RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 RPS10P5Q9NQ39 176 aa8.71□□□□□ -1.02
LTBR-202ENST00000440421 CYSLTR1Q9Y271 337 aa8.71□□□□□ -1.02
LTBR-202ENST00000440421 PYGO1Q9Y3Y4 419 aa8.71□□□□□ -1.02
LTBR-202ENST00000440421 SPAG11BQ08648 103 aa8.7□□□□□ -1.02
LTBR-202ENST00000440421 ORMDL2Q53FV1 153 aa8.7□□□□□ -1.02
LTBR-202ENST00000440421 C10orf91Q5T1B1 145 aa8.7□□□□□ -1.02
LTBR-202ENST00000440421 Q6ZRU5 148 aa8.7□□□□□ -1.02
LTBR-202ENST00000440421 TMEM141Q96I45 108 aa8.7□□□□□ -1.02
LTBR-202ENST00000440421 CAMK2N2Q96S95 79 aa8.7□□□□□ -1.02
LTBR-202ENST00000440421 NXT2Q9NPJ8 142 aaKnown RBP8.7□□□□□ -1.02
LTBR-202ENST00000440421 PLAC8Q9NZF1 115 aa8.7□□□□□ -1.02
LTBR-202ENST00000440421 CARHSP1Q9Y2V2 147 aaKnown RBP8.7□□□□□ -1.02
LTBR-202ENST00000440421 IGHV3OR16-9A0A0B4J2B5 98 aa8.69□□□□□ -1.02
LTBR-202ENST00000440421 ZC2HC1BQ5TFG8 222 aa8.69□□□□□ -1.02
LTBR-202ENST00000440421 STPG4Q8N801 248 aa8.69□□□□□ -1.02
LTBR-202ENST00000440421 ORAOV1Q8WV07 137 aa8.69□□□□□ -1.02
LTBR-202ENST00000440421 TGIF2-C20orf24A0A0A6YYL0 155 aa8.68□□□□□ -1.02
LTBR-202ENST00000440421 K7EMI3 77 aa8.68□□□□□ -1.02
LTBR-202ENST00000440421 RHEBQ15382 184 aa8.68□□□□□ -1.02
LTBR-202ENST00000440421 TEX43Q6ZNM6 134 aa8.68□□□□□ -1.02
LTBR-202ENST00000440421 GNB1LQ9BYB4 327 aa8.68□□□□□ -1.02
LTBR-202ENST00000440421 PKIGQ9Y2B9 76 aa8.68□□□□□ -1.02
LTBR-202ENST00000440421 J3QL48 77 aa8.67□□□□□ -1.02
LTBR-202ENST00000440421 HNRNPA3P51991 378 aaKnown RBP8.67□□□□□ -1.02
LTBR-202ENST00000440421 LINC00242Q5T6M2 205 aa8.67□□□□□ -1.02
LTBR-202ENST00000440421 Q6ZN92 141 aa8.67□□□□□ -1.02
LTBR-202ENST00000440421 OR10D4PQ8NGN7 298 aa8.67□□□□□ -1.02
LTBR-202ENST00000440421 C2orf48Q96LS8 159 aa8.67□□□□□ -1.02
LTBR-202ENST00000440421 C2orf88Q9BSF0 95 aa8.67□□□□□ -1.02
LTBR-202ENST00000440421 A0A0J9YXV3 536 aa8.66□□□□□ -1.02
LTBR-202ENST00000440421 LOC107984640A0A0U1RRK4 108 aa8.66□□□□□ -1.02
LTBR-202ENST00000440421 GAGE2BQ13066 116 aa8.66□□□□□ -1.02
LTBR-202ENST00000440421 LINC00173Q6ZV60 143 aa8.66□□□□□ -1.02
LTBR-202ENST00000440421 VCX2Q9H322 139 aa8.66□□□□□ -1.02
LTBR-202ENST00000440421 LINC00474Q9P2X8 69 aa8.66□□□□□ -1.02
LTBR-202ENST00000440421 MYCBP2O75592 4640 aa8.65□□□□□ -1.02
LTBR-202ENST00000440421 IGIPA6NJ69 53 aa8.65□□□□□ -1.02
LTBR-202ENST00000440421 APOC3P02656 99 aa8.65□□□□□ -1.02
LTBR-202ENST00000440421 UBE2D1P51668 147 aa8.65□□□□□ -1.02
LTBR-202ENST00000440421 PTTG1IPP53801 180 aa8.65□□□□□ -1.02
LTBR-202ENST00000440421 FABP9Q0Z7S8 132 aa8.65□□□□□ -1.02
LTBR-202ENST00000440421 COX19Q49B96 90 aa8.65□□□□□ -1.02
LTBR-202ENST00000440421 C7orf33Q8WU49 177 aa8.65□□□□□ -1.02
LTBR-202ENST00000440421 ALKBH7Q9BT30 221 aaPredicted RBP8.65□□□□□ -1.02
LTBR-202ENST00000440421 MRPL18Q9H0U6 180 aaKnown RBP8.65□□□□□ -1.02
LTBR-202ENST00000440421 DMBT1Q9UGM3 2413 aaPredicted RBP8.65□□□□□ -1.02
LTBR-202ENST00000440421 A0A087WZ39 114 aa8.64□□□□□ -1.03
LTBR-202ENST00000440421 MT-ND6P03923 174 aa8.64□□□□□ -1.03
LTBR-202ENST00000440421 RPL18AQ02543 176 aaKnown RBP8.64□□□□□ -1.03
LTBR-202ENST00000440421 AMELXQ99217 191 aa8.64□□□□□ -1.03
LTBR-202ENST00000440421 KRTAP29-1A8MX34 341 aaPredicted RBP8.63□□□□□ -1.03
LTBR-202ENST00000440421 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.63□□□□□ -1.03
LTBR-202ENST00000440421 G0S2P27469 103 aa8.63□□□□□ -1.03
LTBR-202ENST00000440421 TOMM6Q96B49 74 aa8.63□□□□□ -1.03
LTBR-202ENST00000440421 NDUFA1O15239 70 aa8.62□□□□□ -1.03
LTBR-202ENST00000440421 NPSP0C0P6 89 aa8.62□□□□□ -1.03
LTBR-202ENST00000440421 NDUFA5Q16718 116 aa8.62□□□□□ -1.03
LTBR-202ENST00000440421 C10orf25Q5T742 122 aa8.62□□□□□ -1.03
LTBR-202ENST00000440421 UNQ6190/PRO20217Q6UXQ8 127 aa8.62□□□□□ -1.03
LTBR-202ENST00000440421 SCGB3A1Q96QR1 104 aa8.62□□□□□ -1.03
LTBR-202ENST00000440421 F8WDY8 70 aa8.61□□□□□ -1.03
LTBR-202ENST00000440421 RNF151Q2KHN1 245 aa8.61□□□□□ -1.03
LTBR-202ENST00000440421 PAPPA-AS1Q5QFB9 102 aa8.61□□□□□ -1.03
LTBR-202ENST00000440421 TIMM17AQ99595 171 aa8.61□□□□□ -1.03
LTBR-202ENST00000440421 MRPL35Q9NZE8 188 aaKnown RBP8.61□□□□□ -1.03
LTBR-202ENST00000440421 SNAPINO95295 136 aa8.6□□□□□ -1.03
LTBR-202ENST00000440421 KIAA0087Q14695 138 aa8.6□□□□□ -1.03
LTBR-202ENST00000440421 FA2HQ7L5A8 372 aa8.6□□□□□ -1.03
LTBR-202ENST00000440421 ERASQ7Z444 233 aa8.6□□□□□ -1.03
LTBR-202ENST00000440421 SVBPQ8N300 66 aa8.6□□□□□ -1.03
LTBR-202ENST00000440421 SMCO4Q9NRQ5 59 aa8.6□□□□□ -1.03
LTBR-202ENST00000440421 C6orf48Q9UBA6 75 aa8.6□□□□□ -1.03
LTBR-202ENST00000440421 A0A1W2PNN7 141 aa8.59□□□□□ -1.03
LTBR-202ENST00000440421 LINC01546A6NGU7 62 aa8.59□□□□□ -1.03
LTBR-202ENST00000440421 C2orf82Q6UX34 121 aa8.59□□□□□ -1.03
LTBR-202ENST00000440421 TRAPPC1Q9Y5R8 145 aa8.59□□□□□ -1.03
LTBR-202ENST00000440421 OXTP01178 125 aa8.58□□□□□ -1.04
LTBR-202ENST00000440421 PRR3P79522 188 aaKnown RBP8.58□□□□□ -1.04
LTBR-202ENST00000440421 C9orf116Q5BN46 136 aaPredicted RBP8.58□□□□□ -1.04
LTBR-202ENST00000440421 FAM19A3Q7Z5A8 133 aa8.58□□□□□ -1.04
LTBR-202ENST00000440421 LINC01561Q8N1V8 128 aa8.58□□□□□ -1.04
LTBR-202ENST00000440421 GEMIN7Q9H840 131 aaKnown RBP8.58□□□□□ -1.04
LTBR-202ENST00000440421 TOMM7Q9P0U1 55 aa8.58□□□□□ -1.04
LTBR-202ENST00000440421 HERC1Q15751 4861 aa8.57□□□□□ -1.04
LTBR-202ENST00000440421 PRSS2P07478 247 aa8.57□□□□□ -1.04
LTBR-202ENST00000440421 HERVK_113P63121 156 aa8.57□□□□□ -1.04
LTBR-202ENST00000440421 SEC11AP67812 179 aa8.57□□□□□ -1.04
LTBR-202ENST00000440421 CDKN2A-AS1Q9UH64 79 aa8.57□□□□□ -1.04
LTBR-202ENST00000440421 PKHD1L1Q86WI1 4243 aa8.56□□□□□ -1.04
LTBR-202ENST00000440421 GAGE2EQ4V326 116 aa8.56□□□□□ -1.04
LTBR-202ENST00000440421 Q6ZRP5 223 aa8.56□□□□□ -1.04
LTBR-202ENST00000440421 PACRGQ96M98 296 aaPredicted RBP8.56□□□□□ -1.04
LTBR-202ENST00000440421 GAGE2DQ9UEU5 116 aa8.56□□□□□ -1.04
LTBR-202ENST00000440421 LINC01549A6NIU2 74 aa8.55□□□□□ -1.04
LTBR-202ENST00000440421 TLX1NBP0CAT3 122 aa8.55□□□□□ -1.04
LTBR-202ENST00000440421 C18orf32Q8TCD1 76 aa8.55□□□□□ -1.04
LTBR-202ENST00000440421 TRBV30A0A0K0K1B3 111 aa8.54□□□□□ -1.04
LTBR-202ENST00000440421 FAM168BA1KXE4 195 aa8.54□□□□□ -1.04
LTBR-202ENST00000440421 CKS1BP61024 79 aa8.54□□□□□ -1.04
LTBR-202ENST00000440421 C6orf226Q5I0X4 101 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms