RNA–Protein interactions for RNA: ENST00000440053.1

VIL1-204, Transcript of villin 1, humanhuman

TSL 1 (best) BASIC

Gene VIL1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-204ENST00000440053 IFITM10A6NMD0 228 aa12.98□□□□□ -0.33
VIL1-204ENST00000440053 MAP1LC3AQ9H492 121 aa12.98□□□□□ -0.33
VIL1-204ENST00000440053 IGLV4-3A0A075B6K6 122 aa12.97□□□□□ -0.33
VIL1-204ENST00000440053 TMEM218A2RU14 115 aa12.97□□□□□ -0.33
VIL1-204ENST00000440053 SPAG11BQ08648 103 aa12.97□□□□□ -0.33
VIL1-204ENST00000440053 ZC2HC1BQ5TFG8 222 aa12.97□□□□□ -0.33
VIL1-204ENST00000440053 Q8N8P6 123 aa12.97□□□□□ -0.33
VIL1-204ENST00000440053 LINC00474Q9P2X8 69 aa12.97□□□□□ -0.33
VIL1-204ENST00000440053 APOMO95445 188 aa12.96□□□□□ -0.34
VIL1-204ENST00000440053 IFI27P40305 119 aaPredicted RBP12.96□□□□□ -0.34
VIL1-204ENST00000440053 PTTG1IPP53801 180 aa12.96□□□□□ -0.34
VIL1-204ENST00000440053 C2orf48Q96LS8 159 aa12.96□□□□□ -0.34
VIL1-204ENST00000440053 LAMTOR2Q9Y2Q5 125 aa12.96□□□□□ -0.34
VIL1-204ENST00000440053 PYGO1Q9Y3Y4 419 aa12.96□□□□□ -0.34
VIL1-204ENST00000440053 LOC107984640A0A0U1RRK4 108 aa12.95□□□□□ -0.34
VIL1-204ENST00000440053 ORAOV1Q8WV07 137 aa12.95□□□□□ -0.34
VIL1-204ENST00000440053 A0A1W2PNN7 141 aa12.94□□□□□ -0.34
VIL1-204ENST00000440053 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.94□□□□□ -0.34
VIL1-204ENST00000440053 KIAA1644Q3SXP7 199 aa12.94□□□□□ -0.34
VIL1-204ENST00000440053 LINC00242Q5T6M2 205 aa12.93□□□□□ -0.34
VIL1-204ENST00000440053 C10orf25Q5T742 122 aa12.93□□□□□ -0.34
VIL1-204ENST00000440053 UQCC3Q6UW78 93 aa12.93□□□□□ -0.34
VIL1-204ENST00000440053 CTDSP1Q9GZU7 261 aa12.93□□□□□ -0.34
VIL1-204ENST00000440053 PRR3P79522 188 aaKnown RBP12.92□□□□□ -0.34
VIL1-204ENST00000440053 C2orf66Q6UXQ4 117 aa12.92□□□□□ -0.34
VIL1-204ENST00000440053 OR10D4PQ8NGN7 298 aa12.92□□□□□ -0.34
VIL1-204ENST00000440053 TMEM141Q96I45 108 aa12.92□□□□□ -0.34
VIL1-204ENST00000440053 IMMP2LQ96T52 175 aa12.92□□□□□ -0.34
VIL1-204ENST00000440053 PKIGQ9Y2B9 76 aa12.92□□□□□ -0.34
VIL1-204ENST00000440053 MT1HL1P0DM35 61 aa12.91□□□□□ -0.34
VIL1-204ENST00000440053 RPL18AQ02543 176 aaKnown RBP12.91□□□□□ -0.34
VIL1-204ENST00000440053 UNQ6190/PRO20217Q6UXQ8 127 aa12.91□□□□□ -0.34
VIL1-204ENST00000440053 CYSLTR1Q9Y271 337 aa12.9□□□□□ -0.34
VIL1-204ENST00000440053 LINC00173Q6ZV60 143 aa12.89□□□□□ -0.35
VIL1-204ENST00000440053 HMCN2Q8NDA2 5059 aa12.89□□□□□ -0.35
VIL1-204ENST00000440053 A0A087WZ39 114 aa12.88□□□□□ -0.35
VIL1-204ENST00000440053 TGIF2-C20orf24A0A0A6YYL0 155 aa12.88□□□□□ -0.35
VIL1-204ENST00000440053 UBE2D1P51668 147 aa12.88□□□□□ -0.35
VIL1-204ENST00000440053 TEX43Q6ZNM6 134 aa12.88□□□□□ -0.35
VIL1-204ENST00000440053 COMMD7Q86VX2 200 aa12.88□□□□□ -0.35
VIL1-204ENST00000440053 SEC11CQ9BY50 192 aa12.88□□□□□ -0.35
VIL1-204ENST00000440053 IGIPA6NJ69 53 aa12.87□□□□□ -0.35
VIL1-204ENST00000440053 KIAA0087Q14695 138 aa12.87□□□□□ -0.35
VIL1-204ENST00000440053 RNF151Q2KHN1 245 aa12.87□□□□□ -0.35
VIL1-204ENST00000440053 ORMDL2Q53FV1 153 aa12.87□□□□□ -0.35
VIL1-204ENST00000440053 C9orf116Q5BN46 136 aaPredicted RBP12.87□□□□□ -0.35
VIL1-204ENST00000440053 MRPL35Q9NZE8 188 aaKnown RBP12.87□□□□□ -0.35
VIL1-204ENST00000440053 AMELXQ99217 191 aa12.86□□□□□ -0.35
VIL1-204ENST00000440053 VCX2Q9H322 139 aa12.86□□□□□ -0.35
VIL1-204ENST00000440053 NXT2Q9NPJ8 142 aaKnown RBP12.86□□□□□ -0.35
VIL1-204ENST00000440053 C6orf48Q9UBA6 75 aa12.86□□□□□ -0.35
VIL1-204ENST00000440053 NDUFA1O15239 70 aa12.85□□□□□ -0.35
VIL1-204ENST00000440053 SERTAD4-AS1Q5TG53 156 aa12.85□□□□□ -0.35
VIL1-204ENST00000440053 C2orf82Q6UX34 121 aa12.84□□□□□ -0.35
VIL1-204ENST00000440053 Q6ZRP5 223 aa12.84□□□□□ -0.35
VIL1-204ENST00000440053 F8WDY8 70 aa12.83□□□□□ -0.36
VIL1-204ENST00000440053 K7EMI3 77 aa12.83□□□□□ -0.36
VIL1-204ENST00000440053 Q6ZN92 141 aa12.83□□□□□ -0.36
VIL1-204ENST00000440053 PHF5AQ7RTV0 110 aaKnown RBP12.83□□□□□ -0.36
VIL1-204ENST00000440053 C2orf88Q9BSF0 95 aa12.83□□□□□ -0.36
VIL1-204ENST00000440053 TRAV9-1A0A075B6T8 112 aa12.82□□□□□ -0.36
VIL1-204ENST00000440053 FAM168BA1KXE4 195 aa12.82□□□□□ -0.36
VIL1-204ENST00000440053 SRSF9Q13242 221 aaKnown RBP eCLIP12.81□□□□□ -0.36
VIL1-204ENST00000440053 C10orf91Q5T1B1 145 aa12.81□□□□□ -0.36
VIL1-204ENST00000440053 GNB1LQ9BYB4 327 aa12.81□□□□□ -0.36
VIL1-204ENST00000440053 TNXBP22105 4242 aa12.81□□□□□ -0.36
VIL1-204ENST00000440053 S100PP25815 95 aa12.8□□□□□ -0.36
VIL1-204ENST00000440053 GAGE2EQ4V326 116 aa12.8□□□□□ -0.36
VIL1-204ENST00000440053 TOMM6Q96B49 74 aa12.8□□□□□ -0.36
VIL1-204ENST00000440053 ALKBH7Q9BT30 221 aaPredicted RBP12.8□□□□□ -0.36
VIL1-204ENST00000440053 GAGE2DQ9UEU5 116 aa12.8□□□□□ -0.36
VIL1-204ENST00000440053 TLX1NBP0CAT3 122 aa12.78□□□□□ -0.36
VIL1-204ENST00000440053 RPS10P5Q9NQ39 176 aa12.78□□□□□ -0.36
VIL1-204ENST00000440053 PSORS1C2Q9UIG4 136 aa12.78□□□□□ -0.36
VIL1-204ENST00000440053 NPSP0C0P6 89 aa12.78□□□□□ -0.36
VIL1-204ENST00000440053 ODF1Q14990 250 aa12.78□□□□□ -0.36
VIL1-204ENST00000440053 SPINK6Q6UWN8 80 aa12.78□□□□□ -0.36
VIL1-204ENST00000440053 FAM19A3Q7Z5A8 133 aa12.78□□□□□ -0.36
VIL1-204ENST00000440053 TOMM7Q9P0U1 55 aa12.78□□□□□ -0.36
VIL1-204ENST00000440053 KRTAP7-1Q8IUC3 87 aa12.77□□□□□ -0.37
VIL1-204ENST00000440053 LINC01561Q8N1V8 128 aa12.77□□□□□ -0.37
VIL1-204ENST00000440053 LINC01600Q96MT4 127 aa12.77□□□□□ -0.37
VIL1-204ENST00000440053 SCGB3A1Q96QR1 104 aa12.77□□□□□ -0.37
VIL1-204ENST00000440053 TIMM17AQ99595 171 aa12.77□□□□□ -0.37
VIL1-204ENST00000440053 CDKN2A-AS1Q9UH64 79 aa12.77□□□□□ -0.37
VIL1-204ENST00000440053 FABP9Q0Z7S8 132 aa12.76□□□□□ -0.37
VIL1-204ENST00000440053 KRTAP11-1Q8IUC1 163 aa12.76□□□□□ -0.37
VIL1-204ENST00000440053 MRPL18Q9H0U6 180 aaKnown RBP12.76□□□□□ -0.37
VIL1-204ENST00000440053 CARHSP1Q9Y2V2 147 aaKnown RBP12.76□□□□□ -0.37
VIL1-204ENST00000440053 ERASQ7Z444 233 aa12.75□□□□□ -0.37
VIL1-204ENST00000440053 FAM19A5Q7Z5A7 132 aaPredicted RBP12.75□□□□□ -0.37
VIL1-204ENST00000440053 PLA2G2DQ9UNK4 145 aa12.75□□□□□ -0.37
VIL1-204ENST00000440053 MT-ND6P03923 174 aa12.74□□□□□ -0.37
VIL1-204ENST00000440053 G0S2P27469 103 aa12.74□□□□□ -0.37
VIL1-204ENST00000440053 TRBV30A0A0K0K1B3 111 aa12.73□□□□□ -0.37
VIL1-204ENST00000440053 LINC01546A6NGU7 62 aa12.73□□□□□ -0.37
VIL1-204ENST00000440053 C6orf226Q5I0X4 101 aa12.73□□□□□ -0.37
VIL1-204ENST00000440053 PACRGQ96M98 296 aaPredicted RBP12.73□□□□□ -0.37
VIL1-204ENST00000440053 PRSS2P07478 247 aa12.72□□□□□ -0.37
VIL1-204ENST00000440053 RHEBQ15382 184 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms