RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 CIB3Q96Q77 187 aaPredicted RBP0.89□□□□□ -2.27
TRAPPC13-204ENST00000438419 LIMD2Q9BT23 127 aa0.89□□□□□ -2.27
TRAPPC13-204ENST00000438419 SPTBP11277 2137 aa0.88□□□□□ -2.27
TRAPPC13-204ENST00000438419 CLPSL1A2RUU4 121 aa0.88□□□□□ -2.27
TRAPPC13-204ENST00000438419 DPM2O94777 84 aa0.88□□□□□ -2.27
TRAPPC13-204ENST00000438419 IGLV3-1P01715 115 aa0.88□□□□□ -2.27
TRAPPC13-204ENST00000438419 HBDP02042 147 aa0.88□□□□□ -2.27
TRAPPC13-204ENST00000438419 HMGN1P05114 100 aa0.88□□□□□ -2.27
TRAPPC13-204ENST00000438419 SCTP09683 121 aa0.88□□□□□ -2.27
TRAPPC13-204ENST00000438419 SDC4P31431 198 aa0.88□□□□□ -2.27
TRAPPC13-204ENST00000438419 LSM3P62310 102 aaKnown RBP0.88□□□□□ -2.27
TRAPPC13-204ENST00000438419 SARNPP82979 210 aaKnown RBP0.88□□□□□ -2.27
TRAPPC13-204ENST00000438419 PRB3Q04118 309 aaPredicted RBP0.88□□□□□ -2.27
TRAPPC13-204ENST00000438419 LINC00299Q6ZSB3 139 aa0.88□□□□□ -2.27
TRAPPC13-204ENST00000438419 C5orf17Q8NAS9 161 aa0.88□□□□□ -2.27
TRAPPC13-204ENST00000438419 MAFIPQ8WZ33 124 aa0.88□□□□□ -2.27
TRAPPC13-204ENST00000438419 LRP1Q07954 4544 aaKnown RBP0.87□□□□□ -2.27
TRAPPC13-204ENST00000438419 DNAH5Q8TE73 4624 aa0.87□□□□□ -2.27
TRAPPC13-204ENST00000438419 USH2AO75445 5202 aa0.87□□□□□ -2.27
TRAPPC13-204ENST00000438419 SLC25A5P05141 298 aaKnown RBP0.87□□□□□ -2.27
TRAPPC13-204ENST00000438419 CD14P08571 375 aa0.87□□□□□ -2.27
TRAPPC13-204ENST00000438419 MORN2Q502X0 79 aa0.87□□□□□ -2.27
TRAPPC13-204ENST00000438419 Q5XG85 94 aa0.87□□□□□ -2.27
TRAPPC13-204ENST00000438419 SBSPONQ8IVN8 264 aa0.87□□□□□ -2.27
TRAPPC13-204ENST00000438419 MPC1Q9Y5U8 109 aa0.87□□□□□ -2.27
TRAPPC13-204ENST00000438419 DSPPQ9NZW4 1301 aa0.86□□□□□ -2.27
TRAPPC13-204ENST00000438419 A0A0D9SFI3 127 aa0.86□□□□□ -2.27
TRAPPC13-204ENST00000438419 A0A0J9YY99 117 aa0.86□□□□□ -2.27
TRAPPC13-204ENST00000438419 TMEM189A5PLL7 270 aa0.86□□□□□ -2.27
TRAPPC13-204ENST00000438419 UQCRQO14949 82 aa0.86□□□□□ -2.27
TRAPPC13-204ENST00000438419 TNFP01375 233 aa0.86□□□□□ -2.27
TRAPPC13-204ENST00000438419 MT-ND4LP03901 98 aa0.86□□□□□ -2.27
TRAPPC13-204ENST00000438419 TCRAP04437 139 aa0.86□□□□□ -2.27
TRAPPC13-204ENST00000438419 DBIP07108 87 aaKnown RBP0.86□□□□□ -2.27
TRAPPC13-204ENST00000438419 PAEPP09466 180 aa0.86□□□□□ -2.27
TRAPPC13-204ENST00000438419 CMPK1P30085 196 aa0.86□□□□□ -2.27
TRAPPC13-204ENST00000438419 PSPHP78330 225 aa0.86□□□□□ -2.27
TRAPPC13-204ENST00000438419 SMCO1Q147U7 214 aa0.86□□□□□ -2.27
TRAPPC13-204ENST00000438419 CCDC153Q494R4 210 aa0.86□□□□□ -2.27
TRAPPC13-204ENST00000438419 OCIAD2Q56VL3 154 aa0.86□□□□□ -2.27
TRAPPC13-204ENST00000438419 Q8N6K4 173 aa0.86□□□□□ -2.27
TRAPPC13-204ENST00000438419 OR10AC1Q8NH08 325 aa0.86□□□□□ -2.27
TRAPPC13-204ENST00000438419 NINQ8N4C6 2090 aa0.86□□□□□ -2.27
TRAPPC13-204ENST00000438419 A0A1B0GW64 132 aa0.85□□□□□ -2.27
TRAPPC13-204ENST00000438419 BBIP1A8MTZ0 92 aa0.85□□□□□ -2.27
TRAPPC13-204ENST00000438419 C9JAW5 83 aa0.85□□□□□ -2.27
TRAPPC13-204ENST00000438419 EDF1O60869 148 aaKnown RBP0.85□□□□□ -2.27
TRAPPC13-204ENST00000438419 ETV6P41212 452 aa0.85□□□□□ -2.27
TRAPPC13-204ENST00000438419 FXYD4P59646 89 aa0.85□□□□□ -2.27
TRAPPC13-204ENST00000438419 HSD17B12Q53GQ0 312 aa0.85□□□□□ -2.27
TRAPPC13-204ENST00000438419 IZUMO2Q6UXV1 221 aa0.85□□□□□ -2.27
TRAPPC13-204ENST00000438419 OR4S1Q8NGB4 309 aa0.85□□□□□ -2.27
TRAPPC13-204ENST00000438419 AP1S3Q96PC3 154 aa0.85□□□□□ -2.27
TRAPPC13-204ENST00000438419 LPAR5Q9H1C0 372 aa0.85□□□□□ -2.27
TRAPPC13-204ENST00000438419 CALML5Q9NZT1 146 aa0.85□□□□□ -2.27
TRAPPC13-204ENST00000438419 GSKIPQ9P0R6 139 aa0.85□□□□□ -2.27
TRAPPC13-204ENST00000438419 BOKQ9UMX3 212 aaPredicted RBP0.85□□□□□ -2.27
TRAPPC13-204ENST00000438419 HIGD1AQ9Y241 93 aa0.85□□□□□ -2.27
TRAPPC13-204ENST00000438419 TNXBP22105 4242 aa0.85□□□□□ -2.27
TRAPPC13-204ENST00000438419 MUC5BQ9HC84 5762 aaPredicted RBP0.85□□□□□ -2.27
TRAPPC13-204ENST00000438419 KMT2DO14686 5537 aa0.84□□□□□ -2.27
TRAPPC13-204ENST00000438419 SULT1C4O75897 302 aa0.84□□□□□ -2.27
TRAPPC13-204ENST00000438419 CKS2P33552 79 aa0.84□□□□□ -2.27
TRAPPC13-204ENST00000438419 DNAJB13P59910 316 aa0.84□□□□□ -2.27
TRAPPC13-204ENST00000438419 TMEM244Q5VVB8 128 aa0.84□□□□□ -2.27
TRAPPC13-204ENST00000438419 TCTE3Q8IZS6 198 aa0.84□□□□□ -2.27
TRAPPC13-204ENST00000438419 TCTEX1D1Q8N7M0 179 aa0.84□□□□□ -2.27
TRAPPC13-204ENST00000438419 OTOSQ8NHW6 89 aa0.84□□□□□ -2.27
TRAPPC13-204ENST00000438419 PVALEFA0A1B0GWK0 134 aa0.83□□□□□ -2.28
TRAPPC13-204ENST00000438419 A0A1W2PPB8 328 aa0.83□□□□□ -2.28
TRAPPC13-204ENST00000438419 A0A1W2PRS3 328 aa0.83□□□□□ -2.28
TRAPPC13-204ENST00000438419 IFITM5A6NNB3 132 aa0.83□□□□□ -2.28
TRAPPC13-204ENST00000438419 KIR3DP1A8MWS1 328 aa0.83□□□□□ -2.28
TRAPPC13-204ENST00000438419 OR2H2O95918 312 aa0.83□□□□□ -2.28
TRAPPC13-204ENST00000438419 SMR3BP02814 79 aaPredicted RBP0.83□□□□□ -2.28
TRAPPC13-204ENST00000438419 KRTAP2-3P0C7H8 128 aa0.83□□□□□ -2.28
TRAPPC13-204ENST00000438419 MPC1LP0DKB6 136 aa0.83□□□□□ -2.28
TRAPPC13-204ENST00000438419 PDE6GP18545 87 aa0.83□□□□□ -2.28
TRAPPC13-204ENST00000438419 CKS1BP61024 79 aa0.83□□□□□ -2.28
TRAPPC13-204ENST00000438419 PCBD1P61457 104 aa0.83□□□□□ -2.28
TRAPPC13-204ENST00000438419 SNRPFP62306 86 aaKnown RBP0.83□□□□□ -2.28
TRAPPC13-204ENST00000438419 CCSMST1Q4G0I0 132 aa0.83□□□□□ -2.28
TRAPPC13-204ENST00000438419 LINC00575Q6W349 94 aa0.83□□□□□ -2.28
TRAPPC13-204ENST00000438419 C3orf62Q6ZUJ4 267 aa0.83□□□□□ -2.28
TRAPPC13-204ENST00000438419 SMIM7Q9BQ49 75 aa0.83□□□□□ -2.28
TRAPPC13-204ENST00000438419 KRTAP2-4Q9BYR9 128 aa0.83□□□□□ -2.28
TRAPPC13-204ENST00000438419 BPESC1Q9GZL8 116 aa0.83□□□□□ -2.28
TRAPPC13-204ENST00000438419 TCHHQ07283 1943 aa0.82□□□□□ -2.28
TRAPPC13-204ENST00000438419 IGHV1-24A0A0C4DH33 117 aa0.82□□□□□ -2.28
TRAPPC13-204ENST00000438419 CDC42EP2O14613 210 aa0.82□□□□□ -2.28
TRAPPC13-204ENST00000438419 IGHV3-30P01768 117 aa0.82□□□□□ -2.28
TRAPPC13-204ENST00000438419 IGHV3-30-5P0DP03 117 aa0.82□□□□□ -2.28
TRAPPC13-204ENST00000438419 RPL37AP61513 92 aaKnown RBP0.82□□□□□ -2.28
TRAPPC13-204ENST00000438419 QRFPP83859 136 aa0.82□□□□□ -2.28
TRAPPC13-204ENST00000438419 SMIM21Q3B7S5 101 aa0.82□□□□□ -2.28
TRAPPC13-204ENST00000438419 CSAG1Q6PB30 78 aa0.82□□□□□ -2.28
TRAPPC13-204ENST00000438419 ZNF720Q7Z2F6 126 aa0.82□□□□□ -2.28
TRAPPC13-204ENST00000438419 LZICQ8WZA0 190 aa0.82□□□□□ -2.28
TRAPPC13-204ENST00000438419 BANF2Q9H503 90 aa0.82□□□□□ -2.28
TRAPPC13-204ENST00000438419 DOCK11Q5JSL3 2073 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms