RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 S100A2P29034 98 aa11.69□□□□□ -0.54
CCDC188-201ENST00000439765 REG3AQ06141 175 aa11.69□□□□□ -0.54
CCDC188-201ENST00000439765 CDPF1Q6NVV7 123 aa11.69□□□□□ -0.54
CCDC188-201ENST00000439765 PGPEP1Q9NXJ5 209 aa11.69□□□□□ -0.54
CCDC188-201ENST00000439765 IGLV10-54A0A075B6I4 117 aa11.68□□□□□ -0.54
CCDC188-201ENST00000439765 PAPPA-AS1Q5QFB9 102 aa11.68□□□□□ -0.54
CCDC188-201ENST00000439765 IFI27L1Q96BM0 104 aa11.68□□□□□ -0.54
CCDC188-201ENST00000439765 RNASE13Q5GAN3 156 aaKnown RBP11.67□□□□□ -0.54
CCDC188-201ENST00000439765 Q6ZN92 141 aa11.67□□□□□ -0.54
CCDC188-201ENST00000439765 HIST1H2BLQ99880 126 aa11.67□□□□□ -0.54
CCDC188-201ENST00000439765 VCX2Q9H322 139 aa11.67□□□□□ -0.54
CCDC188-201ENST00000439765 AMELXQ99217 191 aa11.66□□□□□ -0.54
CCDC188-201ENST00000439765 IGLV5-52A0A0A0MRZ9 124 aa11.65□□□□□ -0.54
CCDC188-201ENST00000439765 IFITM10A6NMD0 228 aa11.65□□□□□ -0.54
CCDC188-201ENST00000439765 ZC2HC1BQ5TFG8 222 aa11.65□□□□□ -0.54
CCDC188-201ENST00000439765 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.64□□□□□ -0.55
CCDC188-201ENST00000439765 IGKV3OR2-268A0A0C4DH90 116 aa11.64□□□□□ -0.55
CCDC188-201ENST00000439765 TEX43Q6ZNM6 134 aa11.64□□□□□ -0.55
CCDC188-201ENST00000439765 PRSS1P07477 247 aa11.63□□□□□ -0.55
CCDC188-201ENST00000439765 PMVKQ15126 192 aa11.63□□□□□ -0.55
CCDC188-201ENST00000439765 MAP1LC3CQ9BXW4 147 aa11.63□□□□□ -0.55
CCDC188-201ENST00000439765 NTN5Q8WTR8 489 aaPredicted RBP11.63□□□□□ -0.55
CCDC188-201ENST00000439765 CST9LQ9H4G1 147 aa11.63□□□□□ -0.55
CCDC188-201ENST00000439765 C2orf88Q9BSF0 95 aa11.62□□□□□ -0.55
CCDC188-201ENST00000439765 KRTAP10-1P60331 282 aa11.61□□□□□ -0.55
CCDC188-201ENST00000439765 KRTAP26-1Q6PEX3 210 aa11.61□□□□□ -0.55
CCDC188-201ENST00000439765 TRAV13-1A0A0B4J241 112 aa11.6□□□□□ -0.55
CCDC188-201ENST00000439765 TRAV12-1A0A0B4J245 112 aa11.6□□□□□ -0.55
CCDC188-201ENST00000439765 TRAV8-4A0A0B4J246 113 aa11.6□□□□□ -0.55
CCDC188-201ENST00000439765 LINC00959A0A1B0GUT2 108 aa11.6□□□□□ -0.55
CCDC188-201ENST00000439765 USP17L23D6RBM5 183 aa11.6□□□□□ -0.55
CCDC188-201ENST00000439765 C3orf79P0CE67 100 aa11.6□□□□□ -0.55
CCDC188-201ENST00000439765 GCSHP23434 173 aa11.6□□□□□ -0.55
CCDC188-201ENST00000439765 SYS1-DBNDD2H3BUS1 97 aa11.59□□□□□ -0.55
CCDC188-201ENST00000439765 UBE2D1P51668 147 aa11.59□□□□□ -0.55
CCDC188-201ENST00000439765 H0Y8G0 127 aa11.58□□□□□ -0.56
CCDC188-201ENST00000439765 CCL25O15444 150 aa11.58□□□□□ -0.56
CCDC188-201ENST00000439765 KRTDAPP60985 99 aa11.58□□□□□ -0.56
CCDC188-201ENST00000439765 SS18Q15532 418 aa11.58□□□□□ -0.56
CCDC188-201ENST00000439765 XGP55808 180 aa11.57□□□□□ -0.56
CCDC188-201ENST00000439765 PET117Q6UWS5 81 aa11.57□□□□□ -0.56
CCDC188-201ENST00000439765 FAM19A3Q7Z5A8 133 aa11.57□□□□□ -0.56
CCDC188-201ENST00000439765 ODF1Q14990 250 aa11.57□□□□□ -0.56
CCDC188-201ENST00000439765 OR10D4PQ8NGN7 298 aa11.57□□□□□ -0.56
CCDC188-201ENST00000439765 CHTOPQ9Y3Y2 248 aaKnown RBP11.57□□□□□ -0.56
CCDC188-201ENST00000439765 LINC01620Q4KN68 170 aa11.56□□□□□ -0.56
CCDC188-201ENST00000439765 C14orf177Q52M58 125 aa11.56□□□□□ -0.56
CCDC188-201ENST00000439765 LINC00242Q5T6M2 205 aa11.56□□□□□ -0.56
CCDC188-201ENST00000439765 CHCHD10Q8WYQ3 142 aaPredicted RBP11.56□□□□□ -0.56
CCDC188-201ENST00000439765 A0A0J9YXV3 536 aa11.55□□□□□ -0.56
CCDC188-201ENST00000439765 LOC105371267A0A1B0GV96 52 aa11.55□□□□□ -0.56
CCDC188-201ENST00000439765 GAGE12HA6NDE8 117 aa11.55□□□□□ -0.56
CCDC188-201ENST00000439765 MRPL35Q9NZE8 188 aaKnown RBP11.55□□□□□ -0.56
CCDC188-201ENST00000439765 EPM2AB3EWF7 344 aa11.54□□□□□ -0.56
CCDC188-201ENST00000439765 F8VRH5 84 aa11.54□□□□□ -0.56
CCDC188-201ENST00000439765 SEC11AP67812 179 aa11.54□□□□□ -0.56
CCDC188-201ENST00000439765 FAT1Q14517 4588 aa11.54□□□□□ -0.56
CCDC188-201ENST00000439765 IGLV4-69A0A075B6H9 119 aa11.53□□□□□ -0.56
CCDC188-201ENST00000439765 TINCRA0A1B0GVN0 87 aa11.53□□□□□ -0.56
CCDC188-201ENST00000439765 IGLC3P0DOY3 106 aa11.53□□□□□ -0.56
CCDC188-201ENST00000439765 XCL1P47992 114 aa11.53□□□□□ -0.56
CCDC188-201ENST00000439765 COX6A2Q02221 97 aa11.53□□□□□ -0.56
CCDC188-201ENST00000439765 LINC01545Q5VT33 79 aa11.53□□□□□ -0.56
CCDC188-201ENST00000439765 HERVK_113P63121 156 aa11.52□□□□□ -0.56
CCDC188-201ENST00000439765 HAMPP81172 84 aa11.52□□□□□ -0.56
CCDC188-201ENST00000439765 CD164L2Q6UWJ8 174 aa11.52□□□□□ -0.56
CCDC188-201ENST00000439765 PMCHL2Q9BQD1 86 aa11.51□□□□□ -0.57
CCDC188-201ENST00000439765 GEMIN7Q9H840 131 aaKnown RBP11.51□□□□□ -0.57
CCDC188-201ENST00000439765 IGHV3OR16-9A0A0B4J2B5 98 aa11.51□□□□□ -0.57
CCDC188-201ENST00000439765 hDV102S1A0JD36 115 aa11.51□□□□□ -0.57
CCDC188-201ENST00000439765 DMBT1Q9UGM3 2413 aaPredicted RBP11.5□□□□□ -0.57
CCDC188-201ENST00000439765 C11orf86A6NJI1 115 aa11.5□□□□□ -0.57
CCDC188-201ENST00000439765 DPM2O94777 84 aa11.5□□□□□ -0.57
CCDC188-201ENST00000439765 FOXI1Q12951 378 aa11.5□□□□□ -0.57
CCDC188-201ENST00000439765 CHAC1Q9BUX1 264 aa11.5□□□□□ -0.57
CCDC188-201ENST00000439765 FLG2Q5D862 2391 aaPredicted RBP11.49□□□□□ -0.57
CCDC188-201ENST00000439765 C20orf202A1L168 122 aa11.49□□□□□ -0.57
CCDC188-201ENST00000439765 C15orf56Q8N910 161 aa11.49□□□□□ -0.57
CCDC188-201ENST00000439765 IGLV5-45A0A087WSX0 123 aa11.48□□□□□ -0.57
CCDC188-201ENST00000439765 IGKCP01834 107 aa11.48□□□□□ -0.57
CCDC188-201ENST00000439765 PLNP26678 52 aa11.48□□□□□ -0.57
CCDC188-201ENST00000439765 FAM30AQ9NZY2 134 aa11.48□□□□□ -0.57
CCDC188-201ENST00000439765 CDKN2A-AS1Q9UH64 79 aa11.48□□□□□ -0.57
CCDC188-201ENST00000439765 HIGD2BQ4VC39 106 aa11.47□□□□□ -0.57
CCDC188-201ENST00000439765 Q5VSD8 79 aa11.47□□□□□ -0.57
CCDC188-201ENST00000439765 C5orf38Q86SI9 138 aa11.47□□□□□ -0.57
CCDC188-201ENST00000439765 LINC00469Q8N7U9 141 aa11.47□□□□□ -0.57
CCDC188-201ENST00000439765 SCGB1D1O95968 90 aa11.46□□□□□ -0.57
CCDC188-201ENST00000439765 ZNF22P17026 224 aaPredicted RBP11.46□□□□□ -0.57
CCDC188-201ENST00000439765 A0A087WZ39 114 aa11.45□□□□□ -0.58
CCDC188-201ENST00000439765 COX7A2LO14548 114 aa11.45□□□□□ -0.58
CCDC188-201ENST00000439765 AKR1D1P51857 326 aa11.45□□□□□ -0.58
CCDC188-201ENST00000439765 JOSD1Q15040 202 aaPredicted RBP11.45□□□□□ -0.58
CCDC188-201ENST00000439765 TMEM170BQ5T4T1 132 aa11.45□□□□□ -0.58
CCDC188-201ENST00000439765 CFAP161Q6P656 301 aa11.44□□□□□ -0.58
CCDC188-201ENST00000439765 LINC01561Q8N1V8 128 aa11.44□□□□□ -0.58
CCDC188-201ENST00000439765 H3BRM9 83 aa11.44□□□□□ -0.58
CCDC188-201ENST00000439765 Q6ZSA8 131 aa11.44□□□□□ -0.58
CCDC188-201ENST00000439765 CNBPP62633 177 aaKnown RBP11.43□□□□□ -0.58
CCDC188-201ENST00000439765 SRRM2Q9UQ35 2752 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms