RNA–Protein interactions for RNA: ENST00000410604.1

RNU2-39P-201, Transcript of RNA, U2 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU2-39P, Length 198 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-39P-201ENST00000410604 HMGN4O00479 90 aa-0.88□□□□□ -2.55
RNU2-39P-201ENST00000410604 NAA60Q9H7X0 242 aa-0.88□□□□□ -2.55
RNU2-39P-201ENST00000410604 CPSF1Q10570 1443 aaKnown RBP-0.89□□□□□ -2.55
RNU2-39P-201ENST00000410604 NSD3Q9BZ95 1437 aa-0.89□□□□□ -2.55
RNU2-39P-201ENST00000410604 SFT2D2O95562 160 aa-0.89□□□□□ -2.55
RNU2-39P-201ENST00000410604 KIAA0556O60303 1618 aa-0.89□□□□□ -2.55
RNU2-39P-201ENST00000410604 TULP4Q9NRJ4 1543 aa-0.89□□□□□ -2.55
RNU2-39P-201ENST00000410604 TRBV7-4A0A0J9YYF1 115 aa-0.9□□□□□ -2.55
RNU2-39P-201ENST00000410604 SELENOWP63302 87 aa-0.9□□□□□ -2.55
RNU2-39P-201ENST00000410604 MEIG1Q5JSS6 88 aa-0.9□□□□□ -2.55
RNU2-39P-201ENST00000410604 ARL11Q969Q4 196 aa-0.9□□□□□ -2.55
RNU2-39P-201ENST00000410604 LINC00470Q9BZP3 86 aa-0.9□□□□□ -2.55
RNU2-39P-201ENST00000410604 FMN2Q9NZ56 1722 aa-0.9□□□□□ -2.55
RNU2-39P-201ENST00000410604 QRICH2Q9H0J4 1663 aa-0.91□□□□□ -2.55
RNU2-39P-201ENST00000410604 LOC285095A0A1B0GVY8 99 aa-0.91□□□□□ -2.56
RNU2-39P-201ENST00000410604 SYS1-DBNDD2H3BUS1 97 aa-0.91□□□□□ -2.56
RNU2-39P-201ENST00000410604 MGPP08493 103 aa-0.91□□□□□ -2.56
RNU2-39P-201ENST00000410604 SPRR2AP35326 72 aa-0.91□□□□□ -2.56
RNU2-39P-201ENST00000410604 BTG2P78543 158 aa-0.91□□□□□ -2.56
RNU2-39P-201ENST00000410604 KRTAP6-2Q3LI66 62 aa-0.91□□□□□ -2.56
RNU2-39P-201ENST00000410604 PPP3R2Q96LZ3 170 aa-0.91□□□□□ -2.56
RNU2-39P-201ENST00000410604 SPANXDQ9BXN6 97 aa-0.91□□□□□ -2.56
RNU2-39P-201ENST00000410604 EPG5Q9HCE0 2579 aa-0.91□□□□□ -2.56
RNU2-39P-201ENST00000410604 TET3O43151 1660 aa-0.91□□□□□ -2.56
RNU2-39P-201ENST00000410604 MBD5Q9P267 1494 aa-0.92□□□□□ -2.56
RNU2-39P-201ENST00000410604 MIF4GDA9UHW6 222 aaKnown RBP-0.92□□□□□ -2.56
RNU2-39P-201ENST00000410604 C10orf113Q5VZT2 155 aa-0.92□□□□□ -2.56
RNU2-39P-201ENST00000410604 MRPL54Q6P161 138 aaKnown RBP-0.92□□□□□ -2.56
RNU2-39P-201ENST00000410604 TMEM263Q8WUH6 116 aaKnown RBP-0.92□□□□□ -2.56
RNU2-39P-201ENST00000410604 FAIMQ9NVQ4 179 aa-0.92□□□□□ -2.56
RNU2-39P-201ENST00000410604 HERC2O95714 4834 aa-0.93□□□□□ -2.56
RNU2-39P-201ENST00000410604 HMGXB3Q12766 1538 aa-0.93□□□□□ -2.56
RNU2-39P-201ENST00000410604 LINC00959A0A1B0GUT2 108 aa-0.93□□□□□ -2.56
RNU2-39P-201ENST00000410604 FAM25AB3EWG3 89 aa-0.93□□□□□ -2.56
RNU2-39P-201ENST00000410604 FAM25CB3EWG5 89 aa-0.93□□□□□ -2.56
RNU2-39P-201ENST00000410604 FAM25GB3EWG6 89 aa-0.93□□□□□ -2.56
RNU2-39P-201ENST00000410604 Q56UQ5 140 aa-0.93□□□□□ -2.56
RNU2-39P-201ENST00000410604 MAGI1Q96QZ7 1491 aaPredicted RBP-0.93□□□□□ -2.56
RNU2-39P-201ENST00000410604 DNAH6Q9C0G6 4158 aa-0.94□□□□□ -2.56
RNU2-39P-201ENST00000410604 SETBP1Q9Y6X0 1596 aa-0.94□□□□□ -2.56
RNU2-39P-201ENST00000410604 GNG7O60262 68 aa-0.94□□□□□ -2.56
RNU2-39P-201ENST00000410604 IGLC1P0CG04 106 aa-0.94□□□□□ -2.56
RNU2-39P-201ENST00000410604 COX8AP10176 69 aa-0.94□□□□□ -2.56
RNU2-39P-201ENST00000410604 UBA52P62987 128 aaKnown RBP-0.94□□□□□ -2.56
RNU2-39P-201ENST00000410604 KRTAP20-2Q3LI61 65 aa-0.94□□□□□ -2.56
RNU2-39P-201ENST00000410604 FDCSPQ8NFU4 85 aa-0.94□□□□□ -2.56
RNU2-39P-201ENST00000410604 NXT2Q9NPJ8 142 aaKnown RBP-0.94□□□□□ -2.56
RNU2-39P-201ENST00000410604 SPTBN4Q9H254 2564 aa-0.94□□□□□ -2.56
RNU2-39P-201ENST00000410604 HIVEP1P15822 2718 aa-0.95□□□□□ -2.56
RNU2-39P-201ENST00000410604 CHKB-CPT1BH3BT56 60 aa-0.95□□□□□ -2.56
RNU2-39P-201ENST00000410604 DEFB135Q30KP9 77 aa-0.95□□□□□ -2.56
RNU2-39P-201ENST00000410604 COMMD6Q7Z4G1 85 aa-0.95□□□□□ -2.56
RNU2-39P-201ENST00000410604 LINC01600Q96MT4 127 aa-0.95□□□□□ -2.56
RNU2-39P-201ENST00000410604 SPRR4Q96PI1 79 aa-0.95□□□□□ -2.56
RNU2-39P-201ENST00000410604 NBASA2RRP1 2371 aa-0.95□□□□□ -2.56
RNU2-39P-201ENST00000410604 SCN7AQ01118 1682 aa-0.95□□□□□ -2.56
RNU2-39P-201ENST00000410604 CUL7Q14999 1698 aa-0.95□□□□□ -2.56
RNU2-39P-201ENST00000410604 SMG6Q86US8 1419 aaKnown RBP-0.96□□□□□ -2.56
RNU2-39P-201ENST00000410604 HTTP42858 3142 aa-0.96□□□□□ -2.56
RNU2-39P-201ENST00000410604 TACC2O95359 2948 aa-0.96□□□□□ -2.56
RNU2-39P-201ENST00000410604 SSSCA1O60232 199 aa-0.96□□□□□ -2.56
RNU2-39P-201ENST00000410604 SPRR2EP22531 72 aa-0.96□□□□□ -2.56
RNU2-39P-201ENST00000410604 CATR1Q13166 79 aa-0.96□□□□□ -2.56
RNU2-39P-201ENST00000410604 C5orf38Q86SI9 138 aa-0.96□□□□□ -2.56
RNU2-39P-201ENST00000410604 C8orf59Q8N0T1 100 aaPredicted RBP-0.96□□□□□ -2.56
RNU2-39P-201ENST00000410604 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.96□□□□□ -2.56
RNU2-39P-201ENST00000410604 MYOZ3Q8TDC0 251 aa-0.96□□□□□ -2.56
RNU2-39P-201ENST00000410604 USMG5Q96IX5 58 aa-0.96□□□□□ -2.56
RNU2-39P-201ENST00000410604 LINC00474Q9P2X8 69 aa-0.96□□□□□ -2.56
RNU2-39P-201ENST00000410604 APLNQ9ULZ1 77 aa-0.96□□□□□ -2.56
RNU2-39P-201ENST00000410604 NUP188Q5SRE5 1749 aa-0.96□□□□□ -2.56
RNU2-39P-201ENST00000410604 PAPPA2Q9BXP8 1791 aa-0.96□□□□□ -2.56
RNU2-39P-201ENST00000410604 NAIPQ13075 1403 aa-0.97□□□□□ -2.56
RNU2-39P-201ENST00000410604 PRRC2CQ9Y520 2896 aaKnown RBP-0.97□□□□□ -2.56
RNU2-39P-201ENST00000410604 NDUFA2O43678 99 aa-0.97□□□□□ -2.56
RNU2-39P-201ENST00000410604 IFNGP01579 166 aa-0.97□□□□□ -2.56
RNU2-39P-201ENST00000410604 APOC2P02655 101 aa-0.97□□□□□ -2.56
RNU2-39P-201ENST00000410604 FAM223AQ8IWN6 122 aa-0.97□□□□□ -2.56
RNU2-39P-201ENST00000410604 UQCR10Q9UDW1 63 aa-0.97□□□□□ -2.56
RNU2-39P-201ENST00000410604 ARL2-SNX15V9GYD0 113 aa-0.97□□□□□ -2.56
RNU2-39P-201ENST00000410604 SPG11Q96JI7 2443 aa-0.97□□□□□ -2.57
RNU2-39P-201ENST00000410604 PKD1P98161 4303 aa-0.97□□□□□ -2.57
RNU2-39P-201ENST00000410604 AKAP9Q99996 3911 aa-0.97□□□□□ -2.57
RNU2-39P-201ENST00000410604 A0A0G2JMZ2 1700 aa-0.98□□□□□ -2.57
RNU2-39P-201ENST00000410604 XRN1Q8IZH2 1706 aaKnown RBP-0.98□□□□□ -2.57
RNU2-39P-201ENST00000410604 STARD9Q9P2P6 4700 aa-0.98□□□□□ -2.57
RNU2-39P-201ENST00000410604 FGF7P21781 194 aa-0.98□□□□□ -2.57
RNU2-39P-201ENST00000410604 WHAMMP3Q1A5X7 153 aa-0.98□□□□□ -2.57
RNU2-39P-201ENST00000410604 CCDC58Q4VC31 144 aa-0.98□□□□□ -2.57
RNU2-39P-201ENST00000410604 CDC42SE2Q9NRR3 84 aa-0.98□□□□□ -2.57
RNU2-39P-201ENST00000410604 USP9YO00507 2555 aaPredicted RBP-0.99□□□□□ -2.57
RNU2-39P-201ENST00000410604 USH2AO75445 5202 aa-0.99□□□□□ -2.57
RNU2-39P-201ENST00000410604 LOC100130705A0A1B0GUX0 176 aa-0.99□□□□□ -2.57
RNU2-39P-201ENST00000410604 CPSF4LA6NMK7 179 aaKnown RBP-0.99□□□□□ -2.57
RNU2-39P-201ENST00000410604 LCN9Q8WX39 176 aa-0.99□□□□□ -2.57
RNU2-39P-201ENST00000410604 REV3LO60673 3130 aa-0.99□□□□□ -2.57
RNU2-39P-201ENST00000410604 C1orf167Q5SNV9 1468 aa-0.99□□□□□ -2.57
RNU2-39P-201ENST00000410604 EHBP1L1Q8N3D4 1523 aa-0.99□□□□□ -2.57
RNU2-39P-201ENST00000410604 KNL1Q8NG31 2342 aa-1□□□□□ -2.57
RNU2-39P-201ENST00000410604 FAM167A-AS1Q96KT0 104 aa-1□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms