RNA–Protein interactions for RNA: ENST00000422760.1

LSM8-203, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 1,920 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-203ENST00000422760 GAGE12IP0CL82 117 aa16.37■□□□□ 0.21
LSM8-203ENST00000422760 GTSF1LQ9H1H1 148 aa16.37■□□□□ 0.21
LSM8-203ENST00000422760 IGHV3-38A0A0C4DH36 116 aa16.37■□□□□ 0.21
LSM8-203ENST00000422760 Q1RN00 199 aa16.37■□□□□ 0.21
LSM8-203ENST00000422760 PPDPFQ9H3Y8 114 aa16.37■□□□□ 0.21
LSM8-203ENST00000422760 PRSS2P07478 247 aa16.36■□□□□ 0.21
LSM8-203ENST00000422760 COX6CP09669 75 aa16.36■□□□□ 0.21
LSM8-203ENST00000422760 RNASE13Q5GAN3 156 aaKnown RBP16.36■□□□□ 0.21
LSM8-203ENST00000422760 TRGV2A0A075B6R0 118 aa16.35■□□□□ 0.21
LSM8-203ENST00000422760 CYSRT1A8MQ03 144 aa16.35■□□□□ 0.21
LSM8-203ENST00000422760 SLC25A20O43772 301 aa16.35■□□□□ 0.21
LSM8-203ENST00000422760 CDKN2A-AS1Q9UH64 79 aa16.35■□□□□ 0.21
LSM8-203ENST00000422760 WIPF1O43516 503 aa16.35■□□□□ 0.21
LSM8-203ENST00000422760 TMEM262E9PQX1 116 aa16.34■□□□□ 0.21
LSM8-203ENST00000422760 TMEM101Q96IK0 257 aa16.33■□□□□ 0.21
LSM8-203ENST00000422760 ADAMTSL4-AS1Q5T5F5 129 aa16.32■□□□□ 0.2
LSM8-203ENST00000422760 X6R8D5 127 aa16.32■□□□□ 0.2
LSM8-203ENST00000422760 LINC00242Q5T6M2 205 aa16.31■□□□□ 0.2
LSM8-203ENST00000422760 TRBV6-4A0A1B0GX49 114 aa16.31■□□□□ 0.2
LSM8-203ENST00000422760 C9JAW5 83 aa16.3■□□□□ 0.2
LSM8-203ENST00000422760 LINC01620Q4KN68 170 aa16.3■□□□□ 0.2
LSM8-203ENST00000422760 ICOSQ9Y6W8 199 aa16.3■□□□□ 0.2
LSM8-203ENST00000422760 HERV-K104P63124 156 aa16.29■□□□□ 0.2
LSM8-203ENST00000422760 ANKRD29Q8N6D5 301 aa16.29■□□□□ 0.2
LSM8-203ENST00000422760 KIR2DL5BQ8NHK3 375 aa16.29■□□□□ 0.2
LSM8-203ENST00000422760 CARD19Q96LW7 228 aa16.29■□□□□ 0.2
LSM8-203ENST00000422760 FBN1P35555 2871 aaKnown RBP16.29■□□□□ 0.2
LSM8-203ENST00000422760 TRBV10-2A0A0K0K1G8 114 aa16.28■□□□□ 0.2
LSM8-203ENST00000422760 APOC4P55056 127 aa16.28■□□□□ 0.2
LSM8-203ENST00000422760 TMEM243Q9BU79 118 aa16.28■□□□□ 0.2
LSM8-203ENST00000422760 CDC42SE2Q9NRR3 84 aa16.28■□□□□ 0.2
LSM8-203ENST00000422760 H7C2G1 150 aa16.27■□□□□ 0.2
LSM8-203ENST00000422760 TRIAP1O43715 76 aa16.27■□□□□ 0.2
LSM8-203ENST00000422760 DEFB135Q30KP9 77 aa16.27■□□□□ 0.2
LSM8-203ENST00000422760 NBEAL2Q6ZNJ1 2754 aa16.27■□□□□ 0.19
LSM8-203ENST00000422760 SMIM9A6NGZ8 99 aa16.27■□□□□ 0.19
LSM8-203ENST00000422760 GAGE12JA6NER3 117 aa16.26■□□□□ 0.19
LSM8-203ENST00000422760 UBE2L6O14933 153 aa16.26■□□□□ 0.19
LSM8-203ENST00000422760 GAGE4Q13068 117 aa16.26■□□□□ 0.19
LSM8-203ENST00000422760 GAGE5Q13069 117 aa16.26■□□□□ 0.19
LSM8-203ENST00000422760 NTM-AS1Q6ZSK4 140 aa16.26■□□□□ 0.19
LSM8-203ENST00000422760 CDIP1Q9H305 208 aa16.26■□□□□ 0.19
LSM8-203ENST00000422760 TRGV4A0A0C4DH28 118 aa16.25■□□□□ 0.19
LSM8-203ENST00000422760 RPL13AP40429 203 aaKnown RBP16.25■□□□□ 0.19
LSM8-203ENST00000422760 STAB1Q9NY15 2570 aa16.25■□□□□ 0.19
LSM8-203ENST00000422760 SMIM1B2RUZ4 78 aa16.25■□□□□ 0.19
LSM8-203ENST00000422760 H3BT86 120 aa16.25■□□□□ 0.19
LSM8-203ENST00000422760 LINC00612Q8N6U2 182 aa16.25■□□□□ 0.19
LSM8-203ENST00000422760 C3orf56Q8N813 242 aa16.25■□□□□ 0.19
LSM8-203ENST00000422760 DEFB130BP0DP73 79 aa16.24■□□□□ 0.19
LSM8-203ENST00000422760 DEFB130AP0DP74 79 aa16.24■□□□□ 0.19
LSM8-203ENST00000422760 COX6A2Q02221 97 aa16.24■□□□□ 0.19
LSM8-203ENST00000422760 LINC00694P0DN24 101 aa16.23■□□□□ 0.19
LSM8-203ENST00000422760 FHL2Q14192 279 aa16.23■□□□□ 0.19
LSM8-203ENST00000422760 Q9H8V8 135 aa16.23■□□□□ 0.19
LSM8-203ENST00000422760 PRIMA1Q86XR5 153 aa16.23■□□□□ 0.19
LSM8-203ENST00000422760 LOC100131303A0A0U1RQF7 123 aa16.22■□□□□ 0.19
LSM8-203ENST00000422760 A8MZ25 164 aa16.22■□□□□ 0.19
LSM8-203ENST00000422760 IGHV4-30-4P0DP06 118 aa16.21■□□□□ 0.19
LSM8-203ENST00000422760 OXLD1Q5BKU9 147 aa16.21■□□□□ 0.19
LSM8-203ENST00000422760 LINC00308Q8TCZ7 52 aa16.21■□□□□ 0.19
LSM8-203ENST00000422760 MAST4O15021 2626 aa16.21■□□□□ 0.19
LSM8-203ENST00000422760 ZNF625Q96I27 306 aaPredicted RBP16.21■□□□□ 0.19
LSM8-203ENST00000422760 F5H768 121 aa16.2■□□□□ 0.18
LSM8-203ENST00000422760 SHISA2Q6UWI4 295 aa16.2■□□□□ 0.18
LSM8-203ENST00000422760 TRAV13-1A0A0B4J241 112 aa16.19■□□□□ 0.18
LSM8-203ENST00000422760 LST1O00453 97 aa16.19■□□□□ 0.18
LSM8-203ENST00000422760 A0A1B0GV72 72 aa16.18■□□□□ 0.18
LSM8-203ENST00000422760 FAM222AQ5U5X8 452 aa16.17■□□□□ 0.18
LSM8-203ENST00000422760 IGHV4-28A0A0C4DH34 117 aa16.15■□□□□ 0.18
LSM8-203ENST00000422760 LYRM9A8MSI8 78 aa16.15■□□□□ 0.18
LSM8-203ENST00000422760 DEFB4AO15263 64 aa16.15■□□□□ 0.18
LSM8-203ENST00000422760 KRTAP10-11P60412 298 aa16.14■□□□□ 0.17
LSM8-203ENST00000422760 C2orf82Q6UX34 121 aa16.14■□□□□ 0.17
LSM8-203ENST00000422760 NTN5Q8WTR8 489 aaPredicted RBP16.14■□□□□ 0.17
LSM8-203ENST00000422760 UBE2WQ96B02 151 aa16.14■□□□□ 0.17
LSM8-203ENST00000422760 CMYA5Q8N3K9 4069 aa16.14■□□□□ 0.17
LSM8-203ENST00000422760 MEIG1Q5JSS6 88 aa16.13■□□□□ 0.17
LSM8-203ENST00000422760 Q8NAQ8 132 aa16.13■□□□□ 0.17
LSM8-203ENST00000422760 PKD1L1Q8TDX9 2849 aa16.12■□□□□ 0.17
LSM8-203ENST00000422760 TRBV6-8A0A0A6YYG3 113 aa16.12■□□□□ 0.17
LSM8-203ENST00000422760 NPC2P61916 151 aa16.12■□□□□ 0.17
LSM8-203ENST00000422760 MIFP14174 115 aa16.11■□□□□ 0.17
LSM8-203ENST00000422760 EGFEM1PQ0D2K5 195 aa16.11■□□□□ 0.17
LSM8-203ENST00000422760 COX7A2LO14548 114 aa16.1■□□□□ 0.17
LSM8-203ENST00000422760 XGP55808 180 aa16.1■□□□□ 0.17
LSM8-203ENST00000422760 DEFB121Q5J5C9 76 aa16.09■□□□□ 0.17
LSM8-203ENST00000422760 DAND5Q8N907 189 aa16.09■□□□□ 0.17
LSM8-203ENST00000422760 COX7B2Q8TF08 81 aa16.08■□□□□ 0.16
LSM8-203ENST00000422760 FAM240AA0A1B0GVK7 77 aa16.07■□□□□ 0.16
LSM8-203ENST00000422760 PRO0255Q9UI72 69 aa16.07■□□□□ 0.16
LSM8-203ENST00000422760 CELA1Q9UNI1 258 aa16.07■□□□□ 0.16
LSM8-203ENST00000422760 COL6A5A8TX70 2615 aa16.07■□□□□ 0.16
LSM8-203ENST00000422760 TRAV13-2A0A0B4J235 113 aa16.07■□□□□ 0.16
LSM8-203ENST00000422760 MT-ATP8P03928 68 aa16.07■□□□□ 0.16
LSM8-203ENST00000422760 GYPEP15421 78 aa16.07■□□□□ 0.16
LSM8-203ENST00000422760 MRPL23Q16540 153 aaKnown RBP16.07■□□□□ 0.16
LSM8-203ENST00000422760 TRAV8-4A0A0B4J246 113 aa16.06■□□□□ 0.16
LSM8-203ENST00000422760 DAD1P61803 113 aa16.06■□□□□ 0.16
LSM8-203ENST00000422760 TRACP01848 142 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms