELID3AQ96N28 172 aa7.28□□□□□ -1.24
TTC28-203ENST00000442232 SRSF9Q13242 221 aaKnown RBP eCLIP7.27□□□□□ -1.25
TTC28-203ENST00000442232 PHF5AQ7RTV0 110 aaKnown RBP7.27□□□□□ -1.25
TTC28-203ENST00000442232 PSORS1C2Q9UIG4 136 aa7.27□□□□□ -1.25
TTC28-203ENST00000442232 IGHV3OR16-9A0A0B4J2B5 98 aa7.26□□□□□ -1.25
TTC28-203ENST00000442232 A0A1B0GVG6 124 aa7.26□□□□□ -1.25
TTC28-203ENST00000442232 TMEM141Q96I45 108 aa7.26□□□□□ -1.25
TTC28-203ENST00000442232 C2orf88Q9BSF0 95 aa7.26□□□□□ -1.25
TTC28-203ENST00000442232 MAP1LC3AQ9H492 121 aa7.26□□□□□ -1.25
TTC28-203ENST00000442232 LAMTOR2Q9Y2Q5 125 aa7.26□□□□□ -1.25
TTC28-203ENST00000442232 KRTAP10-8P60410 259 aa7.25□□□□□ -1.25
TTC28-203ENST00000442232 Q6ZN92 141 aa7.25□□□□□ -1.25
TTC28-203ENST00000442232 TEX43Q6ZNM6 134 aa7.25□□□□□ -1.25
TTC28-203ENST00000442232 FAM19A5Q7Z5A7 132 aaPredicted RBP7.25□□□□□ -1.25
TTC28-203ENST00000442232 PYGO1Q9Y3Y4 419 aa7.25□□□□□ -1.25
TTC28-203ENST00000442232 A0A087WZ39 114 aa7.24□□□□□ -1.25
TTC28-203ENST00000442232 LOC389332A0A1B0GUA5 103 aa7.24□□□□□ -1.25
TTC28-203ENST00000442232 TLX1NBP0CAT3 122 aa7.24□□□□□ -1.25
TTC28-203ENST00000442232 GAGE2EQ4V326 116 aa7.24□□□□□ -1.25
TTC28-203ENST00000442232 UNQ6190/PRO20217Q6UXQ8 127 aa7.24□□□□□ -1.25
TTC28-203ENST00000442232 DIRC1Q969H9 104 aa7.24□□□□□ -1.25
TTC28-203ENST00000442232 PACRGQ96M98 296 aaPredicted RBP7.24□□□□□ -1.25
TTC28-203ENST00000442232 GAGE2DQ9UEU5 116 aa7.24□□□□□ -1.25
TTC28-203ENST00000442232 CYSLTR1Q9Y271 337 aa7.24□□□□□ -1.25
TTC28-203ENST00000442232 IGLV4-3A0A075B6K6 122 aa7.23□□□□□ -1.25
TTC28-203ENST00000442232 TRBV30A0A0K0K1B3 111 aa7.23□□□□□ -1.25
TTC28-203ENST00000442232 MT-ND4LP03901 98 aa7.23□□□□□ -1.25
TTC28-203ENST00000442232 PRSS2P07478 247 aa7.23□□□□□ -1.25
TTC28-203ENST00000442232 UBE2BP63146 152 aa7.23□□□□□ -1.25
TTC28-203ENST00000442232 PNRC1Q12796 327 aaPredicted RBP7.23□□□□□ -1.25
TTC28-203ENST00000442232 FAM104AQ969W3 186 aa7.23□□□□□ -1.25
TTC28-203ENST00000442232 ANAPC16Q96DE5 110 aa7.23□□□□□ -1.25
TTC28-203ENST00000442232 C6orf48Q9UBA6 75 aa7.23□□□□□ -1.25
TTC28-203ENST00000442232 IGLV7-43P04211 117 aa7.22□□□□□ -1.25
TTC28-203ENST00000442232 RAB14P61106 215 aa7.22□□□□□ -1.25
TTC28-203ENST00000442232 ODF1Q14990 250 aa7.22□□□□□ -1.25
TTC28-203ENST00000442232 ORMDL2Q53FV1 153 aa7.22□□□□□ -1.25
TTC28-203ENST00000442232 C10orf25Q5T742 122 aa7.22□□□□□ -1.25
TTC28-203ENST00000442232 FAM168BA1KXE4 195 aa7.21□□□□□ -1.26
TTC28-203ENST00000442232 M0QXV9 152 aa7.21□□□□□ -1.26
TTC28-203ENST00000442232 LINC00242Q5T6M2 205 aa7.21□□□□□ -1.26
TTC28-203ENST00000442232 C2orf66Q6UXQ4 117 aa7.21□□□□□ -1.26
TTC28-203ENST00000442232 LINC01561Q8N1V8 128 aa7.21□□□□□ -1.26
TTC28-203ENST00000442232 Q8N8P6 123 aa7.21□□□□□ -1.26
TTC28-203ENST00000442232 VCX2Q9H322 139 aa7.21□□□□□ -1.26
TTC28-203ENST00000442232 PRSS47A8MTI9 375 aa7.2□□□□□ -1.26
TTC28-203ENST00000442232 NDUFC2-KCTD14E9PQ53 114 aa7.2□□□□□ -1.26
TTC28-203ENST00000442232 K7EMI3 77 aa7.2□□□□□ -1.26
TTC28-203ENST00000442232 UBE2D1P51668 147 aa7.2□□□□□ -1.26
TTC28-203ENST00000442232 CKS1BP61024 79 aa7.2□□□□□ -1.26
TTC28-203ENST00000442232 PAPPA-AS1Q5QFB9 102 aa7.2□□□□□ -1.26
TTC28-203ENST00000442232 TOMM7Q9P0U1 55 aa7.2□□□□□ -1.26
TTC28-203ENST00000442232 H0Y9J4 135 aa7.19□□□□□ -1.26
TTC28-203ENST00000442232 G0S2P27469 103 aa7.19□□□□□ -1.26
TTC28-203ENST00000442232 KIAA0087Q14695 138 aa7.19□□□□□ -1.26
TTC28-203ENST00000442232 NPSP0C0P6 89 aa7.18□□□□□ -1.26
TTC28-203ENST00000442232 SEC11AP67812 179 aa7.18□□□□□ -1.26
TTC28-203ENST00000442232 C6orf226Q5I0X4 101 aa7.18□□□□□ -1.26
TTC28-203ENST00000442232 C2orf82Q6UX34 121 aa7.18□□□□□ -1.26
TTC28-203ENST00000442232 CTDSP1Q9GZU7 261 aa7.18□□□□□ -1.26
TTC28-203ENST00000442232 NXT2Q9NPJ8 142 aaKnown RBP7.18□□□□□ -1.26
TTC28-203ENST00000442232 LRP2P98164 4655 aa7.18□□□□□ -1.26
TTC28-203ENST00000442232 AMELXQ99217 191 aa7.17□□□□□ -1.26
TTC28-203ENST00000442232 GEMIN7Q9H840 131 aaKnown RBP7.17□□□□□ -1.26
TTC28-203ENST00000442232 HERVK_113P63121 156 aa7.16□□□□□ -1.26
TTC28-203ENST00000442232 ZC2HC1BQ5TFG8 222 aa7.16□□□□□ -1.26
TTC28-203ENST00000442232 Q8IZM0 81 aa7.16□□□□□ -1.26
TTC28-203ENST00000442232 PRR26Q8N8Z3 221 aa7.16□□□□□ -1.26
TTC28-203ENST00000442232 ALKBH7Q9BT30 221 aaPredicted RBP7.16□□□□□ -1.26
TTC28-203ENST00000442232 IGLV1-50A0A075B6I6 118 aa7.15□□□□□ -1.26
TTC28-203ENST00000442232 LINC00173Q6ZV60 143 aa7.15□□□□□ -1.26
TTC28-203ENST00000442232 RPL13AP40429 203 aaKnown RBP7.14□□□□□ -1.27
TTC28-203ENST00000442232 CXCL5P42830 114 aa7.14□□□□□ -1.27
TTC28-203ENST00000442232 LBHQ53QV2 105 aaPredicted RBP7.14□□□□□ -1.27
TTC28-203ENST00000442232 C9orf129Q5T035 196 aaKnown RBP7.14□□□□□ -1.27
TTC28-203ENST00000442232 FAM19A3Q7Z5A8 133 aa7.14□□□□□ -1.27
TTC28-203ENST00000442232 KRTAP11-1Q8IUC1 163 aa7.14□□□□□ -1.27
TTC28-203ENST00000442232 TIMM17AQ99595 171 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms