RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 RBM3P98179 157 aaKnown RBP12.16□□□□□ -0.46
PCDHA13-202ENST00000409494 IGKV2-24A0A0C4DH68 120 aa12.16□□□□□ -0.46
PCDHA13-202ENST00000409494 MT-ATP8P03928 68 aa12.16□□□□□ -0.46
PCDHA13-202ENST00000409494 C7orf33Q8WU49 177 aa12.16□□□□□ -0.46
PCDHA13-202ENST00000409494 PKD1L2Q7Z442 2459 aa12.16□□□□□ -0.46
PCDHA13-202ENST00000409494 F8WDY8 70 aa12.15□□□□□ -0.46
PCDHA13-202ENST00000409494 NREPQ16612 68 aa12.15□□□□□ -0.46
PCDHA13-202ENST00000409494 CSDC2Q9Y534 153 aaKnown RBP12.15□□□□□ -0.47
PCDHA13-202ENST00000409494 LINC00308Q8TCZ7 52 aa12.14□□□□□ -0.47
PCDHA13-202ENST00000409494 ATOX1O00244 68 aa12.14□□□□□ -0.47
PCDHA13-202ENST00000409494 CDC42SE2Q9NRR3 84 aa12.14□□□□□ -0.47
PCDHA13-202ENST00000409494 TEX49A0A1B0GTD5 131 aa12.14□□□□□ -0.47
PCDHA13-202ENST00000409494 A0A096LNJ9 63 aa12.13□□□□□ -0.47
PCDHA13-202ENST00000409494 IGKV3D-7A0A0C4DH55 119 aa12.13□□□□□ -0.47
PCDHA13-202ENST00000409494 TRBV30A0A0K0K1B3 111 aa12.13□□□□□ -0.47
PCDHA13-202ENST00000409494 Q8IZM0 81 aa12.13□□□□□ -0.47
PCDHA13-202ENST00000409494 NANOS2P60321 138 aaKnown RBP12.13□□□□□ -0.47
PCDHA13-202ENST00000409494 TRIAP1O43715 76 aa12.12□□□□□ -0.47
PCDHA13-202ENST00000409494 LOC107984640A0A0U1RRK4 108 aa12.12□□□□□ -0.47
PCDHA13-202ENST00000409494 UBE2D1P51668 147 aa12.12□□□□□ -0.47
PCDHA13-202ENST00000409494 FSHBP01225 129 aa12.12□□□□□ -0.47
PCDHA13-202ENST00000409494 LINC00643Q86TS7 51 aa12.11□□□□□ -0.47
PCDHA13-202ENST00000409494 KLK9Q2XQG4 91 aa12.1□□□□□ -0.47
PCDHA13-202ENST00000409494 TET2Q6N021 2002 aaPredicted RBP12.1□□□□□ -0.47
PCDHA13-202ENST00000409494 FHL3Q13643 280 aa12.1□□□□□ -0.47
PCDHA13-202ENST00000409494 A0A1B0GX51 115 aa12.1□□□□□ -0.47
PCDHA13-202ENST00000409494 IGIPA6NJ69 53 aa12.09□□□□□ -0.47
PCDHA13-202ENST00000409494 M0R378 163 aa12.09□□□□□ -0.47
PCDHA13-202ENST00000409494 LOC100131303A0A0U1RQF7 123 aa12.09□□□□□ -0.47
PCDHA13-202ENST00000409494 EDN2P20800 178 aa12.09□□□□□ -0.47
PCDHA13-202ENST00000409494 FHL2Q14192 279 aa12.09□□□□□ -0.47
PCDHA13-202ENST00000409494 SMIM20Q8N5G0 67 aa12.09□□□□□ -0.47
PCDHA13-202ENST00000409494 A0A087WZ39 114 aa12.08□□□□□ -0.48
PCDHA13-202ENST00000409494 ZNF706Q9Y5V0 76 aaPredicted RBP12.07□□□□□ -0.48
PCDHA13-202ENST00000409494 NDUFV3P56181 108 aaKnown RBP12.07□□□□□ -0.48
PCDHA13-202ENST00000409494 HIGD2AQ9BW72 106 aa12.07□□□□□ -0.48
PCDHA13-202ENST00000409494 A0A1B0GUV1 79 aa12.06□□□□□ -0.48
PCDHA13-202ENST00000409494 FAM19A1Q7Z5A9 133 aa12.06□□□□□ -0.48
PCDHA13-202ENST00000409494 UTRNP46939 3433 aa12.06□□□□□ -0.48
PCDHA13-202ENST00000409494 EPG5Q9HCE0 2579 aa12.06□□□□□ -0.48
PCDHA13-202ENST00000409494 EGFEM1PQ0D2K5 195 aa12.05□□□□□ -0.48
PCDHA13-202ENST00000409494 LINC01561Q8N1V8 128 aa12.05□□□□□ -0.48
PCDHA13-202ENST00000409494 A8MZ25 164 aa12.05□□□□□ -0.48
PCDHA13-202ENST00000409494 DHRS4-AS1Q9P1J3 65 aa12.05□□□□□ -0.48
PCDHA13-202ENST00000409494 C14orf132Q9NPU4 83 aa12.05□□□□□ -0.48
PCDHA13-202ENST00000409494 PCSK5Q92824 1860 aa12.04□□□□□ -0.48
PCDHA13-202ENST00000409494 LY6G6CO95867 125 aa12.04□□□□□ -0.48
PCDHA13-202ENST00000409494 IGLV2-18A0A075B6J9 118 aa12.03□□□□□ -0.48
PCDHA13-202ENST00000409494 NDUFS5O43920 106 aa12.02□□□□□ -0.48
PCDHA13-202ENST00000409494 PRB2P02812 416 aaPredicted RBP12.02□□□□□ -0.49
PCDHA13-202ENST00000409494 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.02□□□□□ -0.49
PCDHA13-202ENST00000409494 PRM2P04554 102 aa12.02□□□□□ -0.49
PCDHA13-202ENST00000409494 XAGE1AQ9HD64 81 aa12.02□□□□□ -0.49
PCDHA13-202ENST00000409494 LINC00242Q5T6M2 205 aa12.02□□□□□ -0.49
PCDHA13-202ENST00000409494 Q6ZTC4 211 aa12.02□□□□□ -0.49
PCDHA13-202ENST00000409494 TRAV23DV6A0A075B6W5 121 aa12.01□□□□□ -0.49
PCDHA13-202ENST00000409494 MP68P56378 58 aa12□□□□□ -0.49
PCDHA13-202ENST00000409494 LST1O00453 97 aa11.99□□□□□ -0.49
PCDHA13-202ENST00000409494 FAM19A5Q7Z5A7 132 aaPredicted RBP11.99□□□□□ -0.49
PCDHA13-202ENST00000409494 RETNQ9HD89 108 aa11.98□□□□□ -0.49
PCDHA13-202ENST00000409494 PCNTO95613 3336 aa11.98□□□□□ -0.49
PCDHA13-202ENST00000409494 MTORP42345 2549 aa11.98□□□□□ -0.49
PCDHA13-202ENST00000409494 AMELXQ99217 191 aa11.98□□□□□ -0.49
PCDHA13-202ENST00000409494 C6orf99Q4VX62 202 aa11.97□□□□□ -0.49
PCDHA13-202ENST00000409494 ANKRD17O75179 2603 aaKnown RBP11.97□□□□□ -0.49
PCDHA13-202ENST00000409494 CYSRT1A8MQ03 144 aa11.97□□□□□ -0.49
PCDHA13-202ENST00000409494 SETD2Q9BYW2 2564 aaPredicted RBP11.97□□□□□ -0.49
PCDHA13-202ENST00000409494 XGP55808 180 aa11.97□□□□□ -0.49
PCDHA13-202ENST00000409494 C2orf48Q96LS8 159 aa11.97□□□□□ -0.49
PCDHA13-202ENST00000409494 H3BNG1 76 aa11.96□□□□□ -0.49
PCDHA13-202ENST00000409494 FAM19A4Q96LR4 140 aa11.95□□□□□ -0.5
PCDHA13-202ENST00000409494 J3KT08 172 aa11.95□□□□□ -0.5
PCDHA13-202ENST00000409494 POM121L12Q8N7R1 296 aa11.94□□□□□ -0.5
PCDHA13-202ENST00000409494 TSPEAR-AS2P59090 65 aa11.94□□□□□ -0.5
PCDHA13-202ENST00000409494 ATP5EP2Q5VTU8 51 aa11.94□□□□□ -0.5
PCDHA13-202ENST00000409494 M0R2N4 97 aa11.94□□□□□ -0.5
PCDHA13-202ENST00000409494 LYPD5Q6UWN5 251 aa11.94□□□□□ -0.5
PCDHA13-202ENST00000409494 SMIM1B2RUZ4 78 aa11.93□□□□□ -0.5
PCDHA13-202ENST00000409494 C11orf72Q8NBR9 251 aa11.93□□□□□ -0.5
PCDHA13-202ENST00000409494 KRTAP24-1Q3LI83 254 aa11.92□□□□□ -0.5
PCDHA13-202ENST00000409494 UQCRQO14949 82 aa11.92□□□□□ -0.5
PCDHA13-202ENST00000409494 WFDC9Q8NEX5 89 aa11.92□□□□□ -0.5
PCDHA13-202ENST00000409494 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.92□□□□□ -0.5
PCDHA13-202ENST00000409494 BPY2O14599 106 aa11.91□□□□□ -0.5
PCDHA13-202ENST00000409494 SDIM1Q6ZPB5 146 aa11.91□□□□□ -0.5
PCDHA13-202ENST00000409494 KIF25-AS1Q9Y6Z4 181 aa11.91□□□□□ -0.5
PCDHA13-202ENST00000409494 SLPIP03973 132 aa11.91□□□□□ -0.5
PCDHA13-202ENST00000409494 TMEM258P61165 79 aa11.89□□□□□ -0.51
PCDHA13-202ENST00000409494 LINC01546A6NGU7 62 aa11.89□□□□□ -0.51
PCDHA13-202ENST00000409494 IMUPQ9GZP8 106 aa11.89□□□□□ -0.51
PCDHA13-202ENST00000409494 ZNF73O43830 326 aaPredicted RBP11.89□□□□□ -0.51
PCDHA13-202ENST00000409494 IGLV4-60A0A075B6I1 120 aa11.88□□□□□ -0.51
PCDHA13-202ENST00000409494 PRRC2CQ9Y520 2896 aaKnown RBP11.88□□□□□ -0.51
PCDHA13-202ENST00000409494 AGRNO00468 2067 aa11.87□□□□□ -0.51
PCDHA13-202ENST00000409494 H0Y9J4 135 aa11.87□□□□□ -0.51
PCDHA13-202ENST00000409494 USP17L23D6RBM5 183 aa11.87□□□□□ -0.51
PCDHA13-202ENST00000409494 RPL28P46779 137 aaKnown RBP11.87□□□□□ -0.51
PCDHA13-202ENST00000409494 C1orf134Q5TEV5 83 aa11.87□□□□□ -0.51
PCDHA13-202ENST00000409494 COL27A1Q8IZC6 1860 aaPredicted RBP11.86□□□□□ -0.51
PCDHA13-202ENST00000409494 UNQ6190/PRO20217Q6UXQ8 127 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms