RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 TRBV24-1A0A075B6N3 115 aa5.47□□□□□ -1.53
HERPUD2-206ENST00000438224 LINC00959A0A1B0GUT2 108 aa5.47□□□□□ -1.53
HERPUD2-206ENST00000438224 A0A1B0GW15 77 aa5.47□□□□□ -1.53
HERPUD2-206ENST00000438224 C7orf77A4D0Y5 90 aa5.47□□□□□ -1.53
HERPUD2-206ENST00000438224 D6R8Y8 96 aa5.47□□□□□ -1.53
HERPUD2-206ENST00000438224 ZNF25P17030 456 aaPredicted RBP5.47□□□□□ -1.53
HERPUD2-206ENST00000438224 CNBPP62633 177 aaKnown RBP5.47□□□□□ -1.53
HERPUD2-206ENST00000438224 RNASE13Q5GAN3 156 aaKnown RBP5.47□□□□□ -1.53
HERPUD2-206ENST00000438224 SDIM1Q6ZPB5 146 aa5.47□□□□□ -1.53
HERPUD2-206ENST00000438224 OR5A1Q8NGJ0 315 aa5.47□□□□□ -1.53
HERPUD2-206ENST00000438224 CDC42SE2Q9NRR3 84 aa5.47□□□□□ -1.53
HERPUD2-206ENST00000438224 MYCBP2O75592 4640 aa5.47□□□□□ -1.53
HERPUD2-206ENST00000438224 CCL25O15444 150 aa5.46□□□□□ -1.54
HERPUD2-206ENST00000438224 CKS2P33552 79 aa5.46□□□□□ -1.54
HERPUD2-206ENST00000438224 RAB14P61106 215 aa5.46□□□□□ -1.54
HERPUD2-206ENST00000438224 RPL39P62891 51 aaKnown RBP5.46□□□□□ -1.54
HERPUD2-206ENST00000438224 RPL32P62910 135 aaKnown RBP5.46□□□□□ -1.54
HERPUD2-206ENST00000438224 HIGD2BQ4VC39 106 aa5.46□□□□□ -1.54
HERPUD2-206ENST00000438224 SMIM2Q9BVW6 85 aa5.46□□□□□ -1.54
HERPUD2-206ENST00000438224 UBE2D4Q9Y2X8 147 aa5.46□□□□□ -1.54
HERPUD2-206ENST00000438224 GVQW2A0A096LPI5 108 aaPredicted RBP5.45□□□□□ -1.54
HERPUD2-206ENST00000438224 LINC00862A6NCI5 91 aa5.45□□□□□ -1.54
HERPUD2-206ENST00000438224 PPP1R2P9O14990 202 aa5.45□□□□□ -1.54
HERPUD2-206ENST00000438224 PPP1R17O96001 155 aa5.45□□□□□ -1.54
HERPUD2-206ENST00000438224 CHTF8P0CG12 524 aa5.45□□□□□ -1.54
HERPUD2-206ENST00000438224 FCER1GP30273 86 aa5.45□□□□□ -1.54
HERPUD2-206ENST00000438224 XCL1P47992 114 aa5.45□□□□□ -1.54
HERPUD2-206ENST00000438224 RPL24P83731 157 aaKnown RBP5.45□□□□□ -1.54
HERPUD2-206ENST00000438224 CIRBPQ14011 172 aaKnown RBP5.45□□□□□ -1.54
HERPUD2-206ENST00000438224 Q6ZUT4 128 aa5.45□□□□□ -1.54
HERPUD2-206ENST00000438224 ZNF664Q8N3J9 261 aa5.45□□□□□ -1.54
HERPUD2-206ENST00000438224 LINC00526Q96FQ7 95 aa5.45□□□□□ -1.54
HERPUD2-206ENST00000438224 BTF3L4Q96K17 158 aa5.45□□□□□ -1.54
HERPUD2-206ENST00000438224 C20orf78Q9BR46 151 aa5.45□□□□□ -1.54
HERPUD2-206ENST00000438224 F8W036 122 aa5.44□□□□□ -1.54
HERPUD2-206ENST00000438224 TCAPO15273 167 aa5.44□□□□□ -1.54
HERPUD2-206ENST00000438224 S100A8P05109 93 aa5.44□□□□□ -1.54
HERPUD2-206ENST00000438224 ATP5L2Q7Z4Y8 100 aa5.44□□□□□ -1.54
HERPUD2-206ENST00000438224 PRR26Q8N8Z3 221 aa5.44□□□□□ -1.54
HERPUD2-206ENST00000438224 TMEM101Q96IK0 257 aa5.44□□□□□ -1.54
HERPUD2-206ENST00000438224 KIR2DL4Q99706 377 aa5.44□□□□□ -1.54
HERPUD2-206ENST00000438224 OPRPNQ99935 248 aaPredicted RBP5.44□□□□□ -1.54
HERPUD2-206ENST00000438224 CSDC2Q9Y534 153 aaKnown RBP5.44□□□□□ -1.54
HERPUD2-206ENST00000438224 IGLV5-37A0A075B6J1 123 aa5.43□□□□□ -1.54
HERPUD2-206ENST00000438224 TMEM218A2RU14 115 aa5.43□□□□□ -1.54
HERPUD2-206ENST00000438224 PHOX2AO14813 284 aa5.43□□□□□ -1.54
HERPUD2-206ENST00000438224 MT-ND4LP03901 98 aa5.43□□□□□ -1.54
HERPUD2-206ENST00000438224 KRTAP19-4Q3LI73 84 aa5.43□□□□□ -1.54
HERPUD2-206ENST00000438224 PRELID3AQ96N28 172 aa5.43□□□□□ -1.54
HERPUD2-206ENST00000438224 TIMM21Q9BVV7 248 aa5.43□□□□□ -1.54
HERPUD2-206ENST00000438224 IGHV3-64A0A075B6Q5 118 aa5.42□□□□□ -1.54
HERPUD2-206ENST00000438224 PPBPP02775 128 aa5.42□□□□□ -1.54
HERPUD2-206ENST00000438224 HNRNPA3P51991 378 aaKnown RBP5.42□□□□□ -1.54
HERPUD2-206ENST00000438224 TMEM136Q6ZRR5 245 aa5.42□□□□□ -1.54
HERPUD2-206ENST00000438224 ORMDL3Q8N138 153 aa5.42□□□□□ -1.54
HERPUD2-206ENST00000438224 A0A087WYN8 130 aa5.41□□□□□ -1.54
HERPUD2-206ENST00000438224 TRAV13-1A0A0B4J241 112 aa5.41□□□□□ -1.54
HERPUD2-206ENST00000438224 SEC61GP60059 68 aa5.41□□□□□ -1.54
HERPUD2-206ENST00000438224 COX6A2Q02221 97 aa5.41□□□□□ -1.54
HERPUD2-206ENST00000438224 SS18Q15532 418 aa5.41□□□□□ -1.54
HERPUD2-206ENST00000438224 UQCC3Q6UW78 93 aa5.41□□□□□ -1.54
HERPUD2-206ENST00000438224 SPACA4Q8TDM5 124 aa5.41□□□□□ -1.54
HERPUD2-206ENST00000438224 A0A087WZ39 114 aa5.4□□□□□ -1.54
HERPUD2-206ENST00000438224 A0A096LNI7 61 aa5.4□□□□□ -1.54
HERPUD2-206ENST00000438224 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.4□□□□□ -1.54
HERPUD2-206ENST00000438224 IGHV1-58A0A0C4DH39 117 aa5.4□□□□□ -1.54
HERPUD2-206ENST00000438224 LOC389332A0A1B0GUA5 103 aa5.4□□□□□ -1.54
HERPUD2-206ENST00000438224 C5orf38Q86SI9 138 aa5.4□□□□□ -1.54
HERPUD2-206ENST00000438224 COMMD7Q86VX2 200 aa5.4□□□□□ -1.54
HERPUD2-206ENST00000438224 SPANXA1Q9NS26 97 aa5.4□□□□□ -1.54
HERPUD2-206ENST00000438224 PKHD1L1Q86WI1 4243 aa5.4□□□□□ -1.55
HERPUD2-206ENST00000438224 C1orf196B1AJZ1 125 aa5.39□□□□□ -1.55
HERPUD2-206ENST00000438224 MRPS36P82909 103 aaKnown RBP5.39□□□□□ -1.55
HERPUD2-206ENST00000438224 SRSF9Q13242 221 aaKnown RBP eCLIP5.39□□□□□ -1.55
HERPUD2-206ENST00000438224 LINC00173Q6ZV60 143 aa5.39□□□□□ -1.55
HERPUD2-206ENST00000438224 LINC00518Q8N0U6 118 aa5.39□□□□□ -1.55
HERPUD2-206ENST00000438224 SEC11CQ9BY50 192 aa5.39□□□□□ -1.55
HERPUD2-206ENST00000438224 IGLV4-69A0A075B6H9 119 aa5.38□□□□□ -1.55
HERPUD2-206ENST00000438224 IGLV4-3A0A075B6K6 122 aa5.38□□□□□ -1.55
HERPUD2-206ENST00000438224 IGLV5-45A0A087WSX0 123 aa5.38□□□□□ -1.55
HERPUD2-206ENST00000438224 IGHV3OR16-9A0A0B4J2B5 98 aa5.38□□□□□ -1.55
HERPUD2-206ENST00000438224 IGKV2-24A0A0C4DH68 120 aa5.38□□□□□ -1.55
HERPUD2-206ENST00000438224 COX7A2LO14548 114 aa5.38□□□□□ -1.55
HERPUD2-206ENST00000438224 RPL37AP61513 92 aaKnown RBP5.38□□□□□ -1.55
HERPUD2-206ENST00000438224 KIAA1644Q3SXP7 199 aa5.38□□□□□ -1.55
HERPUD2-206ENST00000438224 C10orf91Q5T1B1 145 aa5.38□□□□□ -1.55
HERPUD2-206ENST00000438224 ZC2HC1BQ5TFG8 222 aa5.38□□□□□ -1.55
HERPUD2-206ENST00000438224 Q6ZRU5 148 aa5.38□□□□□ -1.55
HERPUD2-206ENST00000438224 Q8N8P6 123 aa5.38□□□□□ -1.55
HERPUD2-206ENST00000438224 CARD19Q96LW7 228 aa5.38□□□□□ -1.55
HERPUD2-206ENST00000438224 IMMP2LQ96T52 175 aa5.38□□□□□ -1.55
HERPUD2-206ENST00000438224 MAP1LC3AQ9H492 121 aa5.38□□□□□ -1.55
HERPUD2-206ENST00000438224 PLAC8Q9NZF1 115 aa5.38□□□□□ -1.55
HERPUD2-206ENST00000438224 LAMTOR2Q9Y2Q5 125 aa5.38□□□□□ -1.55
HERPUD2-206ENST00000438224 IGLV9-49A0A0B4J1Y8 123 aa5.37□□□□□ -1.55
HERPUD2-206ENST00000438224 IFITM10A6NMD0 228 aa5.37□□□□□ -1.55
HERPUD2-206ENST00000438224 PRSS2P07478 247 aa5.37□□□□□ -1.55
HERPUD2-206ENST00000438224 SYCNQ0VAF6 134 aa5.37□□□□□ -1.55
HERPUD2-206ENST00000438224 SMAGPQ0VAQ4 97 aa5.37□□□□□ -1.55
HERPUD2-206ENST00000438224 CARHSP1Q9Y2V2 147 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms