RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 TCAPO15273 167 aa8.72□□□□□ -1.01
CDC42EP1-204ENST00000434728 ZNF56Q15929 161 aa8.72□□□□□ -1.01
CDC42EP1-204ENST00000434728 IFI27L1Q96BM0 104 aa8.72□□□□□ -1.01
CDC42EP1-204ENST00000434728 MGPP08493 103 aa8.71□□□□□ -1.02
CDC42EP1-204ENST00000434728 KRTAP10-4P60372 401 aaPredicted RBP8.71□□□□□ -1.02
CDC42EP1-204ENST00000434728 LINC00173Q6ZV60 143 aa8.71□□□□□ -1.02
CDC42EP1-204ENST00000434728 C14orf144Q96I85 54 aa8.71□□□□□ -1.02
CDC42EP1-204ENST00000434728 CHCHD5Q9BSY4 110 aa8.71□□□□□ -1.02
CDC42EP1-204ENST00000434728 LRP1Q07954 4544 aaKnown RBP8.7□□□□□ -1.02
CDC42EP1-204ENST00000434728 HMCN2Q8NDA2 5059 aa8.7□□□□□ -1.02
CDC42EP1-204ENST00000434728 TRBV6-8A0A0A6YYG3 113 aa8.7□□□□□ -1.02
CDC42EP1-204ENST00000434728 USP17L23D6RBM5 183 aa8.7□□□□□ -1.02
CDC42EP1-204ENST00000434728 H7C1H1 209 aa8.7□□□□□ -1.02
CDC42EP1-204ENST00000434728 GAS8-AS1O95177 125 aa8.7□□□□□ -1.02
CDC42EP1-204ENST00000434728 IGLC3P0DOY3 106 aa8.7□□□□□ -1.02
CDC42EP1-204ENST00000434728 UBE2D3P61077 147 aa8.7□□□□□ -1.02
CDC42EP1-204ENST00000434728 UBE2D2P62837 147 aa8.7□□□□□ -1.02
CDC42EP1-204ENST00000434728 UBR4Q5T4S7 5183 aa8.69□□□□□ -1.02
CDC42EP1-204ENST00000434728 TRAV26-2A0A0B4J265 109 aa8.69□□□□□ -1.02
CDC42EP1-204ENST00000434728 MPV17L2Q567V2 206 aa8.69□□□□□ -1.02
CDC42EP1-204ENST00000434728 SUMO4Q6EEV6 95 aa8.69□□□□□ -1.02
CDC42EP1-204ENST00000434728 MIAQ16674 131 aa8.68□□□□□ -1.02
CDC42EP1-204ENST00000434728 ENHOQ6UWT2 76 aa8.68□□□□□ -1.02
CDC42EP1-204ENST00000434728 PMCHL2Q9BQD1 86 aa8.68□□□□□ -1.02
CDC42EP1-204ENST00000434728 TRBV27A0A0K0K1C4 114 aa8.67□□□□□ -1.02
CDC42EP1-204ENST00000434728 F5H697 171 aa8.67□□□□□ -1.02
CDC42EP1-204ENST00000434728 VCYO14598 125 aa8.67□□□□□ -1.02
CDC42EP1-204ENST00000434728 POLR2KP53803 58 aaKnown RBP8.67□□□□□ -1.02
CDC42EP1-204ENST00000434728 CLPSL2Q6UWE3 100 aa8.67□□□□□ -1.02
CDC42EP1-204ENST00000434728 TOMM6Q96B49 74 aa8.67□□□□□ -1.02
CDC42EP1-204ENST00000434728 DPH3Q96FX2 82 aa8.67□□□□□ -1.02
CDC42EP1-204ENST00000434728 TRAV12-1A0A0B4J245 112 aa8.66□□□□□ -1.02
CDC42EP1-204ENST00000434728 M0QY20 66 aa8.66□□□□□ -1.02
CDC42EP1-204ENST00000434728 M0R143 59 aa8.66□□□□□ -1.02
CDC42EP1-204ENST00000434728 TMEM97Q5BJF2 176 aa8.66□□□□□ -1.02
CDC42EP1-204ENST00000434728 DGAT2L7PQ6IED9 249 aa8.66□□□□□ -1.02
CDC42EP1-204ENST00000434728 RPL39LQ96EH5 51 aaKnown RBP8.66□□□□□ -1.02
CDC42EP1-204ENST00000434728 KIR2DL4Q99706 377 aa8.66□□□□□ -1.02
CDC42EP1-204ENST00000434728 C2orf88Q9BSF0 95 aa8.66□□□□□ -1.02
CDC42EP1-204ENST00000434728 PRSS1P07477 247 aa8.65□□□□□ -1.02
CDC42EP1-204ENST00000434728 ATOH7Q8N100 152 aa8.65□□□□□ -1.02
CDC42EP1-204ENST00000434728 NEXN-AS1Q8NBZ9 246 aa8.65□□□□□ -1.02
CDC42EP1-204ENST00000434728 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.64□□□□□ -1.03
CDC42EP1-204ENST00000434728 HNRNPA3P51991 378 aaKnown RBP8.64□□□□□ -1.03
CDC42EP1-204ENST00000434728 ODF1Q14990 250 aa8.64□□□□□ -1.03
CDC42EP1-204ENST00000434728 LINC00269Q8N2A0 174 aa8.64□□□□□ -1.03
CDC42EP1-204ENST00000434728 C9orf163Q8N9P6 203 aa8.64□□□□□ -1.03
CDC42EP1-204ENST00000434728 CYSLTR1Q9Y271 337 aa8.64□□□□□ -1.03
CDC42EP1-204ENST00000434728 FAT3Q8TDW7 4589 aa8.64□□□□□ -1.03
CDC42EP1-204ENST00000434728 TRBV25-1A0A075B6N4 114 aa8.63□□□□□ -1.03
CDC42EP1-204ENST00000434728 SDHAF1A6NFY7 115 aa8.63□□□□□ -1.03
CDC42EP1-204ENST00000434728 DLEU1O43261 78 aa8.63□□□□□ -1.03
CDC42EP1-204ENST00000434728 GAGE6Q13070 117 aa8.63□□□□□ -1.03
CDC42EP1-204ENST00000434728 SLC25A34Q6PIV7 304 aa8.63□□□□□ -1.03
CDC42EP1-204ENST00000434728 hDV102S1A0JD36 115 aa8.62□□□□□ -1.03
CDC42EP1-204ENST00000434728 DPM2O94777 84 aa8.62□□□□□ -1.03
CDC42EP1-204ENST00000434728 NPSP0C0P6 89 aa8.62□□□□□ -1.03
CDC42EP1-204ENST00000434728 COX8AP10176 69 aa8.62□□□□□ -1.03
CDC42EP1-204ENST00000434728 PLNP26678 52 aa8.62□□□□□ -1.03
CDC42EP1-204ENST00000434728 RBX1P62877 108 aa8.62□□□□□ -1.03
CDC42EP1-204ENST00000434728 C2orf66Q6UXQ4 117 aa8.62□□□□□ -1.03
CDC42EP1-204ENST00000434728 Q6ZN92 141 aa8.62□□□□□ -1.03
CDC42EP1-204ENST00000434728 ERASQ7Z444 233 aa8.62□□□□□ -1.03
CDC42EP1-204ENST00000434728 TMEM141Q96I45 108 aa8.62□□□□□ -1.03
CDC42EP1-204ENST00000434728 TIMM17AQ99595 171 aa8.62□□□□□ -1.03
CDC42EP1-204ENST00000434728 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.62□□□□□ -1.03
CDC42EP1-204ENST00000434728 IGLV10-54A0A075B6I4 117 aa8.61□□□□□ -1.03
CDC42EP1-204ENST00000434728 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.61□□□□□ -1.03
CDC42EP1-204ENST00000434728 H0Y8G0 127 aa8.61□□□□□ -1.03
CDC42EP1-204ENST00000434728 MAJINQ3KP22 176 aa8.61□□□□□ -1.03
CDC42EP1-204ENST00000434728 SCGB3A1Q96QR1 104 aa8.61□□□□□ -1.03
CDC42EP1-204ENST00000434728 IGHV3-64A0A075B6Q5 118 aa8.6□□□□□ -1.03
CDC42EP1-204ENST00000434728 F8VRH5 84 aa8.6□□□□□ -1.03
CDC42EP1-204ENST00000434728 I3L3M4 83 aa8.6□□□□□ -1.03
CDC42EP1-204ENST00000434728 IGKCP01834 107 aa8.6□□□□□ -1.03
CDC42EP1-204ENST00000434728 PAPPA-AS1Q5QFB9 102 aa8.6□□□□□ -1.03
CDC42EP1-204ENST00000434728 Q6ZRU5 148 aa8.6□□□□□ -1.03
CDC42EP1-204ENST00000434728 SNHG12Q9BXW3 62 aa8.6□□□□□ -1.03
CDC42EP1-204ENST00000434728 PRR34Q9NV39 138 aa8.6□□□□□ -1.03
CDC42EP1-204ENST00000434728 PKHD1L1Q86WI1 4243 aa8.6□□□□□ -1.03
CDC42EP1-204ENST00000434728 REG3AQ06141 175 aa8.59□□□□□ -1.03
CDC42EP1-204ENST00000434728 SDIM1Q6ZPB5 146 aa8.59□□□□□ -1.03
CDC42EP1-204ENST00000434728 PANO1I0J062 215 aa8.58□□□□□ -1.04
CDC42EP1-204ENST00000434728 NTM-AS1Q6ZSK4 140 aa8.58□□□□□ -1.04
CDC42EP1-204ENST00000434728 IGIPA6NJ69 53 aa8.57□□□□□ -1.04
CDC42EP1-204ENST00000434728 TSHBP01222 138 aa8.57□□□□□ -1.04
CDC42EP1-204ENST00000434728 BOD1L2Q8IYS8 172 aa8.57□□□□□ -1.04
CDC42EP1-204ENST00000434728 C7orf33Q8WU49 177 aa8.57□□□□□ -1.04
CDC42EP1-204ENST00000434728 TRAV8-4A0A0B4J246 113 aa8.56□□□□□ -1.04
CDC42EP1-204ENST00000434728 UBE2L6O14933 153 aa8.56□□□□□ -1.04
CDC42EP1-204ENST00000434728 CNBPP62633 177 aaKnown RBP8.56□□□□□ -1.04
CDC42EP1-204ENST00000434728 ANKRD39Q53RE8 183 aa8.56□□□□□ -1.04
CDC42EP1-204ENST00000434728 C20orf203Q8NBC4 194 aa8.56□□□□□ -1.04
CDC42EP1-204ENST00000434728 TMEM243Q9BU79 118 aa8.56□□□□□ -1.04
CDC42EP1-204ENST00000434728 MRPL35Q9NZE8 188 aaKnown RBP8.56□□□□□ -1.04
CDC42EP1-204ENST00000434728 CHTOPQ9Y3Y2 248 aaKnown RBP8.56□□□□□ -1.04
CDC42EP1-204ENST00000434728 PYGO1Q9Y3Y4 419 aa8.56□□□□□ -1.04
CDC42EP1-204ENST00000434728 FGF6P10767 208 aa8.55□□□□□ -1.04
CDC42EP1-204ENST00000434728 PMVKQ15126 192 aa8.55□□□□□ -1.04
CDC42EP1-204ENST00000434728 COL5A1-AS1Q5SY13 56 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms