RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 HIGD1BQ9P298 99 aa10.06□□□□□ -0.8
TNFRSF1A-204ENST00000440083 A0A096LPF7 62 aa10.05□□□□□ -0.8
TNFRSF1A-204ENST00000440083 ZNF815PA8K554 130 aa10.05□□□□□ -0.8
TNFRSF1A-204ENST00000440083 H3BRM9 83 aa10.05□□□□□ -0.8
TNFRSF1A-204ENST00000440083 LEPROTO15243 131 aa10.05□□□□□ -0.8
TNFRSF1A-204ENST00000440083 LY6G6CO95867 125 aa10.05□□□□□ -0.8
TNFRSF1A-204ENST00000440083 MRPL23Q16540 153 aaKnown RBP10.05□□□□□ -0.8
TNFRSF1A-204ENST00000440083 MPV17L2Q567V2 206 aa10.05□□□□□ -0.8
TNFRSF1A-204ENST00000440083 LINC00469Q8N7U9 141 aa10.05□□□□□ -0.8
TNFRSF1A-204ENST00000440083 PLEKHB2Q96CS7 222 aa10.05□□□□□ -0.8
TNFRSF1A-204ENST00000440083 CDC42SE2Q9NRR3 84 aa10.05□□□□□ -0.8
TNFRSF1A-204ENST00000440083 DNAH6Q9C0G6 4158 aa10.04□□□□□ -0.8
TNFRSF1A-204ENST00000440083 TIRAPP58753 221 aa10.04□□□□□ -0.8
TNFRSF1A-204ENST00000440083 HERVK_113P63121 156 aa10.04□□□□□ -0.8
TNFRSF1A-204ENST00000440083 MAPKAPK5-AS1Q8N8E1 139 aa10.04□□□□□ -0.8
TNFRSF1A-204ENST00000440083 J3QQQ9 107 aa10.03□□□□□ -0.8
TNFRSF1A-204ENST00000440083 BVES-AS1Q5T3Y7 98 aa10.03□□□□□ -0.8
TNFRSF1A-204ENST00000440083 IGHV3-64A0A075B6Q5 118 aa10.02□□□□□ -0.81
TNFRSF1A-204ENST00000440083 TRAV13-1A0A0B4J241 112 aa10.02□□□□□ -0.81
TNFRSF1A-204ENST00000440083 TMEM262E9PQX1 116 aa10.02□□□□□ -0.81
TNFRSF1A-204ENST00000440083 SCGB1D4Q6XE38 83 aa10.02□□□□□ -0.81
TNFRSF1A-204ENST00000440083 FAM19A3Q7Z5A8 133 aa10.01□□□□□ -0.81
TNFRSF1A-204ENST00000440083 IGLV5-45A0A087WSX0 123 aa10□□□□□ -0.81
TNFRSF1A-204ENST00000440083 TSPEAR-AS2P59090 65 aa10□□□□□ -0.81
TNFRSF1A-204ENST00000440083 IGHV1-58A0A0C4DH39 117 aa9.99□□□□□ -0.81
TNFRSF1A-204ENST00000440083 IGKV3OR2-268A0A0C4DH90 116 aa9.99□□□□□ -0.81
TNFRSF1A-204ENST00000440083 A6NDN8 102 aa9.99□□□□□ -0.81
TNFRSF1A-204ENST00000440083 SPINK8P0C7L1 97 aa9.99□□□□□ -0.81
TNFRSF1A-204ENST00000440083 GCSHP23434 173 aa9.99□□□□□ -0.81
TNFRSF1A-204ENST00000440083 TAL2Q16559 108 aa9.99□□□□□ -0.81
TNFRSF1A-204ENST00000440083 LINC00242Q5T6M2 205 aa9.99□□□□□ -0.81
TNFRSF1A-204ENST00000440083 LCE2DQ5TA82 110 aaPredicted RBP9.99□□□□□ -0.81
TNFRSF1A-204ENST00000440083 ORAOV1Q8WV07 137 aa9.99□□□□□ -0.81
TNFRSF1A-204ENST00000440083 KMT2AQ03164 3969 aa9.98□□□□□ -0.81
TNFRSF1A-204ENST00000440083 DNAH10Q8IVF4 4471 aa9.98□□□□□ -0.81
TNFRSF1A-204ENST00000440083 IGLV4-60A0A075B6I1 120 aa9.98□□□□□ -0.81
TNFRSF1A-204ENST00000440083 A0A1B0GV90 55 aa9.98□□□□□ -0.81
TNFRSF1A-204ENST00000440083 H3BNG1 76 aa9.98□□□□□ -0.81
TNFRSF1A-204ENST00000440083 IGHV3-30-3P0DP02 117 aa9.98□□□□□ -0.81
TNFRSF1A-204ENST00000440083 LELP1Q5T871 98 aa9.98□□□□□ -0.81
TNFRSF1A-204ENST00000440083 C15orf53Q8NAA6 179 aa9.98□□□□□ -0.81
TNFRSF1A-204ENST00000440083 HIST1H4GQ99525 98 aa9.98□□□□□ -0.81
TNFRSF1A-204ENST00000440083 A0A1B0GUV1 79 aa9.97□□□□□ -0.81
TNFRSF1A-204ENST00000440083 RBX1P62877 108 aa9.97□□□□□ -0.81
TNFRSF1A-204ENST00000440083 CDKN2A-AS1Q9UH64 79 aa9.97□□□□□ -0.81
TNFRSF1A-204ENST00000440083 TRAV8-3A0A0A6YYJ7 113 aa9.96□□□□□ -0.82
TNFRSF1A-204ENST00000440083 PTTG1IPP53801 180 aa9.96□□□□□ -0.82
TNFRSF1A-204ENST00000440083 COX6A2Q02221 97 aa9.96□□□□□ -0.82
TNFRSF1A-204ENST00000440083 SS18Q15532 418 aa9.95□□□□□ -0.82
TNFRSF1A-204ENST00000440083 UBE2DNLQ8IWF7 75 aa9.95□□□□□ -0.82
TNFRSF1A-204ENST00000440083 CEND1Q8N111 149 aa9.95□□□□□ -0.82
TNFRSF1A-204ENST00000440083 SRSF9Q13242 221 aaKnown RBP eCLIP9.93□□□□□ -0.82
TNFRSF1A-204ENST00000440083 NDUFA12Q9UI09 145 aa9.93□□□□□ -0.82
TNFRSF1A-204ENST00000440083 DNAH2Q9P225 4427 aa9.93□□□□□ -0.82
TNFRSF1A-204ENST00000440083 LINC00959A0A1B0GUT2 108 aa9.92□□□□□ -0.82
TNFRSF1A-204ENST00000440083 TMEM238LA0A1B0GVL6 79 aa9.92□□□□□ -0.82
TNFRSF1A-204ENST00000440083 A6NJY4 79 aa9.92□□□□□ -0.82
TNFRSF1A-204ENST00000440083 SMIM1B2RUZ4 78 aa9.92□□□□□ -0.82
TNFRSF1A-204ENST00000440083 TMEM238C9JI98 176 aa9.92□□□□□ -0.82
TNFRSF1A-204ENST00000440083 CCL25O15444 150 aa9.92□□□□□ -0.82
TNFRSF1A-204ENST00000440083 ANGP03950 147 aaKnown RBP9.92□□□□□ -0.82
TNFRSF1A-204ENST00000440083 SPANXB1Q9NS25 103 aaPredicted RBP9.92□□□□□ -0.82
TNFRSF1A-204ENST00000440083 LINC00588Q9Y4M8 146 aa9.92□□□□□ -0.82
TNFRSF1A-204ENST00000440083 FXYD2P54710 66 aa9.91□□□□□ -0.82
TNFRSF1A-204ENST00000440083 ESRGQ1W209 222 aa9.91□□□□□ -0.82
TNFRSF1A-204ENST00000440083 CLPSL2Q6UWE3 100 aa9.91□□□□□ -0.82
TNFRSF1A-204ENST00000440083 LYPD5Q6UWN5 251 aa9.91□□□□□ -0.82
TNFRSF1A-204ENST00000440083 TM2D2Q9BX73 214 aa9.91□□□□□ -0.82
TNFRSF1A-204ENST00000440083 IGLV5-39A0A0G2JS06 123 aa9.9□□□□□ -0.82
TNFRSF1A-204ENST00000440083 A0A0J9YXY3 114 aa9.9□□□□□ -0.82
TNFRSF1A-204ENST00000440083 NDUFA1O15239 70 aa9.9□□□□□ -0.82
TNFRSF1A-204ENST00000440083 DNAH17Q9UFH2 4485 aa9.9□□□□□ -0.83
TNFRSF1A-204ENST00000440083 CCL18P55774 89 aa9.89□□□□□ -0.83
TNFRSF1A-204ENST00000440083 LINC00269Q8N2A0 174 aa9.89□□□□□ -0.83
TNFRSF1A-204ENST00000440083 C10orf126Q8N4M7 172 aa9.89□□□□□ -0.83
TNFRSF1A-204ENST00000440083 COX11Q9Y6N1 276 aa9.89□□□□□ -0.83
TNFRSF1A-204ENST00000440083 M0R2N4 97 aa9.88□□□□□ -0.83
TNFRSF1A-204ENST00000440083 TAX1BP3O14907 124 aa9.88□□□□□ -0.83
TNFRSF1A-204ENST00000440083 SMIM13P0DJ93 91 aa9.88□□□□□ -0.83
TNFRSF1A-204ENST00000440083 XCL1P47992 114 aa9.88□□□□□ -0.83
TNFRSF1A-204ENST00000440083 REG3AQ06141 175 aa9.88□□□□□ -0.83
TNFRSF1A-204ENST00000440083 NHP2Q9NX24 153 aaKnown RBP9.88□□□□□ -0.83
TNFRSF1A-204ENST00000440083 COX7B2Q8TF08 81 aa9.87□□□□□ -0.83
TNFRSF1A-204ENST00000440083 A0A087WZ39 114 aa9.86□□□□□ -0.83
TNFRSF1A-204ENST00000440083 IGHV3OR16-9A0A0B4J2B5 98 aa9.86□□□□□ -0.83
TNFRSF1A-204ENST00000440083 TIMM17BO60830 172 aa9.86□□□□□ -0.83
TNFRSF1A-204ENST00000440083 CRPP02741 224 aa9.86□□□□□ -0.83
TNFRSF1A-204ENST00000440083 CIRBPQ14011 172 aaKnown RBP9.86□□□□□ -0.83
TNFRSF1A-204ENST00000440083 C5orf38Q86SI9 138 aa9.86□□□□□ -0.83
TNFRSF1A-204ENST00000440083 Q9H8V8 135 aa9.86□□□□□ -0.83
TNFRSF1A-204ENST00000440083 TOMM7Q9P0U1 55 aa9.86□□□□□ -0.83
TNFRSF1A-204ENST00000440083 K7EP13 123 aa9.85□□□□□ -0.83
TNFRSF1A-204ENST00000440083 IGHV3-30P01768 117 aa9.85□□□□□ -0.83
TNFRSF1A-204ENST00000440083 IGHV3-33P01772 117 aa9.85□□□□□ -0.83
TNFRSF1A-204ENST00000440083 IGHV3-30-5P0DP03 117 aa9.85□□□□□ -0.83
TNFRSF1A-204ENST00000440083 HERV-K104P63124 156 aa9.85□□□□□ -0.83
TNFRSF1A-204ENST00000440083 LINC01561Q8N1V8 128 aa9.85□□□□□ -0.83
TNFRSF1A-204ENST00000440083 Q8N3U1 123 aa9.85□□□□□ -0.83
TNFRSF1A-204ENST00000440083 RAB37Q96AX2 223 aa9.85□□□□□ -0.83
TNFRSF1A-204ENST00000440083 MEIG1Q5JSS6 88 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms