RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 APOMO95445 188 aa10□□□□□ -0.81
COL18A1-205ENST00000423214 RPL32P62910 135 aaKnown RBP10□□□□□ -0.81
COL18A1-205ENST00000423214 TMEM136Q6ZRR5 245 aa10□□□□□ -0.81
COL18A1-205ENST00000423214 Q6ZUT4 128 aa10□□□□□ -0.81
COL18A1-205ENST00000423214 ATP5L2Q7Z4Y8 100 aa10□□□□□ -0.81
COL18A1-205ENST00000423214 TMEM18Q96B42 140 aa10□□□□□ -0.81
COL18A1-205ENST00000423214 PPBPP02775 128 aa9.99□□□□□ -0.81
COL18A1-205ENST00000423214 SPAG11BQ08648 103 aa9.99□□□□□ -0.81
COL18A1-205ENST00000423214 ORMDL3Q8N138 153 aa9.99□□□□□ -0.81
COL18A1-205ENST00000423214 PRELID3AQ96N28 172 aa9.99□□□□□ -0.81
COL18A1-205ENST00000423214 MT-ND6P03923 174 aa9.98□□□□□ -0.81
COL18A1-205ENST00000423214 SRSF9Q13242 221 aaKnown RBP eCLIP9.98□□□□□ -0.81
COL18A1-205ENST00000423214 C5orf38Q86SI9 138 aa9.98□□□□□ -0.81
COL18A1-205ENST00000423214 C2orf48Q96LS8 159 aa9.98□□□□□ -0.81
COL18A1-205ENST00000423214 OPRPNQ99935 248 aaPredicted RBP9.98□□□□□ -0.81
COL18A1-205ENST00000423214 LOC389332A0A1B0GUA5 103 aa9.97□□□□□ -0.81
COL18A1-205ENST00000423214 KRTAP10-8P60410 259 aa9.97□□□□□ -0.81
COL18A1-205ENST00000423214 TIMM21Q9BVV7 248 aa9.97□□□□□ -0.81
COL18A1-205ENST00000423214 A0A1W2PNN7 141 aa9.96□□□□□ -0.82
COL18A1-205ENST00000423214 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.96□□□□□ -0.82
COL18A1-205ENST00000423214 ADCYAP1P18509 176 aa9.96□□□□□ -0.82
COL18A1-205ENST00000423214 C9orf116Q5BN46 136 aaPredicted RBP9.96□□□□□ -0.82
COL18A1-205ENST00000423214 FAM104AQ969W3 186 aa9.96□□□□□ -0.82
COL18A1-205ENST00000423214 OR10D4PQ8NGN7 298 aa9.95□□□□□ -0.82
COL18A1-205ENST00000423214 PSORS1C2Q9UIG4 136 aa9.95□□□□□ -0.82
COL18A1-205ENST00000423214 RNF213Q63HN8 5207 aa9.95□□□□□ -0.82
COL18A1-205ENST00000423214 TMEM218A2RU14 115 aa9.94□□□□□ -0.82
COL18A1-205ENST00000423214 RAB5AP20339 215 aa9.94□□□□□ -0.82
COL18A1-205ENST00000423214 C1orf137Q5JT78 98 aa9.93□□□□□ -0.82
COL18A1-205ENST00000423214 ORAOV1Q8WV07 137 aa9.93□□□□□ -0.82
COL18A1-205ENST00000423214 SPANXA1Q9NS26 97 aa9.93□□□□□ -0.82
COL18A1-205ENST00000423214 RNF151Q2KHN1 245 aa9.92□□□□□ -0.82
COL18A1-205ENST00000423214 UQCC3Q6UW78 93 aa9.92□□□□□ -0.82
COL18A1-205ENST00000423214 PHF5AQ7RTV0 110 aaKnown RBP9.92□□□□□ -0.82
COL18A1-205ENST00000423214 MAP1LC3AQ9H492 121 aa9.92□□□□□ -0.82
COL18A1-205ENST00000423214 PRSS47A8MTI9 375 aa9.91□□□□□ -0.82
COL18A1-205ENST00000423214 NDUFA1O15239 70 aa9.91□□□□□ -0.82
COL18A1-205ENST00000423214 MRPS36P82909 103 aaKnown RBP9.91□□□□□ -0.82
COL18A1-205ENST00000423214 IFITM10A6NMD0 228 aa9.9□□□□□ -0.82
COL18A1-205ENST00000423214 IMMP2LQ96T52 175 aa9.9□□□□□ -0.82
COL18A1-205ENST00000423214 CTDSP1Q9GZU7 261 aa9.9□□□□□ -0.82
COL18A1-205ENST00000423214 MRPL35Q9NZE8 188 aaKnown RBP9.9□□□□□ -0.82
COL18A1-205ENST00000423214 LAMTOR2Q9Y2Q5 125 aa9.9□□□□□ -0.82
COL18A1-205ENST00000423214 F8WDY8 70 aa9.89□□□□□ -0.83
COL18A1-205ENST00000423214 IFI27P40305 119 aaPredicted RBP9.89□□□□□ -0.83
COL18A1-205ENST00000423214 COMMD7Q86VX2 200 aa9.89□□□□□ -0.83
COL18A1-205ENST00000423214 Q8N8P6 123 aa9.89□□□□□ -0.83
COL18A1-205ENST00000423214 TGIF2-C20orf24A0A0A6YYL0 155 aa9.88□□□□□ -0.83
COL18A1-205ENST00000423214 KIAA1644Q3SXP7 199 aa9.88□□□□□ -0.83
COL18A1-205ENST00000423214 DIRC1Q969H9 104 aa9.88□□□□□ -0.83
COL18A1-205ENST00000423214 IGLV4-3A0A075B6K6 122 aa9.87□□□□□ -0.83
COL18A1-205ENST00000423214 IGHV3OR16-9A0A0B4J2B5 98 aa9.87□□□□□ -0.83
COL18A1-205ENST00000423214 ZC2HC1BQ5TFG8 222 aa9.87□□□□□ -0.83
COL18A1-205ENST00000423214 FAM19A5Q7Z5A7 132 aaPredicted RBP9.87□□□□□ -0.83
COL18A1-205ENST00000423214 SEC11CQ9BY50 192 aa9.87□□□□□ -0.83
COL18A1-205ENST00000423214 PYGO1Q9Y3Y4 419 aa9.87□□□□□ -0.83
COL18A1-205ENST00000423214 A0A087WZ39 114 aa9.86□□□□□ -0.83
COL18A1-205ENST00000423214 IGLV7-43P04211 117 aa9.86□□□□□ -0.83
COL18A1-205ENST00000423214 C2orf66Q6UXQ4 117 aa9.85□□□□□ -0.83
COL18A1-205ENST00000423214 TMEM141Q96I45 108 aa9.85□□□□□ -0.83
COL18A1-205ENST00000423214 CYSLTR1Q9Y271 337 aa9.85□□□□□ -0.83
COL18A1-205ENST00000423214 FAM168BA1KXE4 195 aa9.84□□□□□ -0.83
COL18A1-205ENST00000423214 TLX1NBP0CAT3 122 aa9.84□□□□□ -0.83
COL18A1-205ENST00000423214 GAGE2EQ4V326 116 aa9.84□□□□□ -0.83
COL18A1-205ENST00000423214 ORMDL2Q53FV1 153 aa9.84□□□□□ -0.83
COL18A1-205ENST00000423214 LINC00242Q5T6M2 205 aa9.84□□□□□ -0.83
COL18A1-205ENST00000423214 C10orf25Q5T742 122 aa9.84□□□□□ -0.83
COL18A1-205ENST00000423214 UNQ6190/PRO20217Q6UXQ8 127 aa9.84□□□□□ -0.83
COL18A1-205ENST00000423214 C6orf48Q9UBA6 75 aa9.84□□□□□ -0.83
COL18A1-205ENST00000423214 GAGE2DQ9UEU5 116 aa9.84□□□□□ -0.83
COL18A1-205ENST00000423214 H0Y9J4 135 aa9.83□□□□□ -0.84
COL18A1-205ENST00000423214 UBE2BP63146 152 aa9.83□□□□□ -0.84
COL18A1-205ENST00000423214 TEX43Q6ZNM6 134 aa9.83□□□□□ -0.84
COL18A1-205ENST00000423214 TRAV9-1A0A075B6T8 112 aa9.82□□□□□ -0.84
COL18A1-205ENST00000423214 M0QXV9 152 aa9.82□□□□□ -0.84
COL18A1-205ENST00000423214 S100PP25815 95 aa9.82□□□□□ -0.84
COL18A1-205ENST00000423214 PRR26Q8N8Z3 221 aa9.82□□□□□ -0.84
COL18A1-205ENST00000423214 NXT2Q9NPJ8 142 aaKnown RBP9.82□□□□□ -0.84
COL18A1-205ENST00000423214 UBE2D1P51668 147 aa9.81□□□□□ -0.84
COL18A1-205ENST00000423214 LINC00173Q6ZV60 143 aa9.81□□□□□ -0.84
COL18A1-205ENST00000423214 VCX2Q9H322 139 aa9.81□□□□□ -0.84
COL18A1-205ENST00000423214 RPS10P5Q9NQ39 176 aa9.81□□□□□ -0.84
COL18A1-205ENST00000423214 TRBV30A0A0K0K1B3 111 aa9.8□□□□□ -0.84
COL18A1-205ENST00000423214 IGIPA6NJ69 53 aa9.8□□□□□ -0.84
COL18A1-205ENST00000423214 C10orf91Q5T1B1 145 aa9.8□□□□□ -0.84
COL18A1-205ENST00000423214 Q6ZN92 141 aa9.8□□□□□ -0.84
COL18A1-205ENST00000423214 PACRGQ96M98 296 aaPredicted RBP9.8□□□□□ -0.84
COL18A1-205ENST00000423214 C2orf88Q9BSF0 95 aa9.8□□□□□ -0.84
COL18A1-205ENST00000423214 K7EMI3 77 aa9.79□□□□□ -0.84
COL18A1-205ENST00000423214 AMELXQ99217 191 aa9.79□□□□□ -0.84
COL18A1-205ENST00000423214 GNB1LQ9BYB4 327 aa9.79□□□□□ -0.84
COL18A1-205ENST00000423214 LPAP08519 4548 aa9.78□□□□□ -0.84
COL18A1-205ENST00000423214 IGLV1-50A0A075B6I6 118 aa9.78□□□□□ -0.84
COL18A1-205ENST00000423214 KIAA0087Q14695 138 aa9.78□□□□□ -0.84
COL18A1-205ENST00000423214 KRTAP11-1Q8IUC1 163 aa9.78□□□□□ -0.84
COL18A1-205ENST00000423214 CARHSP1Q9Y2V2 147 aaKnown RBP9.78□□□□□ -0.84
COL18A1-205ENST00000423214 NDUFC2-KCTD14E9PQ53 114 aa9.77□□□□□ -0.85
COL18A1-205ENST00000423214 ALKBH7Q9BT30 221 aaPredicted RBP9.77□□□□□ -0.85
COL18A1-205ENST00000423214 PRSS2P07478 247 aa9.76□□□□□ -0.85
COL18A1-205ENST00000423214 FABP9Q0Z7S8 132 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms