RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 LPAP08519 4548 aa9.03□□□□□ -0.96
RPS28-201ENST00000417088 hCG_2014768A0A024R1R8 64 aa9.02□□□□□ -0.97
RPS28-201ENST00000417088 TNFRSF6BO95407 300 aa9.02□□□□□ -0.97
RPS28-201ENST00000417088 C10orf25Q5T742 122 aa9.02□□□□□ -0.97
RPS28-201ENST00000417088 F8WDY8 70 aa9.01□□□□□ -0.97
RPS28-201ENST00000417088 TCAPO15273 167 aa9.01□□□□□ -0.97
RPS28-201ENST00000417088 IGLV7-43P04211 117 aa9.01□□□□□ -0.97
RPS28-201ENST00000417088 ADIRFQ15847 76 aa9.01□□□□□ -0.97
RPS28-201ENST00000417088 KRTAP11-1Q8IUC1 163 aa9.01□□□□□ -0.97
RPS28-201ENST00000417088 IMMP2LQ96T52 175 aa9.01□□□□□ -0.97
RPS28-201ENST00000417088 SMIM2Q9BVW6 85 aa9.01□□□□□ -0.97
RPS28-201ENST00000417088 SPANXA1Q9NS26 97 aa9.01□□□□□ -0.97
RPS28-201ENST00000417088 A0A1B0GW15 77 aa9□□□□□ -0.97
RPS28-201ENST00000417088 FAM168BA1KXE4 195 aa9□□□□□ -0.97
RPS28-201ENST00000417088 C9JQL5 133 aa9□□□□□ -0.97
RPS28-201ENST00000417088 NDUFA1O15239 70 aa9□□□□□ -0.97
RPS28-201ENST00000417088 MRPS36P82909 103 aaKnown RBP9□□□□□ -0.97
RPS28-201ENST00000417088 UNQ6190/PRO20217Q6UXQ8 127 aa9□□□□□ -0.97
RPS28-201ENST00000417088 DIRC1Q969H9 104 aa9□□□□□ -0.97
RPS28-201ENST00000417088 A0A087WZ39 114 aa8.99□□□□□ -0.97
RPS28-201ENST00000417088 D6R8Y8 96 aa8.99□□□□□ -0.97
RPS28-201ENST00000417088 TLX1NBP0CAT3 122 aa8.99□□□□□ -0.97
RPS28-201ENST00000417088 PRR26Q8N8Z3 221 aa8.99□□□□□ -0.97
RPS28-201ENST00000417088 C6orf48Q9UBA6 75 aa8.99□□□□□ -0.97
RPS28-201ENST00000417088 NAT8Q9UHE5 227 aa8.99□□□□□ -0.97
RPS28-201ENST00000417088 IFITM10A6NMD0 228 aa8.98□□□□□ -0.97
RPS28-201ENST00000417088 NPYP01303 97 aa8.98□□□□□ -0.97
RPS28-201ENST00000417088 HBBP68871 147 aa8.98□□□□□ -0.97
RPS28-201ENST00000417088 H0Y9J4 135 aa8.97□□□□□ -0.97
RPS28-201ENST00000417088 MRPL54Q6P161 138 aaKnown RBP8.97□□□□□ -0.97
RPS28-201ENST00000417088 FAM19A5Q7Z5A7 132 aaPredicted RBP8.97□□□□□ -0.97
RPS28-201ENST00000417088 KRTAP7-1Q8IUC3 87 aa8.97□□□□□ -0.97
RPS28-201ENST00000417088 A0A1B0GXF2 115 aa8.96□□□□□ -0.98
RPS28-201ENST00000417088 F8W036 122 aa8.96□□□□□ -0.98
RPS28-201ENST00000417088 SRSF3P84103 164 aaKnown RBP8.96□□□□□ -0.98
RPS28-201ENST00000417088 KIAA0087Q14695 138 aa8.96□□□□□ -0.98
RPS28-201ENST00000417088 GAGE2EQ4V326 116 aa8.96□□□□□ -0.98
RPS28-201ENST00000417088 SMDT1Q9H4I9 107 aa8.96□□□□□ -0.98
RPS28-201ENST00000417088 GAGE2DQ9UEU5 116 aa8.96□□□□□ -0.98
RPS28-201ENST00000417088 S100A8P05109 93 aa8.95□□□□□ -0.98
RPS28-201ENST00000417088 TGIF2-C20orf24A0A0A6YYL0 155 aa8.94□□□□□ -0.98
RPS28-201ENST00000417088 PPBPP02775 128 aa8.94□□□□□ -0.98
RPS28-201ENST00000417088 LINC00242Q5T6M2 205 aa8.94□□□□□ -0.98
RPS28-201ENST00000417088 KRTAP1-4P0C5Y4 121 aa8.93□□□□□ -0.98
RPS28-201ENST00000417088 IFI27P40305 119 aaPredicted RBP8.93□□□□□ -0.98
RPS28-201ENST00000417088 PEA15Q15121 130 aa8.93□□□□□ -0.98
RPS28-201ENST00000417088 PYGO1Q9Y3Y4 419 aa8.93□□□□□ -0.98
RPS28-201ENST00000417088 IGLV1-50A0A075B6I6 118 aa8.92□□□□□ -0.98
RPS28-201ENST00000417088 IGLV4-3A0A075B6K6 122 aa8.92□□□□□ -0.98
RPS28-201ENST00000417088 M0QXV9 152 aa8.92□□□□□ -0.98
RPS28-201ENST00000417088 RAB5AP20339 215 aa8.92□□□□□ -0.98
RPS28-201ENST00000417088 C2orf82Q6UX34 121 aa8.92□□□□□ -0.98
RPS28-201ENST00000417088 TMEM136Q6ZRR5 245 aa8.92□□□□□ -0.98
RPS28-201ENST00000417088 ORMDL3Q8N138 153 aa8.92□□□□□ -0.98
RPS28-201ENST00000417088 TRBV30A0A0K0K1B3 111 aa8.91□□□□□ -0.98
RPS28-201ENST00000417088 UBE2BP63146 152 aa8.91□□□□□ -0.98
RPS28-201ENST00000417088 TMEM141Q96I45 108 aa8.91□□□□□ -0.98
RPS28-201ENST00000417088 PRELID3AQ96N28 172 aa8.91□□□□□ -0.98
RPS28-201ENST00000417088 NDUFC2-KCTD14E9PQ53 114 aa8.9□□□□□ -0.98
RPS28-201ENST00000417088 C9orf129Q5T035 196 aaKnown RBP8.9□□□□□ -0.98
RPS28-201ENST00000417088 PRSS47A8MTI9 375 aa8.89□□□□□ -0.99
RPS28-201ENST00000417088 UBE2D1P51668 147 aa8.89□□□□□ -0.99
RPS28-201ENST00000417088 ATP5L2Q7Z4Y8 100 aa8.89□□□□□ -0.99
RPS28-201ENST00000417088 TEX43Q6ZNM6 134 aa8.88□□□□□ -0.99
RPS28-201ENST00000417088 LINC01561Q8N1V8 128 aa8.88□□□□□ -0.99
RPS28-201ENST00000417088 PACRGQ96M98 296 aaPredicted RBP8.88□□□□□ -0.99
RPS28-201ENST00000417088 LOC389332A0A1B0GUA5 103 aa8.87□□□□□ -0.99
RPS28-201ENST00000417088 ZC2HC1BQ5TFG8 222 aa8.87□□□□□ -0.99
RPS28-201ENST00000417088 LINC00173Q6ZV60 143 aa8.86□□□□□ -0.99
RPS28-201ENST00000417088 C2orf66Q6UXQ4 117 aa8.85□□□□□ -0.99
RPS28-201ENST00000417088 AMELXQ99217 191 aa8.85□□□□□ -0.99
RPS28-201ENST00000417088 C2orf88Q9BSF0 95 aa8.85□□□□□ -0.99
RPS28-201ENST00000417088 CYSLTR1Q9Y271 337 aa8.85□□□□□ -0.99
RPS28-201ENST00000417088 LAMTOR2Q9Y2Q5 125 aa8.85□□□□□ -0.99
RPS28-201ENST00000417088 A0A1B0GVG6 124 aa8.84□□□□□ -0.99
RPS28-201ENST00000417088 PRSS2P07478 247 aa8.84□□□□□ -0.99
RPS28-201ENST00000417088 RPL13AP40429 203 aaKnown RBP8.84□□□□□ -0.99
RPS28-201ENST00000417088 Q6ZN92 141 aa8.84□□□□□ -0.99
RPS28-201ENST00000417088 Q8N8P6 123 aa8.84□□□□□ -0.99
RPS28-201ENST00000417088 VCX2Q9H322 139 aa8.84□□□□□ -0.99
RPS28-201ENST00000417088 MAP1LC3AQ9H492 121 aa8.84□□□□□ -0.99
RPS28-201ENST00000417088 TOMM7Q9P0U1 55 aa8.84□□□□□ -0.99
RPS28-201ENST00000417088 ZNF861PO60384 105 aa8.83□□□□□ -1
RPS28-201ENST00000417088 PRR4Q16378 134 aa8.83□□□□□ -1
RPS28-201ENST00000417088 LINC00469Q8N7U9 141 aa8.83□□□□□ -1
RPS28-201ENST00000417088 CARHSP1Q9Y2V2 147 aaKnown RBP8.83□□□□□ -1
RPS28-201ENST00000417088 MUC2Q02817 5179 aa8.83□□□□□ -1
RPS28-201ENST00000417088 IGIPA6NJ69 53 aa8.82□□□□□ -1
RPS28-201ENST00000417088 CKS1BP61024 79 aa8.82□□□□□ -1
RPS28-201ENST00000417088 C6orf226Q5I0X4 101 aa8.82□□□□□ -1
RPS28-201ENST00000417088 FAM19A3Q7Z5A8 133 aa8.82□□□□□ -1
RPS28-201ENST00000417088 Q8IZM0 81 aa8.82□□□□□ -1
RPS28-201ENST00000417088 C22orf24Q9Y442 160 aa8.82□□□□□ -1
RPS28-201ENST00000417088 NPSP0C0P6 89 aa8.81□□□□□ -1
RPS28-201ENST00000417088 ALKBH7Q9BT30 221 aaPredicted RBP8.81□□□□□ -1
RPS28-201ENST00000417088 XAGE1AQ9HD64 81 aa8.81□□□□□ -1
RPS28-201ENST00000417088 NUPR1O60356 82 aa8.8□□□□□ -1
RPS28-201ENST00000417088 ORMDL2Q53FV1 153 aa8.8□□□□□ -1
RPS28-201ENST00000417088 LBHQ53QV2 105 aaPredicted RBP8.8□□□□□ -1
RPS28-201ENST00000417088 CTDSP1Q9GZU7 261 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms