RNA–Protein interactions for RNA: ENST00000409751.1

RAB1A-202, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 5 BASIC

Gene RAB1A, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-202ENST00000409751 LINC00242Q5T6M2 205 aa13.96□□□□□ -0.17
RAB1A-202ENST00000409751 FAM19A2Q8N3H0 131 aa13.96□□□□□ -0.17
RAB1A-202ENST00000409751 PDZD11Q5EBL8 140 aa13.95□□□□□ -0.18
RAB1A-202ENST00000409751 HIST1H2BKO60814 126 aa13.94□□□□□ -0.18
RAB1A-202ENST00000409751 ATP5LO75964 103 aa13.94□□□□□ -0.18
RAB1A-202ENST00000409751 HIST1H2BJP06899 126 aa13.94□□□□□ -0.18
RAB1A-202ENST00000409751 HIST1H2BOP23527 126 aa13.94□□□□□ -0.18
RAB1A-202ENST00000409751 HIST1H2BBP33778 126 aa13.94□□□□□ -0.18
RAB1A-202ENST00000409751 HIST1H2BDP58876 126 aa13.94□□□□□ -0.18
RAB1A-202ENST00000409751 HIST1H2BCP62807 126 aa13.94□□□□□ -0.18
RAB1A-202ENST00000409751 COX6A2Q02221 97 aa13.94□□□□□ -0.18
RAB1A-202ENST00000409751 PMVKQ15126 192 aa13.94□□□□□ -0.18
RAB1A-202ENST00000409751 HIST2H2BEQ16778 126 aa13.94□□□□□ -0.18
RAB1A-202ENST00000409751 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.94□□□□□ -0.18
RAB1A-202ENST00000409751 HIST1H2BHQ93079 126 aa13.94□□□□□ -0.18
RAB1A-202ENST00000409751 HIST1H2BNQ99877 126 aa13.94□□□□□ -0.18
RAB1A-202ENST00000409751 HIST1H2BMQ99879 126 aa13.94□□□□□ -0.18
RAB1A-202ENST00000409751 APOMO95445 188 aa13.93□□□□□ -0.18
RAB1A-202ENST00000409751 LINC00310P59036 64 aa13.93□□□□□ -0.18
RAB1A-202ENST00000409751 LINC01620Q4KN68 170 aa13.93□□□□□ -0.18
RAB1A-202ENST00000409751 GEMIN7Q9H840 131 aaKnown RBP13.93□□□□□ -0.18
RAB1A-202ENST00000409751 GVQW2A0A096LPI5 108 aaPredicted RBP13.92□□□□□ -0.18
RAB1A-202ENST00000409751 IGHV3OR16-9A0A0B4J2B5 98 aa13.92□□□□□ -0.18
RAB1A-202ENST00000409751 A0A0J9YXV3 536 aa13.92□□□□□ -0.18
RAB1A-202ENST00000409751 ZNF561-AS1K7EIQ3 104 aa13.92□□□□□ -0.18
RAB1A-202ENST00000409751 LINC00526Q96FQ7 95 aa13.92□□□□□ -0.18
RAB1A-202ENST00000409751 CST9LQ9H4G1 147 aa13.92□□□□□ -0.18
RAB1A-202ENST00000409751 DNAH5Q8TE73 4624 aa13.92□□□□□ -0.18
RAB1A-202ENST00000409751 SEC11AP67812 179 aa13.91□□□□□ -0.18
RAB1A-202ENST00000409751 DYNC1H1Q14204 4646 aaKnown RBP13.91□□□□□ -0.18
RAB1A-202ENST00000409751 NUPR1O60356 82 aa13.9□□□□□ -0.18
RAB1A-202ENST00000409751 KRTAP10-1P60331 282 aa13.9□□□□□ -0.18
RAB1A-202ENST00000409751 HERVK_113P63121 156 aa13.9□□□□□ -0.18
RAB1A-202ENST00000409751 ORAOV1Q8WV07 137 aa13.9□□□□□ -0.18
RAB1A-202ENST00000409751 BIRC6Q9NR09 4857 aa13.9□□□□□ -0.18
RAB1A-202ENST00000409751 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.89□□□□□ -0.19
RAB1A-202ENST00000409751 SPAG11BQ08648 103 aa13.89□□□□□ -0.19
RAB1A-202ENST00000409751 FAM19A3Q7Z5A8 133 aa13.89□□□□□ -0.19
RAB1A-202ENST00000409751 IFI27L1Q96BM0 104 aa13.89□□□□□ -0.19
RAB1A-202ENST00000409751 A0A087WZ39 114 aa13.88□□□□□ -0.19
RAB1A-202ENST00000409751 LINC00469Q8N7U9 141 aa13.88□□□□□ -0.19
RAB1A-202ENST00000409751 IGLV4-69A0A075B6H9 119 aa13.87□□□□□ -0.19
RAB1A-202ENST00000409751 IGHV3-64A0A075B6Q5 118 aa13.87□□□□□ -0.19
RAB1A-202ENST00000409751 H0Y8G0 127 aa13.87□□□□□ -0.19
RAB1A-202ENST00000409751 LEPROTL1O95214 131 aa13.87□□□□□ -0.19
RAB1A-202ENST00000409751 FABP4P15090 132 aa13.87□□□□□ -0.19
RAB1A-202ENST00000409751 CNBPP62633 177 aaKnown RBP13.87□□□□□ -0.19
RAB1A-202ENST00000409751 PACRGQ96M98 296 aaPredicted RBP13.87□□□□□ -0.19
RAB1A-202ENST00000409751 TINCRA0A1B0GVN0 87 aa13.86□□□□□ -0.19
RAB1A-202ENST00000409751 SLPIP03973 132 aa13.86□□□□□ -0.19
RAB1A-202ENST00000409751 OR10D4PQ8NGN7 298 aa13.86□□□□□ -0.19
RAB1A-202ENST00000409751 CDKN2A-AS1Q9UH64 79 aa13.86□□□□□ -0.19
RAB1A-202ENST00000409751 CAMK2N2Q96S95 79 aa13.85□□□□□ -0.19
RAB1A-202ENST00000409751 CHAC1Q9BUX1 264 aa13.85□□□□□ -0.19
RAB1A-202ENST00000409751 C9orf163Q8N9P6 203 aa13.84□□□□□ -0.19
RAB1A-202ENST00000409751 CARD19Q96LW7 228 aa13.84□□□□□ -0.19
RAB1A-202ENST00000409751 TOMM7Q9P0U1 55 aa13.83□□□□□ -0.2
RAB1A-202ENST00000409751 HSPB8Q9UJY1 196 aa13.83□□□□□ -0.2
RAB1A-202ENST00000409751 CHTOPQ9Y3Y2 248 aaKnown RBP13.83□□□□□ -0.2
RAB1A-202ENST00000409751 SYCNQ0VAF6 134 aa13.82□□□□□ -0.2
RAB1A-202ENST00000409751 IGLC3P0DOY3 106 aa13.81□□□□□ -0.2
RAB1A-202ENST00000409751 LINC01561Q8N1V8 128 aa13.81□□□□□ -0.2
RAB1A-202ENST00000409751 LRP1BQ9NZR2 4599 aa13.8□□□□□ -0.2
RAB1A-202ENST00000409751 PRSS2P07478 247 aa13.8□□□□□ -0.2
RAB1A-202ENST00000409751 H3BRM9 83 aa13.79□□□□□ -0.2
RAB1A-202ENST00000409751 SPINK8P0C7L1 97 aa13.79□□□□□ -0.2
RAB1A-202ENST00000409751 HAMPP81172 84 aa13.79□□□□□ -0.2
RAB1A-202ENST00000409751 Q6ZRU5 148 aa13.79□□□□□ -0.2
RAB1A-202ENST00000409751 C2orf48Q96LS8 159 aa13.79□□□□□ -0.2
RAB1A-202ENST00000409751 IGLV5-45A0A087WSX0 123 aa13.78□□□□□ -0.2
RAB1A-202ENST00000409751 TRAV12-1A0A0B4J245 112 aa13.78□□□□□ -0.2
RAB1A-202ENST00000409751 NDUFA1O15239 70 aa13.77□□□□□ -0.21
RAB1A-202ENST00000409751 TMEM170BQ5T4T1 132 aa13.77□□□□□ -0.21
RAB1A-202ENST00000409751 FAM30AQ9NZY2 134 aa13.77□□□□□ -0.21
RAB1A-202ENST00000409751 C11orf86A6NJI1 115 aa13.76□□□□□ -0.21
RAB1A-202ENST00000409751 SMIM1B2RUZ4 78 aa13.76□□□□□ -0.21
RAB1A-202ENST00000409751 ZNF22P17026 224 aaPredicted RBP13.76□□□□□ -0.21
RAB1A-202ENST00000409751 MRPL35Q9NZE8 188 aaKnown RBP13.76□□□□□ -0.21
RAB1A-202ENST00000409751 F8VRH5 84 aa13.75□□□□□ -0.21
RAB1A-202ENST00000409751 CDK2AP2O75956 126 aa13.75□□□□□ -0.21
RAB1A-202ENST00000409751 C6orf226Q5I0X4 101 aa13.75□□□□□ -0.21
RAB1A-202ENST00000409751 MAP1LC3CQ9BXW4 147 aa13.75□□□□□ -0.21
RAB1A-202ENST00000409751 CKS1BP61024 79 aa13.74□□□□□ -0.21
RAB1A-202ENST00000409751 KIAA0087Q14695 138 aa13.74□□□□□ -0.21
RAB1A-202ENST00000409751 COA6Q5JTJ3 125 aaKnown RBP13.74□□□□□ -0.21
RAB1A-202ENST00000409751 C2orf82Q6UX34 121 aa13.74□□□□□ -0.21
RAB1A-202ENST00000409751 Q8IZM0 81 aa13.74□□□□□ -0.21
RAB1A-202ENST00000409751 UNQ6190/PRO20217Q6UXQ8 127 aa13.73□□□□□ -0.21
RAB1A-202ENST00000409751 SDIM1Q6ZPB5 146 aa13.73□□□□□ -0.21
RAB1A-202ENST00000409751 F8WDY8 70 aa13.72□□□□□ -0.21
RAB1A-202ENST00000409751 ODF1Q14990 250 aa13.72□□□□□ -0.21
RAB1A-202ENST00000409751 COX7B2Q8TF08 81 aa13.72□□□□□ -0.21
RAB1A-202ENST00000409751 IGKV2-24A0A0C4DH68 120 aa13.71□□□□□ -0.21
RAB1A-202ENST00000409751 CHTF8P0CG12 524 aa13.71□□□□□ -0.21
RAB1A-202ENST00000409751 C10orf25Q5T742 122 aa13.71□□□□□ -0.21
RAB1A-202ENST00000409751 PKIGQ9Y2B9 76 aa13.71□□□□□ -0.21
RAB1A-202ENST00000409751 S100A6P06703 90 aa13.7□□□□□ -0.22
RAB1A-202ENST00000409751 XGP55808 180 aa13.7□□□□□ -0.22
RAB1A-202ENST00000409751 Q6ZSA8 131 aa13.7□□□□□ -0.22
RAB1A-202ENST00000409751 DPH3Q96FX2 82 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms