RNA–Protein interactions for RNA: ENST00000409190.7

SYNC-202, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SYNC, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-202ENST00000409190 TIRAPP58753 221 aa12.01□□□□□ -0.49
SYNC-202ENST00000409190 DNAJC30Q96LL9 226 aa12.01□□□□□ -0.49
SYNC-202ENST00000409190 FAM218AQ96MZ4 157 aa12□□□□□ -0.49
SYNC-202ENST00000409190 CR1P17927 2039 aa12□□□□□ -0.49
SYNC-202ENST00000409190 LINC00158P58513 81 aa11.99□□□□□ -0.49
SYNC-202ENST00000409190 DAZ2Q13117 558 aaKnown RBP11.99□□□□□ -0.49
SYNC-202ENST00000409190 BEAN1Q3B7T3 259 aa11.99□□□□□ -0.49
SYNC-202ENST00000409190 HIST2H2BCQ6DN03 193 aa11.99□□□□□ -0.49
SYNC-202ENST00000409190 DAZ4Q86SG3 579 aaKnown RBP11.99□□□□□ -0.49
SYNC-202ENST00000409190 DAZ3Q9NR90 486 aaKnown RBP11.99□□□□□ -0.49
SYNC-202ENST00000409190 BAALC-AS2P0C853 105 aa11.99□□□□□ -0.49
SYNC-202ENST00000409190 C5orf38Q86SI9 138 aa11.99□□□□□ -0.49
SYNC-202ENST00000409190 CLPSL2Q6UWE3 100 aa11.99□□□□□ -0.49
SYNC-202ENST00000409190 MIR7-3HGQ8N6C7 128 aa11.99□□□□□ -0.49
SYNC-202ENST00000409190 EDA2RQ9HAV5 297 aa11.99□□□□□ -0.49
SYNC-202ENST00000409190 CDC42SE2Q9NRR3 84 aa11.98□□□□□ -0.49
SYNC-202ENST00000409190 A0A096LPF7 62 aa11.98□□□□□ -0.49
SYNC-202ENST00000409190 TRGV4A0A0C4DH28 118 aa11.98□□□□□ -0.49
SYNC-202ENST00000409190 COX7A2LO14548 114 aa11.98□□□□□ -0.49
SYNC-202ENST00000409190 M0QXV9 152 aa11.97□□□□□ -0.49
SYNC-202ENST00000409190 CCL24O00175 119 aa11.97□□□□□ -0.49
SYNC-202ENST00000409190 ATP5G1P05496 136 aa11.97□□□□□ -0.49
SYNC-202ENST00000409190 IGLV5-39A0A0G2JS06 123 aa11.96□□□□□ -0.49
SYNC-202ENST00000409190 DEFB130BP0DP73 79 aa11.96□□□□□ -0.49
SYNC-202ENST00000409190 DEFB130AP0DP74 79 aa11.96□□□□□ -0.49
SYNC-202ENST00000409190 GAGE2AQ6NT46 116 aa11.96□□□□□ -0.49
SYNC-202ENST00000409190 OR13C6PQ8NH95 151 aa11.96□□□□□ -0.49
SYNC-202ENST00000409190 TMEM243Q9BU79 118 aa11.96□□□□□ -0.49
SYNC-202ENST00000409190 RNF152Q8N8N0 203 aa11.96□□□□□ -0.49
SYNC-202ENST00000409190 IGLV5-45A0A087WSX0 123 aa11.96□□□□□ -0.5
SYNC-202ENST00000409190 FAM236AA0A1B0GUQ0 79 aa11.95□□□□□ -0.5
SYNC-202ENST00000409190 FAM236BA0A1B0GV22 79 aa11.95□□□□□ -0.5
SYNC-202ENST00000409190 SMIM20Q8N5G0 67 aa11.95□□□□□ -0.5
SYNC-202ENST00000409190 ITPR2Q14571 2701 aa11.95□□□□□ -0.5
SYNC-202ENST00000409190 TIMM17BO60830 172 aa11.95□□□□□ -0.5
SYNC-202ENST00000409190 BBC3Q96PG8 261 aaPredicted RBP11.95□□□□□ -0.5
SYNC-202ENST00000409190 IGLV4-60A0A075B6I1 120 aa11.95□□□□□ -0.5
SYNC-202ENST00000409190 SHISA2Q6UWI4 295 aa11.95□□□□□ -0.5
SYNC-202ENST00000409190 A8MTW9 85 aa11.94□□□□□ -0.5
SYNC-202ENST00000409190 CRPP02741 224 aa11.93□□□□□ -0.5
SYNC-202ENST00000409190 SMCR5Q8TEV8 140 aa11.93□□□□□ -0.5
SYNC-202ENST00000409190 SND1-IT1Q9HBX3 110 aa11.93□□□□□ -0.5
SYNC-202ENST00000409190 F5H768 121 aa11.93□□□□□ -0.5
SYNC-202ENST00000409190 FSHBP01225 129 aa11.93□□□□□ -0.5
SYNC-202ENST00000409190 WFDC11Q8NEX6 87 aa11.93□□□□□ -0.5
SYNC-202ENST00000409190 HERV-K104P63124 156 aa11.92□□□□□ -0.5
SYNC-202ENST00000409190 LINC00337Q8N6G1 96 aa11.92□□□□□ -0.5
SYNC-202ENST00000409190 DNAJC9-AS1A6NH13 148 aa11.92□□□□□ -0.5
SYNC-202ENST00000409190 DEFB113Q30KQ7 82 aa11.92□□□□□ -0.5
SYNC-202ENST00000409190 PAX4O43316 350 aa11.91□□□□□ -0.5
SYNC-202ENST00000409190 SLPIP03973 132 aa11.91□□□□□ -0.5
SYNC-202ENST00000409190 COX7B2Q8TF08 81 aa11.9□□□□□ -0.5
SYNC-202ENST00000409190 XCL1P47992 114 aa11.9□□□□□ -0.51
SYNC-202ENST00000409190 ESM1Q9NQ30 184 aa11.9□□□□□ -0.51
SYNC-202ENST00000409190 C9orf129Q5T035 196 aaKnown RBP11.89□□□□□ -0.51
SYNC-202ENST00000409190 A0A087WYN8 130 aa11.89□□□□□ -0.51
SYNC-202ENST00000409190 DNAL4O96015 105 aa11.89□□□□□ -0.51
SYNC-202ENST00000409190 C14orf132Q9NPU4 83 aa11.88□□□□□ -0.51
SYNC-202ENST00000409190 UBR5O95071 2799 aaPredicted RBP11.87□□□□□ -0.51
SYNC-202ENST00000409190 TRBV10-1A0A0K0K1A3 114 aa11.87□□□□□ -0.51
SYNC-202ENST00000409190 GIG44P09565 113 aaPredicted RBP11.87□□□□□ -0.51
SYNC-202ENST00000409190 FASNP49327 2511 aaKnown RBP11.87□□□□□ -0.51
SYNC-202ENST00000409190 RNASE1P07998 156 aaKnown RBP11.86□□□□□ -0.51
SYNC-202ENST00000409190 SMIM11BQ8TCY0 68 aa11.86□□□□□ -0.51
SYNC-202ENST00000409190 IGKV2-28A0A075B6P5 120 aa11.86□□□□□ -0.51
SYNC-202ENST00000409190 IGKV2D-28P01615 120 aa11.86□□□□□ -0.51
SYNC-202ENST00000409190 VWFP04275 2813 aa11.86□□□□□ -0.51
SYNC-202ENST00000409190 PRR3P79522 188 aaKnown RBP11.85□□□□□ -0.51
SYNC-202ENST00000409190 LECT2O14960 151 aa11.85□□□□□ -0.51
SYNC-202ENST00000409190 CCL18P55774 89 aa11.85□□□□□ -0.51
SYNC-202ENST00000409190 CFAP161Q6P656 301 aa11.85□□□□□ -0.51
SYNC-202ENST00000409190 C6orf226Q5I0X4 101 aa11.85□□□□□ -0.51
SYNC-202ENST00000409190 COPS9Q8WXC6 57 aa11.85□□□□□ -0.51
SYNC-202ENST00000409190 DEFB4AO15263 64 aa11.84□□□□□ -0.51
SYNC-202ENST00000409190 Q6Q795 121 aa11.84□□□□□ -0.51
SYNC-202ENST00000409190 IGKV3D-7A0A0C4DH55 119 aa11.84□□□□□ -0.51
SYNC-202ENST00000409190 IGLV10-54A0A075B6I4 117 aa11.83□□□□□ -0.52
SYNC-202ENST00000409190 MALP21145 153 aa11.83□□□□□ -0.52
SYNC-202ENST00000409190 TRAV13-2A0A0B4J235 113 aa11.82□□□□□ -0.52
SYNC-202ENST00000409190 SDIM1Q6ZPB5 146 aa11.82□□□□□ -0.52
SYNC-202ENST00000409190 IL17DQ8TAD2 202 aa11.82□□□□□ -0.52
SYNC-202ENST00000409190 CSDC2Q9Y534 153 aaKnown RBP11.82□□□□□ -0.52
SYNC-202ENST00000409190 FAM240AA0A1B0GVK7 77 aa11.82□□□□□ -0.52
SYNC-202ENST00000409190 PLAC8L1A1L4L8 177 aa11.82□□□□□ -0.52
SYNC-202ENST00000409190 NCR3O14931 201 aa11.82□□□□□ -0.52
SYNC-202ENST00000409190 C22orf24Q9Y442 160 aa11.82□□□□□ -0.52
SYNC-202ENST00000409190 HELZ2Q9BYK8 2649 aaKnown RBP11.81□□□□□ -0.52
SYNC-202ENST00000409190 HECTD1Q9ULT8 2610 aa11.81□□□□□ -0.52
SYNC-202ENST00000409190 TRBV6-8A0A0A6YYG3 113 aa11.81□□□□□ -0.52
SYNC-202ENST00000409190 TRACP01848 142 aa11.81□□□□□ -0.52
SYNC-202ENST00000409190 DEFB121Q5J5C9 76 aa11.81□□□□□ -0.52
SYNC-202ENST00000409190 LINC01600Q96MT4 127 aa11.81□□□□□ -0.52
SYNC-202ENST00000409190 ZNF843Q8N446 348 aa11.81□□□□□ -0.52
SYNC-202ENST00000409190 C16orf74Q96GX8 76 aa11.8□□□□□ -0.52
SYNC-202ENST00000409190 GYPEP15421 78 aa11.79□□□□□ -0.52
SYNC-202ENST00000409190 Q8N3U1 123 aa11.79□□□□□ -0.52
SYNC-202ENST00000409190 LINC01006Q8NI28 216 aa11.79□□□□□ -0.52
SYNC-202ENST00000409190 FHL2Q14192 279 aa11.78□□□□□ -0.52
SYNC-202ENST00000409190 IGHV3OR16-9A0A0B4J2B5 98 aa11.78□□□□□ -0.52
SYNC-202ENST00000409190 KLK5Q9Y337 293 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms