RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 RUSC1-AS1Q66K80 236 aa2.73□□□□□ -1.97
SHPRH-205ENST00000433355 NDUFV3P56181 108 aaKnown RBP2.73□□□□□ -1.97
SHPRH-205ENST00000433355 IGHV3-49A0A0A0MS15 119 aa2.73□□□□□ -1.97
SHPRH-205ENST00000433355 PRAC2D3DTV9 90 aa2.73□□□□□ -1.97
SHPRH-205ENST00000433355 NUPR1O60356 82 aa2.73□□□□□ -1.97
SHPRH-205ENST00000433355 CD24P25063 80 aa2.73□□□□□ -1.97
SHPRH-205ENST00000433355 PRYO14603 147 aa2.73□□□□□ -1.97
SHPRH-205ENST00000433355 SMIM1B2RUZ4 78 aa2.73□□□□□ -1.97
SHPRH-205ENST00000433355 GYPEP15421 78 aa2.73□□□□□ -1.97
SHPRH-205ENST00000433355 XCL2Q9UBD3 114 aa2.73□□□□□ -1.97
SHPRH-205ENST00000433355 A0A0J9YWU9 116 aa2.73□□□□□ -1.97
SHPRH-205ENST00000433355 IGHV4-30-4P0DP06 118 aa2.73□□□□□ -1.97
SHPRH-205ENST00000433355 CDC42SE2Q9NRR3 84 aa2.72□□□□□ -1.97
SHPRH-205ENST00000433355 RPL39LQ96EH5 51 aaKnown RBP2.72□□□□□ -1.97
SHPRH-205ENST00000433355 H3BPC8 53 aa2.72□□□□□ -1.97
SHPRH-205ENST00000433355 DIRC1Q969H9 104 aa2.72□□□□□ -1.97
SHPRH-205ENST00000433355 ZNF625Q96I27 306 aaPredicted RBP2.72□□□□□ -1.97
SHPRH-205ENST00000433355 IGHV3OR16-9A0A0B4J2B5 98 aa2.72□□□□□ -1.97
SHPRH-205ENST00000433355 URB1-AS1Q96HZ7 61 aa2.72□□□□□ -1.97
SHPRH-205ENST00000433355 MGAQ8IWI9 3026 aa2.72□□□□□ -1.97
SHPRH-205ENST00000433355 C17orf77Q96MU5 243 aa2.72□□□□□ -1.97
SHPRH-205ENST00000433355 IGHV3OR16-12A0A075B7B8 117 aa2.72□□□□□ -1.97
SHPRH-205ENST00000433355 SPINK2P20155 84 aa2.72□□□□□ -1.97
SHPRH-205ENST00000433355 TRAV10A0A0B4J240 114 aa2.72□□□□□ -1.97
SHPRH-205ENST00000433355 SMKR1H3BMG3 65 aa2.72□□□□□ -1.97
SHPRH-205ENST00000433355 SPRY2O43597 315 aa2.72□□□□□ -1.97
SHPRH-205ENST00000433355 LINC01006Q8NI28 216 aa2.72□□□□□ -1.97
SHPRH-205ENST00000433355 C11orf21Q9P2W6 132 aa2.72□□□□□ -1.97
SHPRH-205ENST00000433355 LOC100131303A0A0U1RQF7 123 aa2.72□□□□□ -1.97
SHPRH-205ENST00000433355 LOC107984640A0A0U1RRK4 108 aa2.72□□□□□ -1.97
SHPRH-205ENST00000433355 LINC00242Q5T6M2 205 aa2.72□□□□□ -1.97
SHPRH-205ENST00000433355 REG3AQ06141 175 aa2.72□□□□□ -1.97
SHPRH-205ENST00000433355 M0R378 163 aa2.71□□□□□ -1.97
SHPRH-205ENST00000433355 ZNF73O43830 326 aaPredicted RBP2.71□□□□□ -1.97
SHPRH-205ENST00000433355 MP68P56378 58 aa2.71□□□□□ -1.97
SHPRH-205ENST00000433355 RPS28P62857 69 aaKnown RBP2.71□□□□□ -1.97
SHPRH-205ENST00000433355 RNF224P0DH78 156 aa2.71□□□□□ -1.97
SHPRH-205ENST00000433355 SPAG11BQ08648 103 aa2.71□□□□□ -1.97
SHPRH-205ENST00000433355 MRPL55Q7Z7F7 128 aaKnown RBP2.71□□□□□ -1.97
SHPRH-205ENST00000433355 SERP2Q8N6R1 65 aa2.71□□□□□ -1.97
SHPRH-205ENST00000433355 C3orf56Q8N813 242 aa2.71□□□□□ -1.97
SHPRH-205ENST00000433355 MSRB1Q9NZV6 116 aa2.71□□□□□ -1.97
SHPRH-205ENST00000433355 LINC00694P0DN24 101 aa2.71□□□□□ -1.98
SHPRH-205ENST00000433355 HTN1P15515 57 aa2.71□□□□□ -1.98
SHPRH-205ENST00000433355 NUPR2A6NF83 97 aa2.71□□□□□ -1.98
SHPRH-205ENST00000433355 C20orf173Q96LM9 149 aa2.71□□□□□ -1.98
SHPRH-205ENST00000433355 IGHV3OR16-8A0A075B7F1 116 aa2.71□□□□□ -1.98
SHPRH-205ENST00000433355 IGHV3-23P01764 117 aa2.71□□□□□ -1.98
SHPRH-205ENST00000433355 NOP10Q9NPE3 64 aaKnown RBP2.71□□□□□ -1.98
SHPRH-205ENST00000433355 CDKN2A-AS1Q9UH64 79 aa2.71□□□□□ -1.98
SHPRH-205ENST00000433355 S4R3C0 116 aa2.71□□□□□ -1.98
SHPRH-205ENST00000433355 UBE2BP63146 152 aa2.71□□□□□ -1.98
SHPRH-205ENST00000433355 GNRH2O43555 120 aa2.71□□□□□ -1.98
SHPRH-205ENST00000433355 TCL1BO95988 128 aa2.71□□□□□ -1.98
SHPRH-205ENST00000433355 DEFB130BP0DP73 79 aa2.71□□□□□ -1.98
SHPRH-205ENST00000433355 DEFB130AP0DP74 79 aa2.71□□□□□ -1.98
SHPRH-205ENST00000433355 COX7BP24311 80 aa2.71□□□□□ -1.98
SHPRH-205ENST00000433355 GAGE2AQ6NT46 116 aa2.71□□□□□ -1.98
SHPRH-205ENST00000433355 LINC00526Q96FQ7 95 aa2.71□□□□□ -1.98
SHPRH-205ENST00000433355 F5H768 121 aa2.71□□□□□ -1.98
SHPRH-205ENST00000433355 PROK1P58294 105 aa2.71□□□□□ -1.98
SHPRH-205ENST00000433355 TOMM7Q9P0U1 55 aa2.71□□□□□ -1.98
SHPRH-205ENST00000433355 LY6HO94772 140 aa2.7□□□□□ -1.98
SHPRH-205ENST00000433355 BAALC-AS2P0C853 105 aa2.7□□□□□ -1.98
SHPRH-205ENST00000433355 ZNF843Q8N446 348 aa2.7□□□□□ -1.98
SHPRH-205ENST00000433355 RBMY1FQ15415 496 aaKnown RBP2.7□□□□□ -1.98
SHPRH-205ENST00000433355 CAMK2N2Q96S95 79 aa2.7□□□□□ -1.98
SHPRH-205ENST00000433355 TRIAP1O43715 76 aa2.7□□□□□ -1.98
SHPRH-205ENST00000433355 LINC01556Q5JQF7 62 aa2.7□□□□□ -1.98
SHPRH-205ENST00000433355 MUSTN1Q8IVN3 82 aa2.7□□□□□ -1.98
SHPRH-205ENST00000433355 IGKV3-7A0A075B6H7 116 aa2.7□□□□□ -1.98
SHPRH-205ENST00000433355 VPREB1P12018 145 aa2.7□□□□□ -1.98
SHPRH-205ENST00000433355 PRR9Q5T870 116 aa2.7□□□□□ -1.98
SHPRH-205ENST00000433355 TGP01266 2768 aa2.7□□□□□ -1.98
SHPRH-205ENST00000433355 SLURP1P55000 103 aa2.7□□□□□ -1.98
SHPRH-205ENST00000433355 ANGP03950 147 aaKnown RBP2.7□□□□□ -1.98
SHPRH-205ENST00000433355 RPL39P62891 51 aaKnown RBP2.7□□□□□ -1.98
SHPRH-205ENST00000433355 NTN5Q8WTR8 489 aaPredicted RBP2.7□□□□□ -1.98
SHPRH-205ENST00000433355 H7C2G1 150 aa2.69□□□□□ -1.98
SHPRH-205ENST00000433355 CHCHD10Q8WYQ3 142 aaPredicted RBP2.69□□□□□ -1.98
SHPRH-205ENST00000433355 IGHV3-64A0A075B6Q5 118 aa2.69□□□□□ -1.98
SHPRH-205ENST00000433355 MRAPQ8TCY5 172 aa2.69□□□□□ -1.98
SHPRH-205ENST00000433355 NPC2P61916 151 aa2.69□□□□□ -1.98
SHPRH-205ENST00000433355 IGHV3-38A0A0C4DH36 116 aa2.69□□□□□ -1.98
SHPRH-205ENST00000433355 PRR34Q9NV39 138 aa2.69□□□□□ -1.98
SHPRH-205ENST00000433355 PRO0461Q9UI25 63 aa2.69□□□□□ -1.98
SHPRH-205ENST00000433355 RANBP2P49792 3224 aaKnown RBP2.69□□□□□ -1.98
SHPRH-205ENST00000433355 DNAH12Q6ZR08 3092 aa2.69□□□□□ -1.98
SHPRH-205ENST00000433355 IGFL4Q6B9Z1 124 aa2.69□□□□□ -1.98
SHPRH-205ENST00000433355 CLEC2BQ92478 149 aa2.68□□□□□ -1.98
SHPRH-205ENST00000433355 KNCNA6PVL3 124 aa2.68□□□□□ -1.98
SHPRH-205ENST00000433355 J3KRW8 73 aa2.68□□□□□ -1.98
SHPRH-205ENST00000433355 C9orf153Q5TBE3 101 aa2.68□□□□□ -1.98
SHPRH-205ENST00000433355 A0A1W2PPR1 153 aa2.68□□□□□ -1.98
SHPRH-205ENST00000433355 HIGD2AQ9BW72 106 aa2.68□□□□□ -1.98
SHPRH-205ENST00000433355 Q6ZTI0 123 aa2.68□□□□□ -1.98
SHPRH-205ENST00000433355 CRYGAP11844 174 aa2.68□□□□□ -1.98
SHPRH-205ENST00000433355 TP53AIP1Q9HCN2 124 aa2.68□□□□□ -1.98
SHPRH-205ENST00000433355 PLA2G2DQ9UNK4 145 aa2.68□□□□□ -1.98
SHPRH-205ENST00000433355 K7ERJ3 54 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms