RNA–Protein interactions for RNA: ENST00000416893.2

ATG4AP1-201, Transcript of autophagy related 4A cysteine peptidase pseudogene 1, humanhuman

BASIC

Gene ATG4AP1, Length 538 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AP1-201ENST00000416893 SHANK2-AS3Q9BTD1 123 aa3.51□□□□□ -1.85
ATG4AP1-201ENST00000416893 GFRA4Q9GZZ7 299 aa3.51□□□□□ -1.85
ATG4AP1-201ENST00000416893 SLC25A22Q9H936 323 aa3.51□□□□□ -1.85
ATG4AP1-201ENST00000416893 SERP1Q9Y6X1 66 aa3.51□□□□□ -1.85
ATG4AP1-201ENST00000416893 FRAS1Q86XX4 4008 aa3.5□□□□□ -1.85
ATG4AP1-201ENST00000416893 TRAV8-1A0A0A6YYK1 113 aa3.5□□□□□ -1.85
ATG4AP1-201ENST00000416893 RBMY1BA6NDE4 496 aaKnown RBP3.5□□□□□ -1.85
ATG4AP1-201ENST00000416893 RBMY1EA6NEQ0 496 aaKnown RBP3.5□□□□□ -1.85
ATG4AP1-201ENST00000416893 SLC25A20O43772 301 aa3.5□□□□□ -1.85
ATG4AP1-201ENST00000416893 RBMY1DP0C7P1 496 aaKnown RBP3.5□□□□□ -1.85
ATG4AP1-201ENST00000416893 LYZP61626 148 aa3.5□□□□□ -1.85
ATG4AP1-201ENST00000416893 HIST1H4AP62805 103 aaKnown RBP3.5□□□□□ -1.85
ATG4AP1-201ENST00000416893 HBBP68871 147 aa3.5□□□□□ -1.85
ATG4AP1-201ENST00000416893 C2orf48Q96LS8 159 aa3.5□□□□□ -1.85
ATG4AP1-201ENST00000416893 TMEM167BQ9NRX6 74 aa3.5□□□□□ -1.85
ATG4AP1-201ENST00000416893 EPDR1Q9UM22 224 aa3.5□□□□□ -1.85
ATG4AP1-201ENST00000416893 U3KQK5 164 aa3.5□□□□□ -1.85
ATG4AP1-201ENST00000416893 HYDINQ4G0P3 5121 aa3.49□□□□□ -1.85
ATG4AP1-201ENST00000416893 TRBV7-3A0A075B6L6 115 aa3.49□□□□□ -1.85
ATG4AP1-201ENST00000416893 K7ERJ3 54 aa3.49□□□□□ -1.85
ATG4AP1-201ENST00000416893 PSMB2P49721 201 aa3.49□□□□□ -1.85
ATG4AP1-201ENST00000416893 UBE2D1P51668 147 aa3.49□□□□□ -1.85
ATG4AP1-201ENST00000416893 NPC2P61916 151 aa3.49□□□□□ -1.85
ATG4AP1-201ENST00000416893 UBE2L3P68036 154 aaKnown RBP3.49□□□□□ -1.85
ATG4AP1-201ENST00000416893 CENPWQ5EE01 88 aa3.49□□□□□ -1.85
ATG4AP1-201ENST00000416893 LINC00322Q6ZN03 302 aaPredicted RBP3.49□□□□□ -1.85
ATG4AP1-201ENST00000416893 Q6ZRU5 148 aa3.49□□□□□ -1.85
ATG4AP1-201ENST00000416893 LINC00173Q6ZV60 143 aa3.49□□□□□ -1.85
ATG4AP1-201ENST00000416893 C5orf38Q86SI9 138 aa3.49□□□□□ -1.85
ATG4AP1-201ENST00000416893 GATAD1Q8WUU5 269 aa3.49□□□□□ -1.85
ATG4AP1-201ENST00000416893 FAM19A4Q96LR4 140 aa3.49□□□□□ -1.85
ATG4AP1-201ENST00000416893 TM2D3Q9BRN9 247 aa3.49□□□□□ -1.85
ATG4AP1-201ENST00000416893 NPCDR1Q9BY65 106 aa3.49□□□□□ -1.85
ATG4AP1-201ENST00000416893 RETNQ9HD89 108 aa3.49□□□□□ -1.85
ATG4AP1-201ENST00000416893 NACAE9PAV3 2078 aa3.48□□□□□ -1.85
ATG4AP1-201ENST00000416893 A0A0U1RQV1 116 aa3.48□□□□□ -1.85
ATG4AP1-201ENST00000416893 UBE2L5PA0A1B0GUS4 154 aa3.48□□□□□ -1.85
ATG4AP1-201ENST00000416893 H3BT86 120 aa3.48□□□□□ -1.85
ATG4AP1-201ENST00000416893 K7EQG2 157 aa3.48□□□□□ -1.85
ATG4AP1-201ENST00000416893 GATA1P15976 413 aaPredicted RBP3.48□□□□□ -1.85
ATG4AP1-201ENST00000416893 KRTAP5-9P26371 169 aa3.48□□□□□ -1.85
ATG4AP1-201ENST00000416893 DEFB131AP59861 70 aa3.48□□□□□ -1.85
ATG4AP1-201ENST00000416893 SRSF9Q13242 221 aaKnown RBP eCLIP3.48□□□□□ -1.85
ATG4AP1-201ENST00000416893 SDIM1Q6ZPB5 146 aa3.48□□□□□ -1.85
ATG4AP1-201ENST00000416893 PCP2Q8IVA1 136 aa3.48□□□□□ -1.85
ATG4AP1-201ENST00000416893 SERP2Q8N6R1 65 aa3.48□□□□□ -1.85
ATG4AP1-201ENST00000416893 DCANP1Q8TF63 244 aa3.48□□□□□ -1.85
ATG4AP1-201ENST00000416893 HIST1H4GQ99525 98 aa3.48□□□□□ -1.85
ATG4AP1-201ENST00000416893 DPH3P1Q9H4G8 78 aa3.48□□□□□ -1.85
ATG4AP1-201ENST00000416893 WDR83OSQ9Y284 106 aa3.48□□□□□ -1.85
ATG4AP1-201ENST00000416893 PKHD1P08F94 4074 aa3.47□□□□□ -1.85
ATG4AP1-201ENST00000416893 IGLV9-49A0A0B4J1Y8 123 aa3.47□□□□□ -1.85
ATG4AP1-201ENST00000416893 TRAV26-2A0A0B4J265 109 aa3.47□□□□□ -1.85
ATG4AP1-201ENST00000416893 TRBV10-2A0A0K0K1G8 114 aa3.47□□□□□ -1.85
ATG4AP1-201ENST00000416893 C19orf71A6NCJ1 209 aa3.47□□□□□ -1.85
ATG4AP1-201ENST00000416893 H3BMM0 161 aa3.47□□□□□ -1.85
ATG4AP1-201ENST00000416893 H3BRN7 92 aa3.47□□□□□ -1.85
ATG4AP1-201ENST00000416893 TCL1BO95988 128 aa3.47□□□□□ -1.85
ATG4AP1-201ENST00000416893 OXTP01178 125 aa3.47□□□□□ -1.85
ATG4AP1-201ENST00000416893 IGLV2-8P01709 118 aa3.47□□□□□ -1.85
ATG4AP1-201ENST00000416893 HBDP02042 147 aa3.47□□□□□ -1.85
ATG4AP1-201ENST00000416893 GDF5OSQ5U4N7 250 aa3.47□□□□□ -1.85
ATG4AP1-201ENST00000416893 PRR15Q8IV56 129 aa3.47□□□□□ -1.85
ATG4AP1-201ENST00000416893 UBE2WQ96B02 151 aa3.47□□□□□ -1.85
ATG4AP1-201ENST00000416893 IGF2BP2-AS1Q96M15 143 aa3.47□□□□□ -1.85
ATG4AP1-201ENST00000416893 LITAFQ99732 161 aa3.47□□□□□ -1.85
ATG4AP1-201ENST00000416893 NXT2Q9NPJ8 142 aaKnown RBP3.47□□□□□ -1.85
ATG4AP1-201ENST00000416893 ZNF492Q9P255 531 aa3.47□□□□□ -1.85
ATG4AP1-201ENST00000416893 HHLA3Q9XRX5 114 aa3.47□□□□□ -1.85
ATG4AP1-201ENST00000416893 KLK5Q9Y337 293 aaPredicted RBP3.47□□□□□ -1.85
ATG4AP1-201ENST00000416893 DNAH2Q9P225 4427 aa3.47□□□□□ -1.85
ATG4AP1-201ENST00000416893 LOC107984156A0A0G2JMH3 177 aa3.46□□□□□ -1.86
ATG4AP1-201ENST00000416893 TRBV7-6A0A0J9YX20 115 aa3.46□□□□□ -1.86
ATG4AP1-201ENST00000416893 PGPA6NDG6 321 aa3.46□□□□□ -1.86
ATG4AP1-201ENST00000416893 LINC01546A6NGU7 62 aa3.46□□□□□ -1.86
ATG4AP1-201ENST00000416893 KNCNA6PVL3 124 aa3.46□□□□□ -1.86
ATG4AP1-201ENST00000416893 SOCS3O14543 225 aa3.46□□□□□ -1.86
ATG4AP1-201ENST00000416893 SPINK4O60575 86 aa3.46□□□□□ -1.86
ATG4AP1-201ENST00000416893 BCE1O60756 84 aa3.46□□□□□ -1.86
ATG4AP1-201ENST00000416893 ARL14EPLP0DKL9 152 aa3.46□□□□□ -1.86
ATG4AP1-201ENST00000416893 APOC4P55056 127 aa3.46□□□□□ -1.86
ATG4AP1-201ENST00000416893 CMC4P56277 68 aaPredicted RBP3.46□□□□□ -1.86
ATG4AP1-201ENST00000416893 ATP5EP56381 51 aaPredicted RBP3.46□□□□□ -1.86
ATG4AP1-201ENST00000416893 SNRPD3P62318 126 aaKnown RBP3.46□□□□□ -1.86
ATG4AP1-201ENST00000416893 CACNG7P62955 275 aa3.46□□□□□ -1.86
ATG4AP1-201ENST00000416893 RPL18AQ02543 176 aaKnown RBP3.46□□□□□ -1.86
ATG4AP1-201ENST00000416893 ATXN8Q156A1 80 aa3.46□□□□□ -1.86
ATG4AP1-201ENST00000416893 ZNF56Q15929 161 aa3.46□□□□□ -1.86
ATG4AP1-201ENST00000416893 DEFB135Q30KP9 77 aa3.46□□□□□ -1.86
ATG4AP1-201ENST00000416893 ZC2HC1BQ5TFG8 222 aa3.46□□□□□ -1.86
ATG4AP1-201ENST00000416893 PATE2Q6UY27 113 aa3.46□□□□□ -1.86
ATG4AP1-201ENST00000416893 MRPL55Q7Z7F7 128 aaKnown RBP3.46□□□□□ -1.86
ATG4AP1-201ENST00000416893 ARL17AQ8IVW1 177 aa3.46□□□□□ -1.86
ATG4AP1-201ENST00000416893 OVOL2Q9BRP0 275 aa3.46□□□□□ -1.86
ATG4AP1-201ENST00000416893 UPK3BQ9BT76 320 aa3.46□□□□□ -1.86
ATG4AP1-201ENST00000416893 TRBV19A0A075B6N1 114 aa3.45□□□□□ -1.86
ATG4AP1-201ENST00000416893 hADV29S1A0JD25 119 aa3.45□□□□□ -1.86
ATG4AP1-201ENST00000416893 LINC01549A6NIU2 74 aa3.45□□□□□ -1.86
ATG4AP1-201ENST00000416893 HIGD1CA8MV81 97 aa3.45□□□□□ -1.86
ATG4AP1-201ENST00000416893 COX7A2P2O60397 106 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms