RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 UBE2AP49459 152 aa5.43□□□□□ -1.54
SMPD4-208ENST00000439029 KIAA0087Q14695 138 aa5.43□□□□□ -1.54
SMPD4-208ENST00000439029 SFT2D1Q8WV19 159 aa5.43□□□□□ -1.54
SMPD4-208ENST00000439029 FCGBPQ9Y6R7 5405 aaPredicted RBP5.43□□□□□ -1.54
SMPD4-208ENST00000439029 IGHV3OR16-9A0A0B4J2B5 98 aa5.42□□□□□ -1.54
SMPD4-208ENST00000439029 FCER1GP30273 86 aa5.42□□□□□ -1.54
SMPD4-208ENST00000439029 SMIM15Q7Z3B0 74 aa5.42□□□□□ -1.54
SMPD4-208ENST00000439029 MRPL55Q7Z7F7 128 aaKnown RBP5.42□□□□□ -1.54
SMPD4-208ENST00000439029 CYTL1Q9NRR1 136 aa5.42□□□□□ -1.54
SMPD4-208ENST00000439029 TRBV30A0A0K0K1B3 111 aa5.41□□□□□ -1.54
SMPD4-208ENST00000439029 LCE2BO14633 110 aa5.41□□□□□ -1.54
SMPD4-208ENST00000439029 POLR2KP53803 58 aaKnown RBP5.41□□□□□ -1.54
SMPD4-208ENST00000439029 TEX261Q6UWH6 196 aa5.41□□□□□ -1.54
SMPD4-208ENST00000439029 NUDT10Q8NFP7 164 aa5.41□□□□□ -1.54
SMPD4-208ENST00000439029 NUDT11Q96G61 164 aa5.41□□□□□ -1.54
SMPD4-208ENST00000439029 PACRGQ96M98 296 aaPredicted RBP5.41□□□□□ -1.54
SMPD4-208ENST00000439029 ZNF727A8MUV8 499 aa5.4□□□□□ -1.54
SMPD4-208ENST00000439029 UPK1BO75841 260 aa5.4□□□□□ -1.54
SMPD4-208ENST00000439029 KRTAP13-1Q8IUC0 172 aa5.4□□□□□ -1.54
SMPD4-208ENST00000439029 KCNRGQ8N5I3 272 aa5.4□□□□□ -1.54
SMPD4-208ENST00000439029 FAM213BQ8TBF2 198 aa5.4□□□□□ -1.54
SMPD4-208ENST00000439029 LINC00167Q96N53 147 aa5.4□□□□□ -1.54
SMPD4-208ENST00000439029 CNFNQ9BYD5 112 aa5.4□□□□□ -1.54
SMPD4-208ENST00000439029 CSDC2Q9Y534 153 aaKnown RBP5.4□□□□□ -1.54
SMPD4-208ENST00000439029 IGLV8-61A0A075B6I0 122 aa5.39□□□□□ -1.55
SMPD4-208ENST00000439029 TRBV27A0A0K0K1C4 114 aa5.39□□□□□ -1.55
SMPD4-208ENST00000439029 SMKR1H3BMG3 65 aa5.39□□□□□ -1.55
SMPD4-208ENST00000439029 GNG4P50150 75 aa5.39□□□□□ -1.55
SMPD4-208ENST00000439029 CTAG1AP78358 180 aa5.39□□□□□ -1.55
SMPD4-208ENST00000439029 PRLHP81277 87 aa5.39□□□□□ -1.55
SMPD4-208ENST00000439029 DAND5Q8N907 189 aa5.39□□□□□ -1.55
SMPD4-208ENST00000439029 FXYD6-FXYD2A0A087WZ82 144 aa5.38□□□□□ -1.55
SMPD4-208ENST00000439029 IFITM3Q01628 133 aa5.38□□□□□ -1.55
SMPD4-208ENST00000439029 PCOTHQ58A44 107 aa5.38□□□□□ -1.55
SMPD4-208ENST00000439029 XP32Q5T750 250 aa5.38□□□□□ -1.55
SMPD4-208ENST00000439029 SPAG11AQ6PDA7 123 aa5.38□□□□□ -1.55
SMPD4-208ENST00000439029 FAM104AQ969W3 186 aa5.38□□□□□ -1.55
SMPD4-208ENST00000439029 FLGP20930 4061 aaPredicted RBP5.38□□□□□ -1.55
SMPD4-208ENST00000439029 MACF1Q9UPN3 7388 aaKnown RBP5.37□□□□□ -1.55
SMPD4-208ENST00000439029 A0A1B0GVG6 124 aa5.37□□□□□ -1.55
SMPD4-208ENST00000439029 IFITM10A6NMD0 228 aa5.37□□□□□ -1.55
SMPD4-208ENST00000439029 RPL39P62891 51 aaKnown RBP5.37□□□□□ -1.55
SMPD4-208ENST00000439029 RPL32P62910 135 aaKnown RBP5.37□□□□□ -1.55
SMPD4-208ENST00000439029 MBD3L1Q8WWY6 194 aa5.37□□□□□ -1.55
SMPD4-208ENST00000439029 TRBV20OR9-2A0A075B6H5 130 aa5.36□□□□□ -1.55
SMPD4-208ENST00000439029 TGIF2-C20orf24A0A0A6YYL0 155 aa5.36□□□□□ -1.55
SMPD4-208ENST00000439029 KRTAP4-16G5E9R7 235 aaPredicted RBP5.36□□□□□ -1.55
SMPD4-208ENST00000439029 VCYO14598 125 aa5.36□□□□□ -1.55
SMPD4-208ENST00000439029 CCL20P78556 96 aa5.36□□□□□ -1.55
SMPD4-208ENST00000439029 SMAGPQ0VAQ4 97 aa5.36□□□□□ -1.55
SMPD4-208ENST00000439029 PNRC1Q12796 327 aaPredicted RBP5.36□□□□□ -1.55
SMPD4-208ENST00000439029 C11orf52Q96A22 123 aa5.36□□□□□ -1.55
SMPD4-208ENST00000439029 TOMM7Q9P0U1 55 aa5.36□□□□□ -1.55
SMPD4-208ENST00000439029 GNG13Q9P2W3 67 aa5.36□□□□□ -1.55
SMPD4-208ENST00000439029 TP73-AS1Q9UF72 201 aa5.36□□□□□ -1.55
SMPD4-208ENST00000439029 SCO1O75880 301 aa5.35□□□□□ -1.55
SMPD4-208ENST00000439029 Q8NBF4 154 aa5.35□□□□□ -1.55
SMPD4-208ENST00000439029 IGKV2-28A0A075B6P5 120 aa5.34□□□□□ -1.55
SMPD4-208ENST00000439029 IGKV2D-28P01615 120 aa5.34□□□□□ -1.55
SMPD4-208ENST00000439029 RAB4AP20338 218 aa5.34□□□□□ -1.55
SMPD4-208ENST00000439029 HBBP68871 147 aa5.34□□□□□ -1.55
SMPD4-208ENST00000439029 AMN1Q8IY45 258 aa5.34□□□□□ -1.55
SMPD4-208ENST00000439029 TIMM21Q9BVV7 248 aa5.34□□□□□ -1.55
SMPD4-208ENST00000439029 H2AFB1P0C5Y9 115 aa5.33□□□□□ -1.56
SMPD4-208ENST00000439029 CKS1BP61024 79 aa5.33□□□□□ -1.56
SMPD4-208ENST00000439029 COX6B2Q6YFQ2 88 aa5.33□□□□□ -1.56
SMPD4-208ENST00000439029 FAM19A1Q7Z5A9 133 aa5.33□□□□□ -1.56
SMPD4-208ENST00000439029 TMEM18Q96B42 140 aa5.33□□□□□ -1.56
SMPD4-208ENST00000439029 PLEKHB2Q96CS7 222 aa5.33□□□□□ -1.56
SMPD4-208ENST00000439029 FAM210AQ96ND0 272 aa5.33□□□□□ -1.56
SMPD4-208ENST00000439029 KIR2DL4Q99706 377 aa5.33□□□□□ -1.56
SMPD4-208ENST00000439029 MED9Q9NWA0 146 aa5.33□□□□□ -1.56
SMPD4-208ENST00000439029 K7EN84 100 aa5.32□□□□□ -1.56
SMPD4-208ENST00000439029 PRSS2P07478 247 aa5.32□□□□□ -1.56
SMPD4-208ENST00000439029 SUMO2P61956 95 aaKnown RBP5.32□□□□□ -1.56
SMPD4-208ENST00000439029 NRACQ8N912 160 aa5.32□□□□□ -1.56
SMPD4-208ENST00000439029 BIN3Q9NQY0 253 aa5.32□□□□□ -1.56
SMPD4-208ENST00000439029 TMEM238C9JI98 176 aa5.31□□□□□ -1.56
SMPD4-208ENST00000439029 KRTAP19-1Q8IUB9 90 aa5.31□□□□□ -1.56
SMPD4-208ENST00000439029 SMIM12Q96EX1 92 aa5.31□□□□□ -1.56
SMPD4-208ENST00000439029 NDUFA12Q9UI09 145 aa5.31□□□□□ -1.56
SMPD4-208ENST00000439029 ARPC5O15511 151 aa5.3□□□□□ -1.56
SMPD4-208ENST00000439029 C6orf226Q5I0X4 101 aa5.3□□□□□ -1.56
SMPD4-208ENST00000439029 OCC1Q8TAD7 63 aa5.3□□□□□ -1.56
SMPD4-208ENST00000439029 MANBALQ9NQG1 85 aa5.3□□□□□ -1.56
SMPD4-208ENST00000439029 GATCO43716 136 aaKnown RBP5.29□□□□□ -1.56
SMPD4-208ENST00000439029 TNFRSF6BO95407 300 aa5.29□□□□□ -1.56
SMPD4-208ENST00000439029 MRPS36P82909 103 aaKnown RBP5.29□□□□□ -1.56
SMPD4-208ENST00000439029 ZC2HC1BQ5TFG8 222 aa5.29□□□□□ -1.56
SMPD4-208ENST00000439029 CBLN2Q8IUK8 224 aa5.29□□□□□ -1.56
SMPD4-208ENST00000439029 NKAPP1Q8N9T2 125 aa5.29□□□□□ -1.56
SMPD4-208ENST00000439029 BORCS7Q96B45 105 aa5.29□□□□□ -1.56
SMPD4-208ENST00000439029 HIGD2AQ9BW72 106 aa5.29□□□□□ -1.56
SMPD4-208ENST00000439029 TMEM191AQ9H0A3 160 aa5.29□□□□□ -1.56
SMPD4-208ENST00000439029 SPANXA1Q9NS26 97 aa5.29□□□□□ -1.56
SMPD4-208ENST00000439029 SPINK1P00995 79 aa5.28□□□□□ -1.56
SMPD4-208ENST00000439029 GIPP09681 153 aaPredicted RBP5.28□□□□□ -1.56
SMPD4-208ENST00000439029 S100ZQ8WXG8 99 aa5.28□□□□□ -1.56
SMPD4-208ENST00000439029 SPRR4Q96PI1 79 aa5.28□□□□□ -1.56
SMPD4-208ENST00000439029 ALKBH7Q9BT30 221 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms