RNA–Protein interactions for RNA: ENST00000440919.1

SATB2-204, Transcript of SATB homeobox 2, humanhuman

TSL 1 (best)

Gene SATB2, Length 2,166 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2-204ENST00000440919 GAGE2EQ4V326 116 aa12.52□□□□□ -0.41
SATB2-204ENST00000440919 COPS9Q8WXC6 57 aa12.52□□□□□ -0.41
SATB2-204ENST00000440919 NOP10Q9NPE3 64 aaKnown RBP12.52□□□□□ -0.41
SATB2-204ENST00000440919 GAGE2DQ9UEU5 116 aa12.52□□□□□ -0.41
SATB2-204ENST00000440919 GIG44P09565 113 aaPredicted RBP12.5□□□□□ -0.41
SATB2-204ENST00000440919 MEIG1Q5JSS6 88 aa12.5□□□□□ -0.41
SATB2-204ENST00000440919 SHISA2Q6UWI4 295 aa12.5□□□□□ -0.41
SATB2-204ENST00000440919 ESM1Q9NQ30 184 aa12.5□□□□□ -0.41
SATB2-204ENST00000440919 NIPBLQ6KC79 2804 aaeCLIP12.5□□□□□ -0.41
SATB2-204ENST00000440919 ITPR2Q14571 2701 aa12.5□□□□□ -0.41
SATB2-204ENST00000440919 COX7A2LO14548 114 aa12.5□□□□□ -0.41
SATB2-204ENST00000440919 C15orf53Q8NAA6 179 aa12.5□□□□□ -0.41
SATB2-204ENST00000440919 SETXQ7Z333 2677 aaKnown RBP12.5□□□□□ -0.41
SATB2-204ENST00000440919 PLAC8L1A1L4L8 177 aa12.49□□□□□ -0.41
SATB2-204ENST00000440919 HERV-K104P63124 156 aa12.49□□□□□ -0.41
SATB2-204ENST00000440919 UNC79Q9P2D8 2635 aa12.49□□□□□ -0.41
SATB2-204ENST00000440919 FAM240AA0A1B0GVK7 77 aa12.49□□□□□ -0.41
SATB2-204ENST00000440919 Q6Q795 121 aa12.49□□□□□ -0.41
SATB2-204ENST00000440919 TMEM243Q9BU79 118 aa12.49□□□□□ -0.41
SATB2-204ENST00000440919 UBE2L6O14933 153 aa12.48□□□□□ -0.41
SATB2-204ENST00000440919 NOTCH3Q9UM47 2321 aa12.48□□□□□ -0.41
SATB2-204ENST00000440919 C2CD3Q4AC94 2353 aa12.47□□□□□ -0.41
SATB2-204ENST00000440919 NHLRC4P0CG21 123 aaPredicted RBP12.47□□□□□ -0.41
SATB2-204ENST00000440919 C16orf74Q96GX8 76 aa12.47□□□□□ -0.41
SATB2-204ENST00000440919 PPDPFQ9H3Y8 114 aa12.47□□□□□ -0.41
SATB2-204ENST00000440919 JMJD1CQ15652 2540 aa12.46□□□□□ -0.41
SATB2-204ENST00000440919 LOC100131303A0A0U1RQF7 123 aa12.46□□□□□ -0.42
SATB2-204ENST00000440919 NDUFV3P56181 108 aaKnown RBP12.46□□□□□ -0.42
SATB2-204ENST00000440919 GCN1Q92616 2671 aaKnown RBP12.46□□□□□ -0.42
SATB2-204ENST00000440919 GAGE7O76087 117 aa12.45□□□□□ -0.42
SATB2-204ENST00000440919 RNASE1P07998 156 aaKnown RBP12.45□□□□□ -0.42
SATB2-204ENST00000440919 GAGE12FP0CL80 117 aa12.45□□□□□ -0.42
SATB2-204ENST00000440919 GAGE12GP0CL81 117 aa12.45□□□□□ -0.42
SATB2-204ENST00000440919 GAGE12IP0CL82 117 aa12.45□□□□□ -0.42
SATB2-204ENST00000440919 MRPL23Q16540 153 aaKnown RBP12.45□□□□□ -0.42
SATB2-204ENST00000440919 WFDC10AQ9H1F0 79 aa12.45□□□□□ -0.42
SATB2-204ENST00000440919 TRGV2A0A075B6R0 118 aa12.45□□□□□ -0.42
SATB2-204ENST00000440919 TRBV6-4A0A1B0GX49 114 aa12.44□□□□□ -0.42
SATB2-204ENST00000440919 TTC32Q5I0X7 151 aa12.44□□□□□ -0.42
SATB2-204ENST00000440919 CMC4P56277 68 aaPredicted RBP12.43□□□□□ -0.42
SATB2-204ENST00000440919 C19orf73Q9NVV2 129 aa12.42□□□□□ -0.42
SATB2-204ENST00000440919 TRACP01848 142 aa12.42□□□□□ -0.42
SATB2-204ENST00000440919 RPL35AP18077 110 aaKnown RBP12.42□□□□□ -0.42
SATB2-204ENST00000440919 CSNK1G2-AS1Q8NCQ2 148 aa12.42□□□□□ -0.42
SATB2-204ENST00000440919 OVOL2Q9BRP0 275 aa12.42□□□□□ -0.42
SATB2-204ENST00000440919 C16orf95Q9H693 158 aa12.42□□□□□ -0.42
SATB2-204ENST00000440919 COX7B2Q8TF08 81 aa12.41□□□□□ -0.42
SATB2-204ENST00000440919 SETD2Q9BYW2 2564 aaPredicted RBP12.41□□□□□ -0.42
SATB2-204ENST00000440919 FAM110AQ9BQ89 295 aa12.4□□□□□ -0.42
SATB2-204ENST00000440919 ACANP16112 2415 aa12.4□□□□□ -0.42
SATB2-204ENST00000440919 LINC01006Q8NI28 216 aa12.4□□□□□ -0.42
SATB2-204ENST00000440919 FAM218AQ96MZ4 157 aa12.4□□□□□ -0.42
SATB2-204ENST00000440919 TRGV4A0A0C4DH28 118 aa12.39□□□□□ -0.43
SATB2-204ENST00000440919 IGLV1-51P01701 117 aa12.39□□□□□ -0.43
SATB2-204ENST00000440919 HILS1P60008 231 aa12.39□□□□□ -0.43
SATB2-204ENST00000440919 GAGE6Q13070 117 aa12.39□□□□□ -0.43
SATB2-204ENST00000440919 SMR3AQ99954 134 aa12.39□□□□□ -0.43
SATB2-204ENST00000440919 ANK3Q12955 4377 aaKnown RBP12.38□□□□□ -0.43
SATB2-204ENST00000440919 FASNP49327 2511 aaKnown RBP12.38□□□□□ -0.43
SATB2-204ENST00000440919 IGLV4-60A0A075B6I1 120 aa12.38□□□□□ -0.43
SATB2-204ENST00000440919 PF4P02776 101 aa12.38□□□□□ -0.43
SATB2-204ENST00000440919 FAM222AQ5U5X8 452 aa12.38□□□□□ -0.43
SATB2-204ENST00000440919 MIR7-3HGQ8N6C7 128 aa12.38□□□□□ -0.43
SATB2-204ENST00000440919 TRBV6-8A0A0A6YYG3 113 aa12.37□□□□□ -0.43
SATB2-204ENST00000440919 TRAV13-2A0A0B4J235 113 aa12.37□□□□□ -0.43
SATB2-204ENST00000440919 IGKV3OR2-268A0A0C4DH90 116 aa12.37□□□□□ -0.43
SATB2-204ENST00000440919 FHL2Q14192 279 aa12.37□□□□□ -0.43
SATB2-204ENST00000440919 LY6G6DO95868 133 aa12.36□□□□□ -0.43
SATB2-204ENST00000440919 RPL28P46779 137 aaKnown RBP12.36□□□□□ -0.43
SATB2-204ENST00000440919 LINC00337Q8N6G1 96 aa12.36□□□□□ -0.43
SATB2-204ENST00000440919 TOMM7Q9P0U1 55 aa12.36□□□□□ -0.43
SATB2-204ENST00000440919 C22orf24Q9Y442 160 aa12.36□□□□□ -0.43
SATB2-204ENST00000440919 IGKV2-28A0A075B6P5 120 aa12.36□□□□□ -0.43
SATB2-204ENST00000440919 IGHV3OR16-9A0A0B4J2B5 98 aa12.36□□□□□ -0.43
SATB2-204ENST00000440919 IGKV2D-28P01615 120 aa12.36□□□□□ -0.43
SATB2-204ENST00000440919 CRPP02741 224 aa12.36□□□□□ -0.43
SATB2-204ENST00000440919 ACYP1P07311 99 aa12.36□□□□□ -0.43
SATB2-204ENST00000440919 BAALC-AS2P0C853 105 aa12.36□□□□□ -0.43
SATB2-204ENST00000440919 TRBV7-7A0A0K0K1E9 115 aa12.35□□□□□ -0.43
SATB2-204ENST00000440919 SND1-IT1Q9HBX3 110 aa12.35□□□□□ -0.43
SATB2-204ENST00000440919 HECTD1Q9ULT8 2610 aa12.34□□□□□ -0.43
SATB2-204ENST00000440919 CHCHD5Q9BSY4 110 aa12.33□□□□□ -0.44
SATB2-204ENST00000440919 A0A087WZ39 114 aa12.32□□□□□ -0.44
SATB2-204ENST00000440919 B5MCH6 92 aa12.32□□□□□ -0.44
SATB2-204ENST00000440919 CCDC179H3BU77 68 aa12.32□□□□□ -0.44
SATB2-204ENST00000440919 LINC00158P58513 81 aa12.32□□□□□ -0.44
SATB2-204ENST00000440919 IBA57-AS1B1ANH7 110 aa12.3□□□□□ -0.44
SATB2-204ENST00000440919 CCL18P55774 89 aa12.3□□□□□ -0.44
SATB2-204ENST00000440919 SMCR5Q8TEV8 140 aa12.3□□□□□ -0.44
SATB2-204ENST00000440919 Q9HAA7 133 aa12.3□□□□□ -0.44
SATB2-204ENST00000440919 HIVEP2P31629 2446 aa12.3□□□□□ -0.44
SATB2-204ENST00000440919 SMIM11BQ8TCY0 68 aa12.29□□□□□ -0.44
SATB2-204ENST00000440919 SDIM1Q6ZPB5 146 aa12.29□□□□□ -0.44
SATB2-204ENST00000440919 C5orf38Q86SI9 138 aa12.29□□□□□ -0.44
SATB2-204ENST00000440919 SS18L2Q9UHA2 77 aa12.29□□□□□ -0.44
SATB2-204ENST00000440919 MTORP42345 2549 aa12.28□□□□□ -0.44
SATB2-204ENST00000440919 LINC00959A0A1B0GUT2 108 aa12.28□□□□□ -0.44
SATB2-204ENST00000440919 MALP21145 153 aa12.28□□□□□ -0.44
SATB2-204ENST00000440919 IMUPQ9GZP8 106 aa12.27□□□□□ -0.45
SATB2-204ENST00000440919 A0A087WYN8 130 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms