RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 MRPL51Q4U2R6 128 aaKnown RBP11□□□□□ -0.65
GPC1-203ENST00000425056 ATP5L2Q7Z4Y8 100 aa11□□□□□ -0.65
GPC1-203ENST00000425056 TRAV13-1A0A0B4J241 112 aa10.99□□□□□ -0.65
GPC1-203ENST00000425056 ATP6V1G1O75348 118 aa10.99□□□□□ -0.65
GPC1-203ENST00000425056 S100A8P05109 93 aa10.99□□□□□ -0.65
GPC1-203ENST00000425056 RPL32P62910 135 aaKnown RBP10.99□□□□□ -0.65
GPC1-203ENST00000425056 SRSF9Q13242 221 aaKnown RBP eCLIP10.99□□□□□ -0.65
GPC1-203ENST00000425056 REG3GQ6UW15 175 aa10.99□□□□□ -0.65
GPC1-203ENST00000425056 TMEM18Q96B42 140 aa10.99□□□□□ -0.65
GPC1-203ENST00000425056 C2orf48Q96LS8 159 aa10.99□□□□□ -0.65
GPC1-203ENST00000425056 CAMK2N2Q96S95 79 aa10.99□□□□□ -0.65
GPC1-203ENST00000425056 C20orf78Q9BR46 151 aa10.99□□□□□ -0.65
GPC1-203ENST00000425056 LRP2P98164 4655 aa10.98□□□□□ -0.65
GPC1-203ENST00000425056 TRBV24-1A0A075B6N3 115 aa10.98□□□□□ -0.65
GPC1-203ENST00000425056 APOMO95445 188 aa10.98□□□□□ -0.65
GPC1-203ENST00000425056 GAGE2BQ13066 116 aa10.98□□□□□ -0.65
GPC1-203ENST00000425056 C5orf38Q86SI9 138 aa10.97□□□□□ -0.65
GPC1-203ENST00000425056 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.96□□□□□ -0.65
GPC1-203ENST00000425056 TCAPO15273 167 aa10.96□□□□□ -0.65
GPC1-203ENST00000425056 KRTAP10-8P60410 259 aa10.96□□□□□ -0.65
GPC1-203ENST00000425056 HBBP68871 147 aa10.96□□□□□ -0.65
GPC1-203ENST00000425056 MRPL54Q6P161 138 aaKnown RBP10.96□□□□□ -0.65
GPC1-203ENST00000425056 A0A1B0GXF2 115 aa10.95□□□□□ -0.66
GPC1-203ENST00000425056 A0A1W2PNN7 141 aa10.95□□□□□ -0.66
GPC1-203ENST00000425056 CKS2P33552 79 aa10.95□□□□□ -0.66
GPC1-203ENST00000425056 SPAG11BQ08648 103 aa10.95□□□□□ -0.66
GPC1-203ENST00000425056 ODF1Q14990 250 aa10.95□□□□□ -0.66
GPC1-203ENST00000425056 SMIM2Q9BVW6 85 aa10.95□□□□□ -0.66
GPC1-203ENST00000425056 SMCO4Q9NRQ5 59 aa10.95□□□□□ -0.66
GPC1-203ENST00000425056 TNFRSF6BO95407 300 aa10.94□□□□□ -0.66
GPC1-203ENST00000425056 RPL39P62891 51 aaKnown RBP10.94□□□□□ -0.66
GPC1-203ENST00000425056 OR10D4PQ8NGN7 298 aa10.94□□□□□ -0.66
GPC1-203ENST00000425056 FAM104AQ969W3 186 aa10.94□□□□□ -0.66
GPC1-203ENST00000425056 RPL18AQ02543 176 aaKnown RBP10.93□□□□□ -0.66
GPC1-203ENST00000425056 RNF151Q2KHN1 245 aa10.93□□□□□ -0.66
GPC1-203ENST00000425056 COX19Q49B96 90 aa10.93□□□□□ -0.66
GPC1-203ENST00000425056 C9orf116Q5BN46 136 aaPredicted RBP10.93□□□□□ -0.66
GPC1-203ENST00000425056 SPANXA1Q9NS26 97 aa10.93□□□□□ -0.66
GPC1-203ENST00000425056 D6R8Y8 96 aa10.92□□□□□ -0.66
GPC1-203ENST00000425056 IGHV3OR16-9A0A0B4J2B5 98 aa10.91□□□□□ -0.66
GPC1-203ENST00000425056 MRPS36P82909 103 aaKnown RBP10.91□□□□□ -0.66
GPC1-203ENST00000425056 MRPL35Q9NZE8 188 aaKnown RBP10.91□□□□□ -0.66
GPC1-203ENST00000425056 PSORS1C2Q9UIG4 136 aa10.91□□□□□ -0.66
GPC1-203ENST00000425056 F8WDY8 70 aa10.9□□□□□ -0.66
GPC1-203ENST00000425056 NPYP01303 97 aa10.9□□□□□ -0.66
GPC1-203ENST00000425056 CBLN2Q8IUK8 224 aa10.9□□□□□ -0.66
GPC1-203ENST00000425056 ORAOV1Q8WV07 137 aa10.9□□□□□ -0.66
GPC1-203ENST00000425056 OPRPNQ99935 248 aaPredicted RBP10.9□□□□□ -0.66
GPC1-203ENST00000425056 PPBPP02775 128 aa10.89□□□□□ -0.67
GPC1-203ENST00000425056 IFITM10A6NMD0 228 aa10.88□□□□□ -0.67
GPC1-203ENST00000425056 MT-ND6P03923 174 aa10.88□□□□□ -0.67
GPC1-203ENST00000425056 TGIF2-C20orf24A0A0A6YYL0 155 aa10.87□□□□□ -0.67
GPC1-203ENST00000425056 NDUFA1O15239 70 aa10.87□□□□□ -0.67
GPC1-203ENST00000425056 PHF5AQ7RTV0 110 aaKnown RBP10.87□□□□□ -0.67
GPC1-203ENST00000425056 YPEL4Q96NS1 127 aa10.87□□□□□ -0.67
GPC1-203ENST00000425056 GNB1LQ9BYB4 327 aa10.87□□□□□ -0.67
GPC1-203ENST00000425056 TMEM136Q6ZRR5 245 aa10.86□□□□□ -0.67
GPC1-203ENST00000425056 TLX1NBP0CAT3 122 aa10.85□□□□□ -0.67
GPC1-203ENST00000425056 C1orf137Q5JT78 98 aa10.85□□□□□ -0.67
GPC1-203ENST00000425056 C10orf25Q5T742 122 aa10.85□□□□□ -0.67
GPC1-203ENST00000425056 ORMDL3Q8N138 153 aa10.85□□□□□ -0.67
GPC1-203ENST00000425056 IFI27P40305 119 aaPredicted RBP10.84□□□□□ -0.67
GPC1-203ENST00000425056 A0A087WZ39 114 aa10.83□□□□□ -0.68
GPC1-203ENST00000425056 SCO1O75880 301 aa10.83□□□□□ -0.68
GPC1-203ENST00000425056 UNQ6190/PRO20217Q6UXQ8 127 aa10.83□□□□□ -0.68
GPC1-203ENST00000425056 C6orf48Q9UBA6 75 aa10.83□□□□□ -0.68
GPC1-203ENST00000425056 PYGO1Q9Y3Y4 419 aa10.83□□□□□ -0.68
GPC1-203ENST00000425056 RNF213Q63HN8 5207 aa10.82□□□□□ -0.68
GPC1-203ENST00000425056 IGLV4-3A0A075B6K6 122 aa10.82□□□□□ -0.68
GPC1-203ENST00000425056 RAB5AP20339 215 aa10.82□□□□□ -0.68
GPC1-203ENST00000425056 PRELID3AQ96N28 172 aa10.82□□□□□ -0.68
GPC1-203ENST00000425056 FAM168BA1KXE4 195 aa10.81□□□□□ -0.68
GPC1-203ENST00000425056 KIAA0087Q14695 138 aa10.81□□□□□ -0.68
GPC1-203ENST00000425056 LINC00242Q5T6M2 205 aa10.81□□□□□ -0.68
GPC1-203ENST00000425056 LAMTOR2Q9Y2Q5 125 aa10.81□□□□□ -0.68
GPC1-203ENST00000425056 COLCA2A8K830 154 aa10.8□□□□□ -0.68
GPC1-203ENST00000425056 PRSS47A8MTI9 375 aa10.8□□□□□ -0.68
GPC1-203ENST00000425056 IGLV7-43P04211 117 aa10.8□□□□□ -0.68
GPC1-203ENST00000425056 TMEM141Q96I45 108 aa10.8□□□□□ -0.68
GPC1-203ENST00000425056 MRPL18Q9H0U6 180 aaKnown RBP10.8□□□□□ -0.68
GPC1-203ENST00000425056 TRAPPC1Q9Y5R8 145 aa10.8□□□□□ -0.68
GPC1-203ENST00000425056 FAM19A5Q7Z5A7 132 aaPredicted RBP10.79□□□□□ -0.68
GPC1-203ENST00000425056 KRTAP11-1Q8IUC1 163 aa10.79□□□□□ -0.68
GPC1-203ENST00000425056 DIRC1Q969H9 104 aa10.79□□□□□ -0.68
GPC1-203ENST00000425056 FABP9Q0Z7S8 132 aa10.78□□□□□ -0.68
GPC1-203ENST00000425056 KRTAP7-1Q8IUC3 87 aa10.78□□□□□ -0.68
GPC1-203ENST00000425056 TRBV30A0A0K0K1B3 111 aa10.77□□□□□ -0.69
GPC1-203ENST00000425056 UBE2D1P51668 147 aa10.77□□□□□ -0.69
GPC1-203ENST00000425056 GAGE2EQ4V326 116 aa10.77□□□□□ -0.69
GPC1-203ENST00000425056 TEX43Q6ZNM6 134 aa10.77□□□□□ -0.69
GPC1-203ENST00000425056 MAP1LC3AQ9H492 121 aa10.77□□□□□ -0.69
GPC1-203ENST00000425056 GAGE2DQ9UEU5 116 aa10.77□□□□□ -0.69
GPC1-203ENST00000425056 H0Y9J4 135 aa10.76□□□□□ -0.69
GPC1-203ENST00000425056 LINC01561Q8N1V8 128 aa10.76□□□□□ -0.69
GPC1-203ENST00000425056 NDUFC2-KCTD14E9PQ53 114 aa10.75□□□□□ -0.69
GPC1-203ENST00000425056 M0QXV9 152 aa10.75□□□□□ -0.69
GPC1-203ENST00000425056 KIAA1644Q3SXP7 199 aa10.75□□□□□ -0.69
GPC1-203ENST00000425056 C2orf82Q6UX34 121 aa10.75□□□□□ -0.69
GPC1-203ENST00000425056 LINC00173Q6ZV60 143 aa10.75□□□□□ -0.69
GPC1-203ENST00000425056 C2orf88Q9BSF0 95 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms