RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 IGHV3OR16-9A0A0B4J2B5 98 aa16.55■□□□□ 0.24
VEGFA-207ENST00000413642 COMMD7Q86VX2 200 aa16.55■□□□□ 0.24
VEGFA-207ENST00000413642 CAMK2N2Q96S95 79 aa16.55■□□□□ 0.24
VEGFA-207ENST00000413642 CTDSP1Q9GZU7 261 aa16.55■□□□□ 0.24
VEGFA-207ENST00000413642 SPAG11BQ08648 103 aa16.54■□□□□ 0.24
VEGFA-207ENST00000413642 KIAA1644Q3SXP7 199 aa16.54■□□□□ 0.24
VEGFA-207ENST00000413642 PYGO1Q9Y3Y4 419 aa16.54■□□□□ 0.24
VEGFA-207ENST00000413642 LRP1Q07954 4544 aaKnown RBP16.53■□□□□ 0.24
VEGFA-207ENST00000413642 APOMO95445 188 aa16.53■□□□□ 0.24
VEGFA-207ENST00000413642 ZC2HC1BQ5TFG8 222 aa16.53■□□□□ 0.24
VEGFA-207ENST00000413642 C2orf48Q96LS8 159 aa16.52■□□□□ 0.24
VEGFA-207ENST00000413642 SEC11CQ9BY50 192 aa16.52■□□□□ 0.24
VEGFA-207ENST00000413642 GAGE2BQ13066 116 aa16.51■□□□□ 0.23
VEGFA-207ENST00000413642 C2orf66Q6UXQ4 117 aa16.51■□□□□ 0.23
VEGFA-207ENST00000413642 ORAOV1Q8WV07 137 aa16.51■□□□□ 0.23
VEGFA-207ENST00000413642 A0A0J9YXV3 536 aa16.5■□□□□ 0.23
VEGFA-207ENST00000413642 C7orf33Q8WU49 177 aa16.5■□□□□ 0.23
VEGFA-207ENST00000413642 PKHD1L1Q86WI1 4243 aa16.5■□□□□ 0.23
VEGFA-207ENST00000413642 LOC107984640A0A0U1RRK4 108 aa16.49■□□□□ 0.23
VEGFA-207ENST00000413642 OXTP01178 125 aa16.49■□□□□ 0.23
VEGFA-207ENST00000413642 PTTG1IPP53801 180 aa16.49■□□□□ 0.23
VEGFA-207ENST00000413642 LINC00242Q5T6M2 205 aa16.49■□□□□ 0.23
VEGFA-207ENST00000413642 TMEM141Q96I45 108 aa16.49■□□□□ 0.23
VEGFA-207ENST00000413642 LINC00474Q9P2X8 69 aa16.49■□□□□ 0.23
VEGFA-207ENST00000413642 CYSLTR1Q9Y271 337 aa16.49■□□□□ 0.23
VEGFA-207ENST00000413642 PKIGQ9Y2B9 76 aa16.49■□□□□ 0.23
VEGFA-207ENST00000413642 OR10D4PQ8NGN7 298 aa16.48■□□□□ 0.23
VEGFA-207ENST00000413642 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.47■□□□□ 0.23
VEGFA-207ENST00000413642 FAT3Q8TDW7 4589 aa16.47■□□□□ 0.23
VEGFA-207ENST00000413642 ORMDL2Q53FV1 153 aa16.46■□□□□ 0.23
VEGFA-207ENST00000413642 LINC00173Q6ZV60 143 aa16.46■□□□□ 0.23
VEGFA-207ENST00000413642 TRAV9-1A0A075B6T8 112 aa16.45■□□□□ 0.22
VEGFA-207ENST00000413642 TGIF2-C20orf24A0A0A6YYL0 155 aa16.45■□□□□ 0.22
VEGFA-207ENST00000413642 C10orf25Q5T742 122 aa16.45■□□□□ 0.22
VEGFA-207ENST00000413642 TEX43Q6ZNM6 134 aa16.45■□□□□ 0.22
VEGFA-207ENST00000413642 NXT2Q9NPJ8 142 aaKnown RBP16.45■□□□□ 0.22
VEGFA-207ENST00000413642 IGIPA6NJ69 53 aa16.44■□□□□ 0.22
VEGFA-207ENST00000413642 UBE2D1P51668 147 aa16.44■□□□□ 0.22
VEGFA-207ENST00000413642 A0A087WZ39 114 aa16.43■□□□□ 0.22
VEGFA-207ENST00000413642 A0A1W2PNN7 141 aa16.43■□□□□ 0.22
VEGFA-207ENST00000413642 C10orf91Q5T1B1 145 aa16.43■□□□□ 0.22
VEGFA-207ENST00000413642 S100PP25815 95 aa16.42■□□□□ 0.22
VEGFA-207ENST00000413642 PRR3P79522 188 aaKnown RBP16.42■□□□□ 0.22
VEGFA-207ENST00000413642 RPL18AQ02543 176 aaKnown RBP16.42■□□□□ 0.22
VEGFA-207ENST00000413642 UNQ6190/PRO20217Q6UXQ8 127 aa16.42■□□□□ 0.22
VEGFA-207ENST00000413642 AMELXQ99217 191 aa16.42■□□□□ 0.22
VEGFA-207ENST00000413642 K7EMI3 77 aa16.41■□□□□ 0.22
VEGFA-207ENST00000413642 VCX2Q9H322 139 aa16.41■□□□□ 0.22
VEGFA-207ENST00000413642 KIAA0087Q14695 138 aa16.4■□□□□ 0.22
VEGFA-207ENST00000413642 RNF151Q2KHN1 245 aa16.4■□□□□ 0.22
VEGFA-207ENST00000413642 Q6ZN92 141 aa16.4■□□□□ 0.22
VEGFA-207ENST00000413642 GNB1LQ9BYB4 327 aa16.4■□□□□ 0.22
VEGFA-207ENST00000413642 MRPL35Q9NZE8 188 aaKnown RBP16.4■□□□□ 0.22
VEGFA-207ENST00000413642 CARHSP1Q9Y2V2 147 aaKnown RBP16.4■□□□□ 0.22
VEGFA-207ENST00000413642 NDUFA1O15239 70 aa16.39■□□□□ 0.21
VEGFA-207ENST00000413642 C2orf88Q9BSF0 95 aa16.39■□□□□ 0.21
VEGFA-207ENST00000413642 RPS10P5Q9NQ39 176 aa16.39■□□□□ 0.21
VEGFA-207ENST00000413642 C6orf48Q9UBA6 75 aa16.39■□□□□ 0.21
VEGFA-207ENST00000413642 ALKBH7Q9BT30 221 aaPredicted RBP16.38■□□□□ 0.21
VEGFA-207ENST00000413642 C9orf116Q5BN46 136 aaPredicted RBP16.37■□□□□ 0.21
VEGFA-207ENST00000413642 F8WDY8 70 aa16.36■□□□□ 0.21
VEGFA-207ENST00000413642 TOMM6Q96B49 74 aa16.36■□□□□ 0.21
VEGFA-207ENST00000413642 C2orf82Q6UX34 121 aa16.35■□□□□ 0.21
VEGFA-207ENST00000413642 NPSP0C0P6 89 aa16.34■□□□□ 0.21
VEGFA-207ENST00000413642 MRPL18Q9H0U6 180 aaKnown RBP16.34■□□□□ 0.21
VEGFA-207ENST00000413642 MT1HL1P0DM35 61 aa16.33■□□□□ 0.2
VEGFA-207ENST00000413642 RHEBQ15382 184 aa16.33■□□□□ 0.2
VEGFA-207ENST00000413642 FABP9Q0Z7S8 132 aa16.32■□□□□ 0.2
VEGFA-207ENST00000413642 Q6ZRP5 223 aa16.32■□□□□ 0.2
VEGFA-207ENST00000413642 TIMM17AQ99595 171 aa16.32■□□□□ 0.2
VEGFA-207ENST00000413642 FAM19A3Q7Z5A8 133 aa16.31■□□□□ 0.2
VEGFA-207ENST00000413642 SCGB3A1Q96QR1 104 aa16.31■□□□□ 0.2
VEGFA-207ENST00000413642 FAM168BA1KXE4 195 aa16.3■□□□□ 0.2
VEGFA-207ENST00000413642 G0S2P27469 103 aa16.3■□□□□ 0.2
VEGFA-207ENST00000413642 COX19Q49B96 90 aa16.3■□□□□ 0.2
VEGFA-207ENST00000413642 PHF5AQ7RTV0 110 aaKnown RBP16.3■□□□□ 0.2
VEGFA-207ENST00000413642 LINC01561Q8N1V8 128 aa16.3■□□□□ 0.2
VEGFA-207ENST00000413642 LINC01546A6NGU7 62 aa16.29■□□□□ 0.2
VEGFA-207ENST00000413642 GAGE2EQ4V326 116 aa16.29■□□□□ 0.2
VEGFA-207ENST00000413642 ERASQ7Z444 233 aa16.29■□□□□ 0.2
VEGFA-207ENST00000413642 GAGE2DQ9UEU5 116 aa16.29■□□□□ 0.2
VEGFA-207ENST00000413642 TLX1NBP0CAT3 122 aa16.28■□□□□ 0.2
VEGFA-207ENST00000413642 TOMM7Q9P0U1 55 aa16.28■□□□□ 0.2
VEGFA-207ENST00000413642 CDKN2A-AS1Q9UH64 79 aa16.28■□□□□ 0.2
VEGFA-207ENST00000413642 MT-ND6P03923 174 aa16.27■□□□□ 0.2
VEGFA-207ENST00000413642 PAPPA-AS1Q5QFB9 102 aa16.27■□□□□ 0.2
VEGFA-207ENST00000413642 APOC3P02656 99 aa16.26■□□□□ 0.19
VEGFA-207ENST00000413642 GEMIN7Q9H840 131 aaKnown RBP16.25■□□□□ 0.19
VEGFA-207ENST00000413642 TRBV30A0A0K0K1B3 111 aa16.24■□□□□ 0.19
VEGFA-207ENST00000413642 HERVK_113P63121 156 aa16.24■□□□□ 0.19
VEGFA-207ENST00000413642 SRSF9Q13242 221 aaKnown RBP eCLIP16.24■□□□□ 0.19
VEGFA-207ENST00000413642 FA2HQ7L5A8 372 aa16.24■□□□□ 0.19
VEGFA-207ENST00000413642 PRSS2P07478 247 aa16.23■□□□□ 0.19
VEGFA-207ENST00000413642 FAM19A5Q7Z5A7 132 aaPredicted RBP16.23■□□□□ 0.19
VEGFA-207ENST00000413642 KRTAP7-1Q8IUC3 87 aa16.23■□□□□ 0.19
VEGFA-207ENST00000413642 PACRGQ96M98 296 aaPredicted RBP16.23■□□□□ 0.19
VEGFA-207ENST00000413642 PSORS1C2Q9UIG4 136 aa16.23■□□□□ 0.19
VEGFA-207ENST00000413642 SEC11AP67812 179 aa16.22■□□□□ 0.19
VEGFA-207ENST00000413642 SERTAD4-AS1Q5TG53 156 aa16.22■□□□□ 0.19
VEGFA-207ENST00000413642 SPINK6Q6UWN8 80 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms