RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 EREGO14944 169 aa11.19□□□□□ -0.62
COL7A1-202ENST00000422991 IFI27L1Q96BM0 104 aa11.19□□□□□ -0.62
COL7A1-202ENST00000422991 IGHV3OR16-9A0A0B4J2B5 98 aa11.18□□□□□ -0.62
COL7A1-202ENST00000422991 LEPROTL1O95214 131 aa11.18□□□□□ -0.62
COL7A1-202ENST00000422991 COX7A2LO14548 114 aa11.17□□□□□ -0.62
COL7A1-202ENST00000422991 Q8N814 137 aa11.17□□□□□ -0.62
COL7A1-202ENST00000422991 C15orf56Q8N910 161 aa11.17□□□□□ -0.62
COL7A1-202ENST00000422991 A0A0J9YXV3 536 aa11.16□□□□□ -0.62
COL7A1-202ENST00000422991 COX6A2Q02221 97 aa11.16□□□□□ -0.62
COL7A1-202ENST00000422991 HSPB8Q9UJY1 196 aa11.16□□□□□ -0.62
COL7A1-202ENST00000422991 PKHD1P08F94 4074 aa11.15□□□□□ -0.62
COL7A1-202ENST00000422991 PRSS1P07477 247 aa11.15□□□□□ -0.62
COL7A1-202ENST00000422991 FABP4P15090 132 aa11.15□□□□□ -0.62
COL7A1-202ENST00000422991 SEC11AP67812 179 aa11.15□□□□□ -0.62
COL7A1-202ENST00000422991 C14orf177Q52M58 125 aa11.15□□□□□ -0.62
COL7A1-202ENST00000422991 C5orf38Q86SI9 138 aa11.15□□□□□ -0.62
COL7A1-202ENST00000422991 TRAV12-1A0A0B4J245 112 aa11.14□□□□□ -0.63
COL7A1-202ENST00000422991 TINCRA0A1B0GVN0 87 aa11.14□□□□□ -0.63
COL7A1-202ENST00000422991 KRTAP10-2P60368 255 aa11.14□□□□□ -0.63
COL7A1-202ENST00000422991 HERVK_113P63121 156 aa11.14□□□□□ -0.63
COL7A1-202ENST00000422991 CFAP161Q6P656 301 aa11.14□□□□□ -0.63
COL7A1-202ENST00000422991 PACRGQ96M98 296 aaPredicted RBP11.14□□□□□ -0.63
COL7A1-202ENST00000422991 A0A087WZ39 114 aa11.13□□□□□ -0.63
COL7A1-202ENST00000422991 IGHV1-58A0A0C4DH39 117 aa11.13□□□□□ -0.63
COL7A1-202ENST00000422991 IGLC3P0DOY3 106 aa11.13□□□□□ -0.63
COL7A1-202ENST00000422991 MALP21145 153 aa11.13□□□□□ -0.63
COL7A1-202ENST00000422991 SPATA12Q7Z6I5 190 aa11.13□□□□□ -0.63
COL7A1-202ENST00000422991 GEMIN7Q9H840 131 aaKnown RBP11.13□□□□□ -0.63
COL7A1-202ENST00000422991 IGLV4-69A0A075B6H9 119 aa11.12□□□□□ -0.63
COL7A1-202ENST00000422991 GVQW2A0A096LPI5 108 aaPredicted RBP11.12□□□□□ -0.63
COL7A1-202ENST00000422991 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.11□□□□□ -0.63
COL7A1-202ENST00000422991 IGLV5-45A0A087WSX0 123 aa11.11□□□□□ -0.63
COL7A1-202ENST00000422991 hDV102S1A0JD36 115 aa11.11□□□□□ -0.63
COL7A1-202ENST00000422991 NTN5Q8WTR8 489 aaPredicted RBP11.11□□□□□ -0.63
COL7A1-202ENST00000422991 CHAC1Q9BUX1 264 aa11.11□□□□□ -0.63
COL7A1-202ENST00000422991 CDKN2A-AS1Q9UH64 79 aa11.11□□□□□ -0.63
COL7A1-202ENST00000422991 APOMO95445 188 aa11.1□□□□□ -0.63
COL7A1-202ENST00000422991 S100A6P06703 90 aa11.1□□□□□ -0.63
COL7A1-202ENST00000422991 HIGD2BQ4VC39 106 aa11.1□□□□□ -0.63
COL7A1-202ENST00000422991 LINC01561Q8N1V8 128 aa11.1□□□□□ -0.63
COL7A1-202ENST00000422991 LINC00469Q8N7U9 141 aa11.1□□□□□ -0.63
COL7A1-202ENST00000422991 CHTOPQ9Y3Y2 248 aaKnown RBP11.1□□□□□ -0.63
COL7A1-202ENST00000422991 IGHV3-64A0A075B6Q5 118 aa11.09□□□□□ -0.63
COL7A1-202ENST00000422991 H0Y8G0 127 aa11.09□□□□□ -0.63
COL7A1-202ENST00000422991 FUSP35637 526 aaKnown RBP eCLIP11.09□□□□□ -0.63
COL7A1-202ENST00000422991 ODF1Q14990 250 aa11.09□□□□□ -0.63
COL7A1-202ENST00000422991 CDPF1Q6NVV7 123 aa11.09□□□□□ -0.63
COL7A1-202ENST00000422991 HIST3H2BBQ8N257 126 aa11.09□□□□□ -0.63
COL7A1-202ENST00000422991 MAP1LC3CQ9BXW4 147 aa11.09□□□□□ -0.63
COL7A1-202ENST00000422991 DNAH5Q8TE73 4624 aa11.08□□□□□ -0.63
COL7A1-202ENST00000422991 C11orf86A6NJI1 115 aa11.08□□□□□ -0.64
COL7A1-202ENST00000422991 F8VRH5 84 aa11.08□□□□□ -0.64
COL7A1-202ENST00000422991 OR10D4PQ8NGN7 298 aa11.08□□□□□ -0.64
COL7A1-202ENST00000422991 ORAOV1Q8WV07 137 aa11.08□□□□□ -0.64
COL7A1-202ENST00000422991 PGPEP1Q9NXJ5 209 aa11.08□□□□□ -0.64
COL7A1-202ENST00000422991 MRPL35Q9NZE8 188 aaKnown RBP11.08□□□□□ -0.64
COL7A1-202ENST00000422991 IGLV5-52A0A0A0MRZ9 124 aa11.07□□□□□ -0.64
COL7A1-202ENST00000422991 ZNF22P17026 224 aaPredicted RBP11.07□□□□□ -0.64
COL7A1-202ENST00000422991 CNBPP62633 177 aaKnown RBP11.06□□□□□ -0.64
COL7A1-202ENST00000422991 SPAG11BQ08648 103 aa11.06□□□□□ -0.64
COL7A1-202ENST00000422991 LINC00526Q96FQ7 95 aa11.06□□□□□ -0.64
COL7A1-202ENST00000422991 SMIM1B2RUZ4 78 aa11.05□□□□□ -0.64
COL7A1-202ENST00000422991 SYS1-DBNDD2H3BUS1 97 aa11.05□□□□□ -0.64
COL7A1-202ENST00000422991 ZNF561-AS1K7EIQ3 104 aa11.05□□□□□ -0.64
COL7A1-202ENST00000422991 SLPIP03973 132 aa11.05□□□□□ -0.64
COL7A1-202ENST00000422991 SNRPEP62304 92 aaKnown RBP11.05□□□□□ -0.64
COL7A1-202ENST00000422991 H3BRM9 83 aa11.04□□□□□ -0.64
COL7A1-202ENST00000422991 HIST1H2BLQ99880 126 aa11.04□□□□□ -0.64
COL7A1-202ENST00000422991 KIAA1109Q2LD37 5005 aa11.04□□□□□ -0.64
COL7A1-202ENST00000422991 HERC2O95714 4834 aa11.04□□□□□ -0.64
COL7A1-202ENST00000422991 C5orf52A6NGY3 159 aa11.03□□□□□ -0.64
COL7A1-202ENST00000422991 SPINK8P0C7L1 97 aa11.03□□□□□ -0.64
COL7A1-202ENST00000422991 C3orf79P0CE67 100 aa11.03□□□□□ -0.64
COL7A1-202ENST00000422991 S100A2P29034 98 aa11.03□□□□□ -0.64
COL7A1-202ENST00000422991 KIAA0087Q14695 138 aa11.03□□□□□ -0.64
COL7A1-202ENST00000422991 DYNC1H1Q14204 4646 aaKnown RBP11.03□□□□□ -0.64
COL7A1-202ENST00000422991 C16orf90A8MZG2 172 aa11.02□□□□□ -0.65
COL7A1-202ENST00000422991 PLNP26678 52 aa11.02□□□□□ -0.65
COL7A1-202ENST00000422991 TMEM170BQ5T4T1 132 aa11.02□□□□□ -0.65
COL7A1-202ENST00000422991 PET117Q6UWS5 81 aa11.02□□□□□ -0.65
COL7A1-202ENST00000422991 C2orf48Q96LS8 159 aa11.02□□□□□ -0.65
COL7A1-202ENST00000422991 PMCHL2Q9BQD1 86 aa11.02□□□□□ -0.65
COL7A1-202ENST00000422991 IGLV5-39A0A0G2JS06 123 aa11.01□□□□□ -0.65
COL7A1-202ENST00000422991 DPM2O94777 84 aa11.01□□□□□ -0.65
COL7A1-202ENST00000422991 KRTDAPP60985 99 aa11.01□□□□□ -0.65
COL7A1-202ENST00000422991 LINC01545Q5VT33 79 aa11.01□□□□□ -0.65
COL7A1-202ENST00000422991 TRAV16A0A0A6YYK6 109 aaPredicted RBP11□□□□□ -0.65
COL7A1-202ENST00000422991 GCSHP23434 173 aa11□□□□□ -0.65
COL7A1-202ENST00000422991 SYCNQ0VAF6 134 aa11□□□□□ -0.65
COL7A1-202ENST00000422991 Q8IZM0 81 aa11□□□□□ -0.65
COL7A1-202ENST00000422991 CARD19Q96LW7 228 aa11□□□□□ -0.65
COL7A1-202ENST00000422991 TMEM223A0PJW6 202 aa10.99□□□□□ -0.65
COL7A1-202ENST00000422991 F8WDY8 70 aa10.99□□□□□ -0.65
COL7A1-202ENST00000422991 IGKCP01834 107 aa10.99□□□□□ -0.65
COL7A1-202ENST00000422991 PRSS2P07478 247 aa10.99□□□□□ -0.65
COL7A1-202ENST00000422991 LINC01620Q4KN68 170 aa10.99□□□□□ -0.65
COL7A1-202ENST00000422991 C9orf163Q8N9P6 203 aa10.99□□□□□ -0.65
COL7A1-202ENST00000422991 CAMK2N2Q96S95 79 aa10.99□□□□□ -0.65
COL7A1-202ENST00000422991 TOMM7Q9P0U1 55 aa10.99□□□□□ -0.65
COL7A1-202ENST00000422991 TMA7Q9Y2S6 64 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms