RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 S100A8P05109 93 aa12.75□□□□□ -0.37
CPNE1-219ENST00000440240 RPL39P62891 51 aaKnown RBP12.75□□□□□ -0.37
CPNE1-219ENST00000440240 IMMP2LQ96T52 175 aa12.75□□□□□ -0.37
CPNE1-219ENST00000440240 SPANXA1Q9NS26 97 aa12.75□□□□□ -0.37
CPNE1-219ENST00000440240 MRPL35Q9NZE8 188 aaKnown RBP12.75□□□□□ -0.37
CPNE1-219ENST00000440240 IGHV3OR16-9A0A0B4J2B5 98 aa12.74□□□□□ -0.37
CPNE1-219ENST00000440240 F8W036 122 aa12.74□□□□□ -0.37
CPNE1-219ENST00000440240 MRPS36P82909 103 aaKnown RBP12.74□□□□□ -0.37
CPNE1-219ENST00000440240 ORAOV1Q8WV07 137 aa12.74□□□□□ -0.37
CPNE1-219ENST00000440240 SMIM2Q9BVW6 85 aa12.74□□□□□ -0.37
CPNE1-219ENST00000440240 PEA15Q15121 130 aa12.73□□□□□ -0.37
CPNE1-219ENST00000440240 C9JQL5 133 aa12.72□□□□□ -0.37
CPNE1-219ENST00000440240 PPBPP02775 128 aa12.72□□□□□ -0.37
CPNE1-219ENST00000440240 C1orf137Q5JT78 98 aa12.72□□□□□ -0.37
CPNE1-219ENST00000440240 PHF5AQ7RTV0 110 aaKnown RBP12.72□□□□□ -0.37
CPNE1-219ENST00000440240 FAM104AQ969W3 186 aa12.72□□□□□ -0.37
CPNE1-219ENST00000440240 SMDT1Q9H4I9 107 aa12.72□□□□□ -0.37
CPNE1-219ENST00000440240 D6R8Y8 96 aa12.71□□□□□ -0.37
CPNE1-219ENST00000440240 NDUFA1O15239 70 aa12.71□□□□□ -0.37
CPNE1-219ENST00000440240 HBBP68871 147 aa12.71□□□□□ -0.37
CPNE1-219ENST00000440240 MRPL54Q6P161 138 aaKnown RBP12.7□□□□□ -0.38
CPNE1-219ENST00000440240 IFITM10A6NMD0 228 aa12.69□□□□□ -0.38
CPNE1-219ENST00000440240 NPYP01303 97 aa12.68□□□□□ -0.38
CPNE1-219ENST00000440240 TLX1NBP0CAT3 122 aa12.68□□□□□ -0.38
CPNE1-219ENST00000440240 RAB5AP20339 215 aa12.68□□□□□ -0.38
CPNE1-219ENST00000440240 A0A1B0GXF2 115 aa12.67□□□□□ -0.38
CPNE1-219ENST00000440240 SRSF3P84103 164 aaKnown RBP12.67□□□□□ -0.38
CPNE1-219ENST00000440240 DIRC1Q969H9 104 aa12.67□□□□□ -0.38
CPNE1-219ENST00000440240 A0A087WZ39 114 aa12.66□□□□□ -0.38
CPNE1-219ENST00000440240 TGIF2-C20orf24A0A0A6YYL0 155 aa12.66□□□□□ -0.38
CPNE1-219ENST00000440240 IGLV7-43P04211 117 aa12.66□□□□□ -0.38
CPNE1-219ENST00000440240 IFI27P40305 119 aaPredicted RBP12.66□□□□□ -0.38
CPNE1-219ENST00000440240 C10orf25Q5T742 122 aa12.66□□□□□ -0.38
CPNE1-219ENST00000440240 UNQ6190/PRO20217Q6UXQ8 127 aa12.66□□□□□ -0.38
CPNE1-219ENST00000440240 ORMDL3Q8N138 153 aa12.65□□□□□ -0.38
CPNE1-219ENST00000440240 C6orf48Q9UBA6 75 aa12.65□□□□□ -0.38
CPNE1-219ENST00000440240 PYGO1Q9Y3Y4 419 aa12.65□□□□□ -0.38
CPNE1-219ENST00000440240 TMEM136Q6ZRR5 245 aa12.64□□□□□ -0.39
CPNE1-219ENST00000440240 FAM168BA1KXE4 195 aa12.63□□□□□ -0.39
CPNE1-219ENST00000440240 ATP5L2Q7Z4Y8 100 aa12.63□□□□□ -0.39
CPNE1-219ENST00000440240 PRELID3AQ96N28 172 aa12.63□□□□□ -0.39
CPNE1-219ENST00000440240 KIAA0087Q14695 138 aa12.62□□□□□ -0.39
CPNE1-219ENST00000440240 GAGE2EQ4V326 116 aa12.62□□□□□ -0.39
CPNE1-219ENST00000440240 GAGE2DQ9UEU5 116 aa12.62□□□□□ -0.39
CPNE1-219ENST00000440240 LINC00242Q5T6M2 205 aa12.61□□□□□ -0.39
CPNE1-219ENST00000440240 TRBV30A0A0K0K1B3 111 aa12.6□□□□□ -0.39
CPNE1-219ENST00000440240 FAM19A5Q7Z5A7 132 aaPredicted RBP12.6□□□□□ -0.39
CPNE1-219ENST00000440240 TMEM141Q96I45 108 aa12.6□□□□□ -0.39
CPNE1-219ENST00000440240 IGLV4-3A0A075B6K6 122 aa12.59□□□□□ -0.39
CPNE1-219ENST00000440240 PRSS47A8MTI9 375 aa12.59□□□□□ -0.39
CPNE1-219ENST00000440240 H0Y9J4 135 aa12.59□□□□□ -0.39
CPNE1-219ENST00000440240 PRR26Q8N8Z3 221 aa12.59□□□□□ -0.39
CPNE1-219ENST00000440240 TEX43Q6ZNM6 134 aa12.58□□□□□ -0.4
CPNE1-219ENST00000440240 KRTAP11-1Q8IUC1 163 aa12.58□□□□□ -0.4
CPNE1-219ENST00000440240 LINC01561Q8N1V8 128 aa12.58□□□□□ -0.4
CPNE1-219ENST00000440240 PACRGQ96M98 296 aaPredicted RBP12.58□□□□□ -0.4
CPNE1-219ENST00000440240 LAMTOR2Q9Y2Q5 125 aa12.58□□□□□ -0.4
CPNE1-219ENST00000440240 NDUFC2-KCTD14E9PQ53 114 aa12.57□□□□□ -0.4
CPNE1-219ENST00000440240 LOC389332A0A1B0GUA5 103 aa12.56□□□□□ -0.4
CPNE1-219ENST00000440240 M0QXV9 152 aa12.56□□□□□ -0.4
CPNE1-219ENST00000440240 UBE2BP63146 152 aa12.56□□□□□ -0.4
CPNE1-219ENST00000440240 C2orf88Q9BSF0 95 aa12.56□□□□□ -0.4
CPNE1-219ENST00000440240 UBE2D1P51668 147 aa12.55□□□□□ -0.4
CPNE1-219ENST00000440240 C2orf82Q6UX34 121 aa12.55□□□□□ -0.4
CPNE1-219ENST00000440240 Q6ZN92 141 aa12.55□□□□□ -0.4
CPNE1-219ENST00000440240 KRTAP7-1Q8IUC3 87 aa12.55□□□□□ -0.4
CPNE1-219ENST00000440240 MAP1LC3AQ9H492 121 aa12.55□□□□□ -0.4
CPNE1-219ENST00000440240 IGLV1-50A0A075B6I6 118 aa12.54□□□□□ -0.4
CPNE1-219ENST00000440240 A0A1B0GVG6 124 aa12.54□□□□□ -0.4
CPNE1-219ENST00000440240 VCX2Q9H322 139 aa12.54□□□□□ -0.4
CPNE1-219ENST00000440240 CYSLTR1Q9Y271 337 aa12.54□□□□□ -0.4
CPNE1-219ENST00000440240 Q8N8P6 123 aa12.53□□□□□ -0.4
CPNE1-219ENST00000440240 PRSS2P07478 247 aa12.52□□□□□ -0.41
CPNE1-219ENST00000440240 NPSP0C0P6 89 aa12.52□□□□□ -0.41
CPNE1-219ENST00000440240 C2orf66Q6UXQ4 117 aa12.52□□□□□ -0.41
CPNE1-219ENST00000440240 K7EMI3 77 aa12.51□□□□□ -0.41
CPNE1-219ENST00000440240 ORMDL2Q53FV1 153 aa12.51□□□□□ -0.41
CPNE1-219ENST00000440240 C9orf129Q5T035 196 aaKnown RBP12.51□□□□□ -0.41
CPNE1-219ENST00000440240 CKS1BP61024 79 aa12.5□□□□□ -0.41
CPNE1-219ENST00000440240 PNRC1Q12796 327 aaPredicted RBP12.5□□□□□ -0.41
CPNE1-219ENST00000440240 C6orf226Q5I0X4 101 aa12.5□□□□□ -0.41
CPNE1-219ENST00000440240 AMELXQ99217 191 aa12.5□□□□□ -0.41
CPNE1-219ENST00000440240 LPAP08519 4548 aa12.5□□□□□ -0.41
CPNE1-219ENST00000440240 MT-ND4LP03901 98 aa12.49□□□□□ -0.41
CPNE1-219ENST00000440240 KRTAP1-4P0C5Y4 121 aa12.49□□□□□ -0.41
CPNE1-219ENST00000440240 ANAPC16Q96DE5 110 aa12.49□□□□□ -0.41
CPNE1-219ENST00000440240 ZC2HC1BQ5TFG8 222 aa12.48□□□□□ -0.41
CPNE1-219ENST00000440240 LINC00173Q6ZV60 143 aa12.48□□□□□ -0.41
CPNE1-219ENST00000440240 TOMM7Q9P0U1 55 aa12.48□□□□□ -0.41
CPNE1-219ENST00000440240 G0S2P27469 103 aa12.47□□□□□ -0.41
CPNE1-219ENST00000440240 RPL13AP40429 203 aaKnown RBP12.47□□□□□ -0.41
CPNE1-219ENST00000440240 PAPPA-AS1Q5QFB9 102 aa12.47□□□□□ -0.41
CPNE1-219ENST00000440240 FAM19A3Q7Z5A8 133 aa12.47□□□□□ -0.41
CPNE1-219ENST00000440240 Q8IZM0 81 aa12.47□□□□□ -0.41
CPNE1-219ENST00000440240 IGIPA6NJ69 53 aa12.46□□□□□ -0.41
CPNE1-219ENST00000440240 SEC11AP67812 179 aa12.46□□□□□ -0.41
CPNE1-219ENST00000440240 ALKBH7Q9BT30 221 aaPredicted RBP12.46□□□□□ -0.41
CPNE1-219ENST00000440240 NXT2Q9NPJ8 142 aaKnown RBP12.46□□□□□ -0.41
CPNE1-219ENST00000440240 HERVK_113P63121 156 aa12.45□□□□□ -0.42
CPNE1-219ENST00000440240 ZNF861PO60384 105 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms