RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 LINC00474Q9P2X8 69 aa7.14□□□□□ -1.27
RFFL-204ENST00000414419 DMBT1Q9UGM3 2413 aaPredicted RBP7.14□□□□□ -1.27
RFFL-204ENST00000414419 CYSLTR1Q9Y271 337 aa7.14□□□□□ -1.27
RFFL-204ENST00000414419 PYGO1Q9Y3Y4 419 aa7.14□□□□□ -1.27
RFFL-204ENST00000414419 TGIF2-C20orf24A0A0A6YYL0 155 aa7.13□□□□□ -1.27
RFFL-204ENST00000414419 J3QL48 77 aa7.13□□□□□ -1.27
RFFL-204ENST00000414419 G0S2P27469 103 aa7.13□□□□□ -1.27
RFFL-204ENST00000414419 C2orf66Q6UXQ4 117 aa7.13□□□□□ -1.27
RFFL-204ENST00000414419 Q6ZN92 141 aa7.13□□□□□ -1.27
RFFL-204ENST00000414419 TMEM141Q96I45 108 aa7.13□□□□□ -1.27
RFFL-204ENST00000414419 KIAA1644Q3SXP7 199 aa7.12□□□□□ -1.27
RFFL-204ENST00000414419 COX19Q49B96 90 aa7.12□□□□□ -1.27
RFFL-204ENST00000414419 TEX43Q6ZNM6 134 aa7.12□□□□□ -1.27
RFFL-204ENST00000414419 OR10D4PQ8NGN7 298 aa7.12□□□□□ -1.27
RFFL-204ENST00000414419 C7orf33Q8WU49 177 aa7.12□□□□□ -1.27
RFFL-204ENST00000414419 FAM104AQ969W3 186 aa7.12□□□□□ -1.27
RFFL-204ENST00000414419 C2orf88Q9BSF0 95 aa7.12□□□□□ -1.27
RFFL-204ENST00000414419 RPS10P5Q9NQ39 176 aa7.12□□□□□ -1.27
RFFL-204ENST00000414419 PLAC8Q9NZF1 115 aa7.12□□□□□ -1.27
RFFL-204ENST00000414419 IGLV4-3A0A075B6K6 122 aa7.11□□□□□ -1.27
RFFL-204ENST00000414419 A0A096LNI7 61 aa7.11□□□□□ -1.27
RFFL-204ENST00000414419 S100A1P23297 94 aa7.11□□□□□ -1.27
RFFL-204ENST00000414419 SPAG11BQ08648 103 aa7.11□□□□□ -1.27
RFFL-204ENST00000414419 RHEBQ15382 184 aa7.11□□□□□ -1.27
RFFL-204ENST00000414419 Q6ZRU5 148 aa7.11□□□□□ -1.27
RFFL-204ENST00000414419 STPG4Q8N801 248 aa7.11□□□□□ -1.27
RFFL-204ENST00000414419 ORAOV1Q8WV07 137 aa7.11□□□□□ -1.27
RFFL-204ENST00000414419 C2orf48Q96LS8 159 aa7.11□□□□□ -1.27
RFFL-204ENST00000414419 GNB1LQ9BYB4 327 aa7.11□□□□□ -1.27
RFFL-204ENST00000414419 IGHV3OR16-9A0A0B4J2B5 98 aa7.1□□□□□ -1.27
RFFL-204ENST00000414419 LOC107984640A0A0U1RRK4 108 aa7.1□□□□□ -1.27
RFFL-204ENST00000414419 KRTAP10-4P60372 401 aaPredicted RBP7.1□□□□□ -1.27
RFFL-204ENST00000414419 NDUFA5Q16718 116 aa7.1□□□□□ -1.27
RFFL-204ENST00000414419 PAPPA-AS1Q5QFB9 102 aa7.1□□□□□ -1.27
RFFL-204ENST00000414419 C10orf91Q5T1B1 145 aa7.1□□□□□ -1.27
RFFL-204ENST00000414419 VCX2Q9H322 139 aa7.1□□□□□ -1.27
RFFL-204ENST00000414419 F8WDY8 70 aa7.09□□□□□ -1.27
RFFL-204ENST00000414419 MT-ND6P03923 174 aa7.09□□□□□ -1.27
RFFL-204ENST00000414419 NPSP0C0P6 89 aa7.09□□□□□ -1.27
RFFL-204ENST00000414419 GAGE2BQ13066 116 aa7.09□□□□□ -1.27
RFFL-204ENST00000414419 CARHSP1Q9Y2V2 147 aaKnown RBP7.09□□□□□ -1.27
RFFL-204ENST00000414419 FABP9Q0Z7S8 132 aa7.08□□□□□ -1.28
RFFL-204ENST00000414419 LINC00242Q5T6M2 205 aa7.08□□□□□ -1.28
RFFL-204ENST00000414419 A0A087WZ39 114 aa7.07□□□□□ -1.28
RFFL-204ENST00000414419 KRTAP29-1A8MX34 341 aaPredicted RBP7.07□□□□□ -1.28
RFFL-204ENST00000414419 NDUFA1O15239 70 aa7.07□□□□□ -1.28
RFFL-204ENST00000414419 APOC3P02656 99 aa7.07□□□□□ -1.28
RFFL-204ENST00000414419 UBE2D1P51668 147 aa7.07□□□□□ -1.28
RFFL-204ENST00000414419 PTTG1IPP53801 180 aa7.07□□□□□ -1.28
RFFL-204ENST00000414419 RPL18AQ02543 176 aaKnown RBP7.07□□□□□ -1.28
RFFL-204ENST00000414419 RNF151Q2KHN1 245 aa7.07□□□□□ -1.28
RFFL-204ENST00000414419 AMELXQ99217 191 aa7.07□□□□□ -1.28
RFFL-204ENST00000414419 MRPL18Q9H0U6 180 aaKnown RBP7.07□□□□□ -1.28
RFFL-204ENST00000414419 LINC01549A6NIU2 74 aa7.06□□□□□ -1.28
RFFL-204ENST00000414419 IGIPA6NJ69 53 aa7.06□□□□□ -1.28
RFFL-204ENST00000414419 SNAPINO95295 136 aa7.06□□□□□ -1.28
RFFL-204ENST00000414419 SEC11AP67812 179 aa7.06□□□□□ -1.28
RFFL-204ENST00000414419 ZC2HC1BQ5TFG8 222 aa7.06□□□□□ -1.28
RFFL-204ENST00000414419 TOMM6Q96B49 74 aa7.06□□□□□ -1.28
RFFL-204ENST00000414419 SCGB3A1Q96QR1 104 aa7.06□□□□□ -1.28
RFFL-204ENST00000414419 TIMM17AQ99595 171 aa7.06□□□□□ -1.28
RFFL-204ENST00000414419 ALKBH7Q9BT30 221 aaPredicted RBP7.06□□□□□ -1.28
RFFL-204ENST00000414419 SMCO4Q9NRQ5 59 aa7.06□□□□□ -1.28
RFFL-204ENST00000414419 MRPL35Q9NZE8 188 aaKnown RBP7.06□□□□□ -1.28
RFFL-204ENST00000414419 MYCBP2O75592 4640 aa7.05□□□□□ -1.28
RFFL-204ENST00000414419 A0A0J9YXV3 536 aa7.05□□□□□ -1.28
RFFL-204ENST00000414419 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.05□□□□□ -1.28
RFFL-204ENST00000414419 OXTP01178 125 aa7.05□□□□□ -1.28
RFFL-204ENST00000414419 PRSS2P07478 247 aa7.05□□□□□ -1.28
RFFL-204ENST00000414419 FA2HQ7L5A8 372 aa7.05□□□□□ -1.28
RFFL-204ENST00000414419 ERASQ7Z444 233 aa7.05□□□□□ -1.28
RFFL-204ENST00000414419 LINC01561Q8N1V8 128 aa7.05□□□□□ -1.28
RFFL-204ENST00000414419 SVBPQ8N300 66 aa7.05□□□□□ -1.28
RFFL-204ENST00000414419 HERVK_113P63121 156 aa7.04□□□□□ -1.28
RFFL-204ENST00000414419 LINC00173Q6ZV60 143 aa7.04□□□□□ -1.28
RFFL-204ENST00000414419 PACRGQ96M98 296 aaPredicted RBP7.04□□□□□ -1.28
RFFL-204ENST00000414419 GEMIN7Q9H840 131 aaKnown RBP7.04□□□□□ -1.28
RFFL-204ENST00000414419 TRAPPC1Q9Y5R8 145 aa7.04□□□□□ -1.28
RFFL-204ENST00000414419 HNRNPA3P51991 378 aaKnown RBP7.03□□□□□ -1.28
RFFL-204ENST00000414419 UNQ6190/PRO20217Q6UXQ8 127 aa7.03□□□□□ -1.28
RFFL-204ENST00000414419 TOMM7Q9P0U1 55 aa7.03□□□□□ -1.28
RFFL-204ENST00000414419 CKS1BP61024 79 aa7.02□□□□□ -1.29
RFFL-204ENST00000414419 C10orf25Q5T742 122 aa7.02□□□□□ -1.29
RFFL-204ENST00000414419 FAM19A3Q7Z5A8 133 aa7.02□□□□□ -1.29
RFFL-204ENST00000414419 TRBV30A0A0K0K1B3 111 aa7.01□□□□□ -1.29
RFFL-204ENST00000414419 LINC01546A6NGU7 62 aa7.01□□□□□ -1.29
RFFL-204ENST00000414419 PRR3P79522 188 aaKnown RBP7.01□□□□□ -1.29
RFFL-204ENST00000414419 KIAA0087Q14695 138 aa7.01□□□□□ -1.29
RFFL-204ENST00000414419 C9orf116Q5BN46 136 aaPredicted RBP7.01□□□□□ -1.29
RFFL-204ENST00000414419 C6orf226Q5I0X4 101 aa7.01□□□□□ -1.29
RFFL-204ENST00000414419 Q6ZRP5 223 aa7.01□□□□□ -1.29
RFFL-204ENST00000414419 C6orf48Q9UBA6 75 aa7.01□□□□□ -1.29
RFFL-204ENST00000414419 A0A1W2PNN7 141 aa7□□□□□ -1.29
RFFL-204ENST00000414419 TLX1NBP0CAT3 122 aa7□□□□□ -1.29
RFFL-204ENST00000414419 GAGE2EQ4V326 116 aa7□□□□□ -1.29
RFFL-204ENST00000414419 C2orf82Q6UX34 121 aa7□□□□□ -1.29
RFFL-204ENST00000414419 LINC00469Q8N7U9 141 aa7□□□□□ -1.29
RFFL-204ENST00000414419 GAGE2DQ9UEU5 116 aa7□□□□□ -1.29
RFFL-204ENST00000414419 CDKN2A-AS1Q9UH64 79 aa7□□□□□ -1.29
RFFL-204ENST00000414419 LINC00614P0C842 121 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms