RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 RNASE3P12724 160 aaKnown RBP12.17□□□□□ -0.46
SYNGAP1-202ENST00000418600 LINC01556Q5JQF7 62 aa12.17□□□□□ -0.46
SYNGAP1-202ENST00000418600 DOCK11Q5JSL3 2073 aa12.17□□□□□ -0.46
SYNGAP1-202ENST00000418600 CELA1Q9UNI1 258 aa12.17□□□□□ -0.46
SYNGAP1-202ENST00000418600 WFDC2Q14508 124 aa12.15□□□□□ -0.46
SYNGAP1-202ENST00000418600 C3orf22Q8N5N4 141 aa12.15□□□□□ -0.46
SYNGAP1-202ENST00000418600 M0R378 163 aa12.15□□□□□ -0.46
SYNGAP1-202ENST00000418600 WFDC10BQ8IUB3 73 aa12.15□□□□□ -0.46
SYNGAP1-202ENST00000418600 RNASE8Q8TDE3 154 aaKnown RBP12.15□□□□□ -0.46
SYNGAP1-202ENST00000418600 NACAE9PAV3 2078 aa12.15□□□□□ -0.46
SYNGAP1-202ENST00000418600 TRAV23DV6A0A075B6W5 121 aa12.15□□□□□ -0.47
SYNGAP1-202ENST00000418600 SPTSSBQ8NFR3 76 aa12.15□□□□□ -0.47
SYNGAP1-202ENST00000418600 TCL1BO95988 128 aa12.14□□□□□ -0.47
SYNGAP1-202ENST00000418600 XGP55808 180 aa12.14□□□□□ -0.47
SYNGAP1-202ENST00000418600 TTTY13Q9BZ97 58 aa12.14□□□□□ -0.47
SYNGAP1-202ENST00000418600 CCDC168Q8NDH2 2452 aa12.14□□□□□ -0.47
SYNGAP1-202ENST00000418600 IGLV4-3A0A075B6K6 122 aa12.13□□□□□ -0.47
SYNGAP1-202ENST00000418600 TMEM223A0PJW6 202 aa12.13□□□□□ -0.47
SYNGAP1-202ENST00000418600 NUPR1O60356 82 aa12.13□□□□□ -0.47
SYNGAP1-202ENST00000418600 V9GYY9 64 aa12.13□□□□□ -0.47
SYNGAP1-202ENST00000418600 A0A1B0GXF2 115 aa12.13□□□□□ -0.47
SYNGAP1-202ENST00000418600 PLA2G1BP04054 148 aaKnown RBP12.13□□□□□ -0.47
SYNGAP1-202ENST00000418600 CDKN2A-AS1Q9UH64 79 aa12.13□□□□□ -0.47
SYNGAP1-202ENST00000418600 NAV3Q8IVL0 2385 aa12.12□□□□□ -0.47
SYNGAP1-202ENST00000418600 SPINK6Q6UWN8 80 aa12.12□□□□□ -0.47
SYNGAP1-202ENST00000418600 SERP1Q9Y6X1 66 aa12.12□□□□□ -0.47
SYNGAP1-202ENST00000418600 LINC00308Q8TCZ7 52 aa12.11□□□□□ -0.47
SYNGAP1-202ENST00000418600 PYGO1Q9Y3Y4 419 aa12.11□□□□□ -0.47
SYNGAP1-202ENST00000418600 REG3GQ6UW15 175 aa12.1□□□□□ -0.47
SYNGAP1-202ENST00000418600 ZNF22P17026 224 aaPredicted RBP12.1□□□□□ -0.47
SYNGAP1-202ENST00000418600 TSHBP01222 138 aa12.1□□□□□ -0.47
SYNGAP1-202ENST00000418600 TRBV30A0A0K0K1B3 111 aa12.09□□□□□ -0.47
SYNGAP1-202ENST00000418600 NOTCH3Q9UM47 2321 aa12.09□□□□□ -0.47
SYNGAP1-202ENST00000418600 MRPL55Q7Z7F7 128 aaKnown RBP12.09□□□□□ -0.47
SYNGAP1-202ENST00000418600 TEX49A0A1B0GTD5 131 aa12.08□□□□□ -0.47
SYNGAP1-202ENST00000418600 TIMM17BO60830 172 aa12.08□□□□□ -0.47
SYNGAP1-202ENST00000418600 CCKP06307 115 aa12.08□□□□□ -0.47
SYNGAP1-202ENST00000418600 CRIP1P50238 77 aa12.08□□□□□ -0.47
SYNGAP1-202ENST00000418600 TRBV6-5A0A0K0K1A5 114 aa12.08□□□□□ -0.48
SYNGAP1-202ENST00000418600 LINC00337Q8N6G1 96 aa12.08□□□□□ -0.48
SYNGAP1-202ENST00000418600 PLCE1Q9P212 2302 aa12.08□□□□□ -0.48
SYNGAP1-202ENST00000418600 SONP18583 2426 aaKnown RBP12.08□□□□□ -0.48
SYNGAP1-202ENST00000418600 CIRBP-AS1Q8TBR5 109 aa12.08□□□□□ -0.48
SYNGAP1-202ENST00000418600 ATP5EP56381 51 aaPredicted RBP12.08□□□□□ -0.48
SYNGAP1-202ENST00000418600 COX17Q14061 63 aa12.08□□□□□ -0.48
SYNGAP1-202ENST00000418600 PIEZO2Q9H5I5 2752 aa12.07□□□□□ -0.48
SYNGAP1-202ENST00000418600 K7EIL1 84 aa12.07□□□□□ -0.48
SYNGAP1-202ENST00000418600 NBDYA0A0U1RRE5 68 aa12.06□□□□□ -0.48
SYNGAP1-202ENST00000418600 CYSRT1A8MQ03 144 aa12.06□□□□□ -0.48
SYNGAP1-202ENST00000418600 MLST8Q9BVC4 326 aa12.06□□□□□ -0.48
SYNGAP1-202ENST00000418600 C6orf99Q4VX62 202 aa12.06□□□□□ -0.48
SYNGAP1-202ENST00000418600 F8WDY8 70 aa12.05□□□□□ -0.48
SYNGAP1-202ENST00000418600 TANC2Q9HCD6 1990 aa12.05□□□□□ -0.48
SYNGAP1-202ENST00000418600 Q8N9L7 120 aa12.05□□□□□ -0.48
SYNGAP1-202ENST00000418600 TRBV27A0A0K0K1C4 114 aa12.05□□□□□ -0.48
SYNGAP1-202ENST00000418600 NDUFC1O43677 76 aa12.05□□□□□ -0.48
SYNGAP1-202ENST00000418600 BRK1Q8WUW1 75 aa12.04□□□□□ -0.48
SYNGAP1-202ENST00000418600 C11orf21Q9P2W6 132 aa12.04□□□□□ -0.48
SYNGAP1-202ENST00000418600 FAM236DA0A1B0GTK5 79 aa12.04□□□□□ -0.48
SYNGAP1-202ENST00000418600 FAM236CP0DP71 79 aa12.04□□□□□ -0.48
SYNGAP1-202ENST00000418600 MRPS36P82909 103 aaKnown RBP12.04□□□□□ -0.48
SYNGAP1-202ENST00000418600 EGFEM1PQ0D2K5 195 aa12.03□□□□□ -0.48
SYNGAP1-202ENST00000418600 UQCRQO14949 82 aa12.03□□□□□ -0.48
SYNGAP1-202ENST00000418600 COX6A2Q02221 97 aa12.03□□□□□ -0.48
SYNGAP1-202ENST00000418600 ENHOQ6UWT2 76 aa12.03□□□□□ -0.48
SYNGAP1-202ENST00000418600 C20orf197Q8N268 126 aa12.02□□□□□ -0.49
SYNGAP1-202ENST00000418600 Q8IZM0 81 aa12.02□□□□□ -0.49
SYNGAP1-202ENST00000418600 KRTAP10-11P60412 298 aa12.01□□□□□ -0.49
SYNGAP1-202ENST00000418600 ARHGAP32A7KAX9 2087 aa12.01□□□□□ -0.49
SYNGAP1-202ENST00000418600 CDC42SE2Q9NRR3 84 aa12.01□□□□□ -0.49
SYNGAP1-202ENST00000418600 FAM240AA0A1B0GVK7 77 aa12.01□□□□□ -0.49
SYNGAP1-202ENST00000418600 NDUFC2-KCTD14E9PQ53 114 aa12.01□□□□□ -0.49
SYNGAP1-202ENST00000418600 RTL8CO15255 209 aa12.01□□□□□ -0.49
SYNGAP1-202ENST00000418600 C10orf25Q5T742 122 aa12.01□□□□□ -0.49
SYNGAP1-202ENST00000418600 EXPH5Q8NEV8 1989 aa12□□□□□ -0.49
SYNGAP1-202ENST00000418600 SDIM1Q6ZPB5 146 aa12□□□□□ -0.49
SYNGAP1-202ENST00000418600 SLPIP03973 132 aa12□□□□□ -0.49
SYNGAP1-202ENST00000418600 ESRGQ1W209 222 aa11.99□□□□□ -0.49
SYNGAP1-202ENST00000418600 SCXQ7RTU7 201 aa11.99□□□□□ -0.49
SYNGAP1-202ENST00000418600 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.99□□□□□ -0.49
SYNGAP1-202ENST00000418600 ZNF462Q96JM2 2506 aa11.99□□□□□ -0.49
SYNGAP1-202ENST00000418600 PTH2Q96A98 100 aa11.99□□□□□ -0.49
SYNGAP1-202ENST00000418600 RNF185Q96GF1 192 aa11.99□□□□□ -0.49
SYNGAP1-202ENST00000418600 CDPF1Q6NVV7 123 aa11.99□□□□□ -0.49
SYNGAP1-202ENST00000418600 LINC00315P59091 139 aa11.98□□□□□ -0.49
SYNGAP1-202ENST00000418600 FAM19A3Q7Z5A8 133 aa11.98□□□□□ -0.49
SYNGAP1-202ENST00000418600 ZNF73O43830 326 aaPredicted RBP11.96□□□□□ -0.49
SYNGAP1-202ENST00000418600 MRPS12O15235 138 aaKnown RBP11.96□□□□□ -0.49
SYNGAP1-202ENST00000418600 Q6ZQY7 126 aa11.96□□□□□ -0.49
SYNGAP1-202ENST00000418600 H3BNG1 76 aa11.96□□□□□ -0.49
SYNGAP1-202ENST00000418600 WNK1Q9H4A3 2382 aa11.95□□□□□ -0.5
SYNGAP1-202ENST00000418600 UNQ6190/PRO20217Q6UXQ8 127 aa11.95□□□□□ -0.5
SYNGAP1-202ENST00000418600 TRIAP1O43715 76 aa11.95□□□□□ -0.5
SYNGAP1-202ENST00000418600 C2orf48Q96LS8 159 aa11.95□□□□□ -0.5
SYNGAP1-202ENST00000418600 TNCP24821 2201 aa11.94□□□□□ -0.5
SYNGAP1-202ENST00000418600 WFDC13Q8IUB5 93 aa11.94□□□□□ -0.5
SYNGAP1-202ENST00000418600 NDUFV3P56181 108 aaKnown RBP11.94□□□□□ -0.5
SYNGAP1-202ENST00000418600 IGLV4-60A0A075B6I1 120 aa11.93□□□□□ -0.5
SYNGAP1-202ENST00000418600 MPLKIPQ8TAP9 179 aa11.93□□□□□ -0.5
SYNGAP1-202ENST00000418600 TP73-AS1Q9UF72 201 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms