RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 RNASE13Q5GAN3 156 aaKnown RBP1.13□□□□□ -2.23
HMGB1P18-201ENST00000438801 SPANXN5Q5MJ07 72 aa1.13□□□□□ -2.23
HMGB1P18-201ENST00000438801 MINOS1Q5TGZ0 78 aa1.13□□□□□ -2.23
HMGB1P18-201ENST00000438801 SAMD13Q5VXD3 122 aa1.13□□□□□ -2.23
HMGB1P18-201ENST00000438801 Q6Q795 121 aa1.13□□□□□ -2.23
HMGB1P18-201ENST00000438801 CYP2G1PQ6ZSU1 146 aa1.13□□□□□ -2.23
HMGB1P18-201ENST00000438801 ATP5L2Q7Z4Y8 100 aa1.13□□□□□ -2.23
HMGB1P18-201ENST00000438801 ORMDL3Q8N138 153 aa1.13□□□□□ -2.23
HMGB1P18-201ENST00000438801 FAM24BQ8N5W8 94 aa1.13□□□□□ -2.23
HMGB1P18-201ENST00000438801 FAM216BQ8N7L0 139 aa1.13□□□□□ -2.23
HMGB1P18-201ENST00000438801 RNASE11Q8TAA1 199 aaKnown RBP1.13□□□□□ -2.23
HMGB1P18-201ENST00000438801 VSTM2AQ8TAG5 236 aa1.13□□□□□ -2.23
HMGB1P18-201ENST00000438801 FAM213BQ8TBF2 198 aa1.13□□□□□ -2.23
HMGB1P18-201ENST00000438801 HIST1H2BAQ96A08 127 aa1.13□□□□□ -2.23
HMGB1P18-201ENST00000438801 TVP23CQ96ET8 276 aa1.13□□□□□ -2.23
HMGB1P18-201ENST00000438801 ZNF714Q96N38 554 aa1.13□□□□□ -2.23
HMGB1P18-201ENST00000438801 GPR82Q96P67 336 aa1.13□□□□□ -2.23
HMGB1P18-201ENST00000438801 NPCDR1Q9BY65 106 aa1.13□□□□□ -2.23
HMGB1P18-201ENST00000438801 SMIM3Q9BZL3 60 aa1.13□□□□□ -2.23
HMGB1P18-201ENST00000438801 IMUPQ9GZP8 106 aa1.13□□□□□ -2.23
HMGB1P18-201ENST00000438801 COMMD5Q9GZQ3 224 aa1.13□□□□□ -2.23
HMGB1P18-201ENST00000438801 TMEM126AQ9H061 195 aa1.13□□□□□ -2.23
HMGB1P18-201ENST00000438801 TMEM133Q9H2Q1 129 aa1.13□□□□□ -2.23
HMGB1P18-201ENST00000438801 MANBALQ9NQG1 85 aa1.13□□□□□ -2.23
HMGB1P18-201ENST00000438801 TMEM167BQ9NRX6 74 aa1.13□□□□□ -2.23
HMGB1P18-201ENST00000438801 METTL1Q9UBP6 276 aaKnown RBP1.13□□□□□ -2.23
HMGB1P18-201ENST00000438801 NAT8Q9UHE5 227 aa1.13□□□□□ -2.23
HMGB1P18-201ENST00000438801 PKIGQ9Y2B9 76 aa1.13□□□□□ -2.23
HMGB1P18-201ENST00000438801 MINOS1-NBL1R4GNA1 71 aa1.13□□□□□ -2.23
HMGB1P18-201ENST00000438801 IGKV1D-37A0A075B6S9 117 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 IGKV1OR2-108A0A075B7D4 117 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 IGHV3-49A0A0A0MS15 119 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 TRAV3A0A0B4J244 114 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 TRBV6-1A0A0K0K1D8 114 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 IGLC7A0M8Q6 106 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 IZUMO1RA6ND01 250 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 CEBPZOSA8MTT3 80 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 ZNF727A8MUV8 499 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 ODF3BA8MYP8 253 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 C1orf196B1AJZ1 125 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 C9JCJ5 164 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 BUB1B-PAK6H3BSN5 160 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 CORTO00230 105 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 NDUFA3O95167 84 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 GYPAP02724 150 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 IGKV1-16P04430 117 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 S100A8P05109 93 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 SAA1P0DJI8 122 aaPredicted RBP1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 IAPPP10997 89 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 ORM2P19652 201 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 FGF7P21781 194 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 NPPCP23582 126 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 GCHFRP30047 84 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 EDDM3BP56851 147 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 TAS2R45P59539 299 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 RPS20P60866 119 aaKnown RBP1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 YPEL3P61236 119 aaPredicted RBP1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 KLRD1Q13241 179 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 ELOBQ15370 118 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 VMA21Q3ZAQ7 101 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 SPINT4Q6UDR6 99 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 LCN15Q6UWW0 184 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 TMEM256Q8N2U0 113 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 ANKRD29Q8N6D5 301 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 Q8N6K4 173 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 SPANXA2-OT1Q8N9U9 137 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 OR8B3Q8NGG8 313 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 C4orf3Q8WVX3 66 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 FAM167A-AS1Q96KT0 104 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 OR8B2Q96RD0 313 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 PFDN5Q99471 154 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 TRGV9Q99603 122 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 MGST2Q99735 147 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 MRPL32Q9BYC8 188 aaKnown RBP1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 TMEM14CQ9P0S9 112 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 GNG13Q9P2W3 67 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 FUT9Q9Y231 359 aa1.12□□□□□ -2.23
HMGB1P18-201ENST00000438801 TRAV30A0A087WSZ9 112 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 IGHV3-21A0A0B4J1V1 117 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 TRAV4A0A0B4J268 109 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 IGHV1-3A0A0C4DH29 117 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 UBE2L5PA0A1B0GUS4 154 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 TMEM189A5PLL7 270 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 ZNF98A6NK75 572 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 A8MUN3 132 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 E7EUB6 86 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 H7BYZ3 331 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 I3L2K1 104 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 M0R381 172 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 OR7C2O60412 319 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 HYPMO75409 117 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 MT2AP02795 61 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 SMIM6P0DI80 62 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 ARL14EPLP0DKL9 152 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 IGHV3-30-3P0DP02 117 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 HIST1H1BP16401 226 aaKnown RBP1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 CCL3L1P16619 93 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 EVI2AP22794 236 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 S100A7P31151 101 aa1.11□□□□□ -2.23
HMGB1P18-201ENST00000438801 RPL27AP46776 148 aaKnown RBP1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms