RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 UBE2D4Q9Y2X8 147 aa3.87□□□□□ -1.79
EPHA4-202ENST00000409854 F8VRH5 84 aa3.86□□□□□ -1.79
EPHA4-202ENST00000409854 LYRM7Q5U5X0 104 aa3.86□□□□□ -1.79
EPHA4-202ENST00000409854 IGLV4-3A0A075B6K6 122 aa3.86□□□□□ -1.79
EPHA4-202ENST00000409854 A0A0U1RRA0 63 aa3.86□□□□□ -1.79
EPHA4-202ENST00000409854 AMELXQ99217 191 aa3.86□□□□□ -1.79
EPHA4-202ENST00000409854 IMUPQ9GZP8 106 aa3.86□□□□□ -1.79
EPHA4-202ENST00000409854 MRPL35Q9NZE8 188 aaKnown RBP3.86□□□□□ -1.79
EPHA4-202ENST00000409854 PRSS29PA6NIE9 313 aa3.86□□□□□ -1.79
EPHA4-202ENST00000409854 DPM2O94777 84 aa3.86□□□□□ -1.79
EPHA4-202ENST00000409854 IGKCP01834 107 aa3.86□□□□□ -1.79
EPHA4-202ENST00000409854 PLNP26678 52 aa3.86□□□□□ -1.79
EPHA4-202ENST00000409854 C12orf74Q32Q52 190 aa3.86□□□□□ -1.79
EPHA4-202ENST00000409854 KRTAP21-3Q3LHN1 58 aa3.86□□□□□ -1.79
EPHA4-202ENST00000409854 VSIG2Q96IQ7 327 aa3.86□□□□□ -1.79
EPHA4-202ENST00000409854 HIGD1BQ9P298 99 aa3.86□□□□□ -1.79
EPHA4-202ENST00000409854 IGLV4-69A0A075B6H9 119 aa3.85□□□□□ -1.79
EPHA4-202ENST00000409854 E9PLD3 99 aa3.85□□□□□ -1.79
EPHA4-202ENST00000409854 H7C423 109 aa3.85□□□□□ -1.79
EPHA4-202ENST00000409854 UQCRQO14949 82 aa3.85□□□□□ -1.79
EPHA4-202ENST00000409854 MRPS36P82909 103 aaKnown RBP3.85□□□□□ -1.79
EPHA4-202ENST00000409854 NAA38Q9BRA0 125 aaKnown RBP3.85□□□□□ -1.79
EPHA4-202ENST00000409854 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.85□□□□□ -1.79
EPHA4-202ENST00000409854 IGKV2-29A2NJV5 120 aaPredicted RBP3.85□□□□□ -1.79
EPHA4-202ENST00000409854 PRB2P02812 416 aaPredicted RBP3.85□□□□□ -1.79
EPHA4-202ENST00000409854 GYPEP15421 78 aa3.85□□□□□ -1.79
EPHA4-202ENST00000409854 PAPPA-AS1Q5QFB9 102 aa3.85□□□□□ -1.79
EPHA4-202ENST00000409854 C2orf91Q6ZV80 131 aa3.85□□□□□ -1.79
EPHA4-202ENST00000409854 PLEKHB2Q96CS7 222 aa3.85□□□□□ -1.79
EPHA4-202ENST00000409854 PAX4O43316 350 aa3.85□□□□□ -1.79
EPHA4-202ENST00000409854 TAL2Q16559 108 aa3.85□□□□□ -1.79
EPHA4-202ENST00000409854 PRO0461Q9UI25 63 aa3.85□□□□□ -1.79
EPHA4-202ENST00000409854 TRBV6-8A0A0A6YYG3 113 aa3.84□□□□□ -1.79
EPHA4-202ENST00000409854 NMUP48645 174 aa3.84□□□□□ -1.79
EPHA4-202ENST00000409854 TMEM258P61165 79 aa3.84□□□□□ -1.79
EPHA4-202ENST00000409854 NFE4Q86UQ8 179 aa3.84□□□□□ -1.79
EPHA4-202ENST00000409854 OPRPNQ99935 248 aaPredicted RBP3.84□□□□□ -1.79
EPHA4-202ENST00000409854 NBEAL2Q6ZNJ1 2754 aa3.84□□□□□ -1.79
EPHA4-202ENST00000409854 TRBV25-1A0A075B6N4 114 aa3.84□□□□□ -1.8
EPHA4-202ENST00000409854 H3BNG1 76 aa3.84□□□□□ -1.8
EPHA4-202ENST00000409854 ETDBQ3ZM63 59 aa3.84□□□□□ -1.8
EPHA4-202ENST00000409854 ZC2HC1BQ5TFG8 222 aa3.84□□□□□ -1.8
EPHA4-202ENST00000409854 LINC00336Q6ZUF6 198 aa3.84□□□□□ -1.8
EPHA4-202ENST00000409854 LINC00526Q96FQ7 95 aa3.84□□□□□ -1.8
EPHA4-202ENST00000409854 TMEM243Q9BU79 118 aa3.84□□□□□ -1.8
EPHA4-202ENST00000409854 A0A0J9YWU9 116 aa3.83□□□□□ -1.8
EPHA4-202ENST00000409854 CEMP1Q6PRD7 247 aaPredicted RBP3.83□□□□□ -1.8
EPHA4-202ENST00000409854 FAM19A3Q7Z5A8 133 aa3.83□□□□□ -1.8
EPHA4-202ENST00000409854 C3orf22Q8N5N4 141 aa3.83□□□□□ -1.8
EPHA4-202ENST00000409854 FGF6P10767 208 aa3.83□□□□□ -1.8
EPHA4-202ENST00000409854 WFDC2Q14508 124 aa3.83□□□□□ -1.8
EPHA4-202ENST00000409854 TEN1Q86WV5 123 aa3.83□□□□□ -1.8
EPHA4-202ENST00000409854 C1orf43Q9BWL3 253 aa3.83□□□□□ -1.8
EPHA4-202ENST00000409854 C11orf86A6NJI1 115 aa3.83□□□□□ -1.8
EPHA4-202ENST00000409854 SH2D6Q7Z4S9 175 aa3.83□□□□□ -1.8
EPHA4-202ENST00000409854 A0A1B0GWB2 263 aa3.82□□□□□ -1.8
EPHA4-202ENST00000409854 IGKV2D-26A0A0A0MRZ7 120 aa3.82□□□□□ -1.8
EPHA4-202ENST00000409854 A0A0J9YY99 117 aa3.82□□□□□ -1.8
EPHA4-202ENST00000409854 DEFB121Q5J5C9 76 aa3.82□□□□□ -1.8
EPHA4-202ENST00000409854 Q6ZTC4 211 aa3.82□□□□□ -1.8
EPHA4-202ENST00000409854 LINC01600Q96MT4 127 aa3.82□□□□□ -1.8
EPHA4-202ENST00000409854 CDC42SE2Q9NRR3 84 aa3.82□□□□□ -1.8
EPHA4-202ENST00000409854 ICOSQ9Y6W8 199 aa3.82□□□□□ -1.8
EPHA4-202ENST00000409854 A0A096LPF7 62 aa3.82□□□□□ -1.8
EPHA4-202ENST00000409854 UBE2L6O14933 153 aa3.82□□□□□ -1.8
EPHA4-202ENST00000409854 CRYGAP11844 174 aa3.82□□□□□ -1.8
EPHA4-202ENST00000409854 UBE2D1P51668 147 aa3.82□□□□□ -1.8
EPHA4-202ENST00000409854 C1orf195Q5TG92 126 aa3.82□□□□□ -1.8
EPHA4-202ENST00000409854 C11orf45Q8TAV5 145 aa3.82□□□□□ -1.8
EPHA4-202ENST00000409854 CHAC1Q9BUX1 264 aa3.82□□□□□ -1.8
EPHA4-202ENST00000409854 IGLV5-45A0A087WSX0 123 aa3.81□□□□□ -1.8
EPHA4-202ENST00000409854 TRBV7-7A0A0K0K1E9 115 aa3.81□□□□□ -1.8
EPHA4-202ENST00000409854 ZNF22P17026 224 aaPredicted RBP3.81□□□□□ -1.8
EPHA4-202ENST00000409854 HERVK_113P63121 156 aa3.81□□□□□ -1.8
EPHA4-202ENST00000409854 C9orf153Q5TBE3 101 aa3.81□□□□□ -1.8
EPHA4-202ENST00000409854 B9D2Q9BPU9 175 aa3.81□□□□□ -1.8
EPHA4-202ENST00000409854 TTTY13Q9BZ97 58 aa3.81□□□□□ -1.8
EPHA4-202ENST00000409854 HUWE1Q7Z6Z7 4374 aaKnown RBP3.81□□□□□ -1.8
EPHA4-202ENST00000409854 TENM3Q9P273 2699 aa3.81□□□□□ -1.8
EPHA4-202ENST00000409854 A0A0J9YXV3 536 aa3.81□□□□□ -1.8
EPHA4-202ENST00000409854 A0A1B0GUV1 79 aa3.81□□□□□ -1.8
EPHA4-202ENST00000409854 HTN3P15516 51 aa3.81□□□□□ -1.8
EPHA4-202ENST00000409854 NANOS2P60321 138 aaKnown RBP3.81□□□□□ -1.8
EPHA4-202ENST00000409854 RNASE13Q5GAN3 156 aaKnown RBP3.81□□□□□ -1.8
EPHA4-202ENST00000409854 TMEM223A0PJW6 202 aa3.8□□□□□ -1.8
EPHA4-202ENST00000409854 NDUFC2O95298 119 aa3.8□□□□□ -1.8
EPHA4-202ENST00000409854 DGAT2L7PQ6IED9 249 aa3.8□□□□□ -1.8
EPHA4-202ENST00000409854 C10orf126Q8N4M7 172 aa3.8□□□□□ -1.8
EPHA4-202ENST00000409854 NBEAL1Q6ZS30 2694 aa3.8□□□□□ -1.8
EPHA4-202ENST00000409854 TRBV20-1A0A075B6N2 111 aa3.8□□□□□ -1.8
EPHA4-202ENST00000409854 FAM240AA0A1B0GVK7 77 aa3.8□□□□□ -1.8
EPHA4-202ENST00000409854 PCP2Q8IVA1 136 aa3.8□□□□□ -1.8
EPHA4-202ENST00000409854 CHCHD5Q9BSY4 110 aa3.8□□□□□ -1.8
EPHA4-202ENST00000409854 LAMTOR3Q9UHA4 124 aa3.8□□□□□ -1.8
EPHA4-202ENST00000409854 IGLV4-60A0A075B6I1 120 aa3.8□□□□□ -1.8
EPHA4-202ENST00000409854 NDUFC2-KCTD14E9PQ53 114 aa3.8□□□□□ -1.8
EPHA4-202ENST00000409854 LELP1Q5T871 98 aa3.8□□□□□ -1.8
EPHA4-202ENST00000409854 SFTA2Q6UW10 78 aa3.8□□□□□ -1.8
EPHA4-202ENST00000409854 DEFB131BA0A096LNP1 70 aa3.79□□□□□ -1.8
EPHA4-202ENST00000409854 IGLL5B9A064 214 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms