RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 TRGC2P03986 189 aa11.93□□□□□ -0.5
HDAC6-205ENST00000423941 LINC01620Q4KN68 170 aa11.93□□□□□ -0.5
HDAC6-205ENST00000423941 PAPPA-AS1Q5QFB9 102 aa11.93□□□□□ -0.5
HDAC6-205ENST00000423941 SCGB3A1Q96QR1 104 aa11.93□□□□□ -0.5
HDAC6-205ENST00000423941 RAB5BP61020 215 aa11.92□□□□□ -0.5
HDAC6-205ENST00000423941 ZC2HC1BQ5TFG8 222 aa11.92□□□□□ -0.5
HDAC6-205ENST00000423941 Q6ZN92 141 aa11.92□□□□□ -0.5
HDAC6-205ENST00000423941 KRTAP17-1Q9BYP8 105 aa11.92□□□□□ -0.5
HDAC6-205ENST00000423941 COX6A2Q02221 97 aa11.91□□□□□ -0.5
HDAC6-205ENST00000423941 SDIM1Q6ZPB5 146 aa11.91□□□□□ -0.5
HDAC6-205ENST00000423941 C5orf38Q86SI9 138 aa11.91□□□□□ -0.5
HDAC6-205ENST00000423941 HSPG2P98160 4391 aa11.9□□□□□ -0.5
HDAC6-205ENST00000423941 SCO1O75880 301 aa11.9□□□□□ -0.5
HDAC6-205ENST00000423941 HIGD2BQ4VC39 106 aa11.9□□□□□ -0.5
HDAC6-205ENST00000423941 C2orf88Q9BSF0 95 aa11.9□□□□□ -0.5
HDAC6-205ENST00000423941 A0A087WZ39 114 aa11.89□□□□□ -0.51
HDAC6-205ENST00000423941 PDZD11Q5EBL8 140 aa11.89□□□□□ -0.51
HDAC6-205ENST00000423941 CHCHD1Q96BP2 118 aaKnown RBP11.89□□□□□ -0.51
HDAC6-205ENST00000423941 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.88□□□□□ -0.51
HDAC6-205ENST00000423941 LINC01561Q8N1V8 128 aa11.88□□□□□ -0.51
HDAC6-205ENST00000423941 IGHV3-64A0A075B6Q5 118 aa11.87□□□□□ -0.51
HDAC6-205ENST00000423941 HBDP02042 147 aa11.87□□□□□ -0.51
HDAC6-205ENST00000423941 MALP21145 153 aa11.87□□□□□ -0.51
HDAC6-205ENST00000423941 APOMO95445 188 aa11.86□□□□□ -0.51
HDAC6-205ENST00000423941 OR10D4PQ8NGN7 298 aa11.86□□□□□ -0.51
HDAC6-205ENST00000423941 CST9LQ9H4G1 147 aa11.86□□□□□ -0.51
HDAC6-205ENST00000423941 DNAH8Q96JB1 4490 aa11.86□□□□□ -0.51
HDAC6-205ENST00000423941 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-205ENST00000423941 SEC11AP67812 179 aa11.85□□□□□ -0.51
HDAC6-205ENST00000423941 PMCHL1Q16048 86 aa11.85□□□□□ -0.51
HDAC6-205ENST00000423941 LINC00526Q96FQ7 95 aa11.85□□□□□ -0.51
HDAC6-205ENST00000423941 C2orf48Q96LS8 159 aa11.85□□□□□ -0.51
HDAC6-205ENST00000423941 IGLV4-69A0A075B6H9 119 aa11.84□□□□□ -0.51
HDAC6-205ENST00000423941 ZNF561-AS1K7EIQ3 104 aa11.84□□□□□ -0.51
HDAC6-205ENST00000423941 LINC00310P59036 64 aa11.84□□□□□ -0.51
HDAC6-205ENST00000423941 CIRBPQ14011 172 aaKnown RBP11.84□□□□□ -0.51
HDAC6-205ENST00000423941 PMVKQ15126 192 aa11.84□□□□□ -0.51
HDAC6-205ENST00000423941 HERVK_113P63121 156 aa11.83□□□□□ -0.52
HDAC6-205ENST00000423941 KIAA0087Q14695 138 aa11.83□□□□□ -0.52
HDAC6-205ENST00000423941 Q8N1X5 172 aa11.83□□□□□ -0.52
HDAC6-205ENST00000423941 CHAC1Q9BUX1 264 aa11.83□□□□□ -0.52
HDAC6-205ENST00000423941 A0A0J9YXV3 536 aa11.82□□□□□ -0.52
HDAC6-205ENST00000423941 F8WDY8 70 aa11.82□□□□□ -0.52
HDAC6-205ENST00000423941 SYCNQ0VAF6 134 aa11.82□□□□□ -0.52
HDAC6-205ENST00000423941 IGLV5-45A0A087WSX0 123 aa11.81□□□□□ -0.52
HDAC6-205ENST00000423941 TINCRA0A1B0GVN0 87 aa11.81□□□□□ -0.52
HDAC6-205ENST00000423941 ATP5LO75964 103 aa11.81□□□□□ -0.52
HDAC6-205ENST00000423941 S100A1P23297 94 aa11.81□□□□□ -0.52
HDAC6-205ENST00000423941 BAGE3Q86Y29 109 aa11.81□□□□□ -0.52
HDAC6-205ENST00000423941 ORAOV1Q8WV07 137 aa11.81□□□□□ -0.52
HDAC6-205ENST00000423941 CDKN2A-AS1Q9UH64 79 aa11.81□□□□□ -0.52
HDAC6-205ENST00000423941 PANO1I0J062 215 aa11.8□□□□□ -0.52
HDAC6-205ENST00000423941 SPAG11BQ08648 103 aa11.8□□□□□ -0.52
HDAC6-205ENST00000423941 CARD19Q96LW7 228 aa11.8□□□□□ -0.52
HDAC6-205ENST00000423941 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.8□□□□□ -0.52
HDAC6-205ENST00000423941 HAMPP81172 84 aa11.79□□□□□ -0.52
HDAC6-205ENST00000423941 Q6ZRU5 148 aa11.79□□□□□ -0.52
HDAC6-205ENST00000423941 SCXQ7RTU7 201 aa11.79□□□□□ -0.52
HDAC6-205ENST00000423941 CIRBP-AS1Q8TBR5 109 aa11.79□□□□□ -0.52
HDAC6-205ENST00000423941 SERF1AO75920 110 aa11.78□□□□□ -0.52
HDAC6-205ENST00000423941 RNF151Q2KHN1 245 aa11.78□□□□□ -0.52
HDAC6-205ENST00000423941 KRTAP4-5Q9BYR2 181 aa11.78□□□□□ -0.52
HDAC6-205ENST00000423941 GEMIN7Q9H840 131 aaKnown RBP11.78□□□□□ -0.52
HDAC6-205ENST00000423941 NUPR1O60356 82 aa11.77□□□□□ -0.53
HDAC6-205ENST00000423941 HSBP1O75506 76 aa11.77□□□□□ -0.53
HDAC6-205ENST00000423941 CAMK2N2Q96S95 79 aa11.77□□□□□ -0.53
HDAC6-205ENST00000423941 MRPL35Q9NZE8 188 aaKnown RBP11.77□□□□□ -0.53
HDAC6-205ENST00000423941 ATP6V1G1O75348 118 aa11.76□□□□□ -0.53
HDAC6-205ENST00000423941 IGLC3P0DOY3 106 aa11.76□□□□□ -0.53
HDAC6-205ENST00000423941 FAM19A2Q8N3H0 131 aa11.76□□□□□ -0.53
HDAC6-205ENST00000423941 HIST1H2BKO60814 126 aa11.75□□□□□ -0.53
HDAC6-205ENST00000423941 HIST1H2BJP06899 126 aa11.75□□□□□ -0.53
HDAC6-205ENST00000423941 HIST1H2BOP23527 126 aa11.75□□□□□ -0.53
HDAC6-205ENST00000423941 HIST1H2BBP33778 126 aa11.75□□□□□ -0.53
HDAC6-205ENST00000423941 HIST1H2BDP58876 126 aa11.75□□□□□ -0.53
HDAC6-205ENST00000423941 HIST1H2BCP62807 126 aa11.75□□□□□ -0.53
HDAC6-205ENST00000423941 HIST2H2BEQ16778 126 aa11.75□□□□□ -0.53
HDAC6-205ENST00000423941 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.75□□□□□ -0.53
HDAC6-205ENST00000423941 SPACA4Q8TDM5 124 aa11.75□□□□□ -0.53
HDAC6-205ENST00000423941 HIST1H2BHQ93079 126 aa11.75□□□□□ -0.53
HDAC6-205ENST00000423941 HIST1H2BNQ99877 126 aa11.75□□□□□ -0.53
HDAC6-205ENST00000423941 HIST1H2BMQ99879 126 aa11.75□□□□□ -0.53
HDAC6-205ENST00000423941 C10orf25Q5T742 122 aa11.74□□□□□ -0.53
HDAC6-205ENST00000423941 Q8IZM0 81 aa11.74□□□□□ -0.53
HDAC6-205ENST00000423941 IFI27L1Q96BM0 104 aa11.74□□□□□ -0.53
HDAC6-205ENST00000423941 TRAV12-1A0A0B4J245 112 aa11.73□□□□□ -0.53
HDAC6-205ENST00000423941 SMIM1B2RUZ4 78 aa11.73□□□□□ -0.53
HDAC6-205ENST00000423941 NDUFA1O15239 70 aa11.73□□□□□ -0.53
HDAC6-205ENST00000423941 SMR3BP02814 79 aaPredicted RBP11.73□□□□□ -0.53
HDAC6-205ENST00000423941 CHTF8P0CG12 524 aa11.73□□□□□ -0.53
HDAC6-205ENST00000423941 UNQ6190/PRO20217Q6UXQ8 127 aa11.73□□□□□ -0.53
HDAC6-205ENST00000423941 LINC00469Q8N7U9 141 aa11.73□□□□□ -0.53
HDAC6-205ENST00000423941 PKIGQ9Y2B9 76 aa11.73□□□□□ -0.53
HDAC6-205ENST00000423941 A0A096LNI7 61 aa11.72□□□□□ -0.53
HDAC6-205ENST00000423941 TLX1NBP0CAT3 122 aa11.71□□□□□ -0.53
HDAC6-205ENST00000423941 NDUFA6P56556 154 aa11.71□□□□□ -0.53
HDAC6-205ENST00000423941 PLAC8Q9NZF1 115 aa11.71□□□□□ -0.53
HDAC6-205ENST00000423941 C6orf48Q9UBA6 75 aa11.71□□□□□ -0.53
HDAC6-205ENST00000423941 A0A087WYN8 130 aa11.7□□□□□ -0.54
HDAC6-205ENST00000423941 LOC107984640A0A0U1RRK4 108 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms