RNA–Protein interactions for RNA: ENST00000407540.7

MATN3-201, Transcript of matrilin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene MATN3, Length 2,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATN3-201ENST00000407540 TMEM126AQ9H061 195 aa12.24□□□□□ -0.45
MATN3-201ENST00000407540 SPANXDQ9BXN6 97 aa12.23□□□□□ -0.45
MATN3-201ENST00000407540 Q9H8V8 135 aa12.23□□□□□ -0.45
MATN3-201ENST00000407540 SPANXCQ9NY87 97 aa12.23□□□□□ -0.45
MATN3-201ENST00000407540 TRAV8-4A0A0B4J246 113 aa12.22□□□□□ -0.45
MATN3-201ENST00000407540 TRAV25A0A0B4J276 109 aa12.22□□□□□ -0.45
MATN3-201ENST00000407540 RPL36AP83881 106 aaKnown RBP12.22□□□□□ -0.45
MATN3-201ENST00000407540 RPL36ALQ969Q0 106 aaKnown RBP12.22□□□□□ -0.45
MATN3-201ENST00000407540 HELZ2Q9BYK8 2649 aaKnown RBP12.22□□□□□ -0.45
MATN3-201ENST00000407540 CLEC2BQ92478 149 aa12.22□□□□□ -0.45
MATN3-201ENST00000407540 PLAC8L1A1L4L8 177 aa12.21□□□□□ -0.45
MATN3-201ENST00000407540 TIRAPP58753 221 aa12.21□□□□□ -0.45
MATN3-201ENST00000407540 ICOSQ9Y6W8 199 aa12.21□□□□□ -0.45
MATN3-201ENST00000407540 GCN1Q92616 2671 aaKnown RBP12.21□□□□□ -0.45
MATN3-201ENST00000407540 IGLV5-45A0A087WSX0 123 aa12.2□□□□□ -0.46
MATN3-201ENST00000407540 LINC01620Q4KN68 170 aa12.2□□□□□ -0.46
MATN3-201ENST00000407540 TRGV2A0A075B6R0 118 aa12.2□□□□□ -0.46
MATN3-201ENST00000407540 C5orf47Q569G3 176 aa12.2□□□□□ -0.46
MATN3-201ENST00000407540 VWFP04275 2813 aa12.2□□□□□ -0.46
MATN3-201ENST00000407540 IGKV3OR2-268A0A0C4DH90 116 aa12.19□□□□□ -0.46
MATN3-201ENST00000407540 LOC107984640A0A0U1RRK4 108 aa12.19□□□□□ -0.46
MATN3-201ENST00000407540 FASNP49327 2511 aaKnown RBP12.19□□□□□ -0.46
MATN3-201ENST00000407540 TRBV30A0A0K0K1B3 111 aa12.19□□□□□ -0.46
MATN3-201ENST00000407540 SMIM1B2RUZ4 78 aa12.19□□□□□ -0.46
MATN3-201ENST00000407540 NDUFA1O15239 70 aa12.19□□□□□ -0.46
MATN3-201ENST00000407540 ATXN8Q156A1 80 aa12.19□□□□□ -0.46
MATN3-201ENST00000407540 C19orf73Q9NVV2 129 aa12.18□□□□□ -0.46
MATN3-201ENST00000407540 RPL13AP40429 203 aaKnown RBP12.18□□□□□ -0.46
MATN3-201ENST00000407540 SMR3AQ99954 134 aa12.18□□□□□ -0.46
MATN3-201ENST00000407540 CDC42SE2Q9NRR3 84 aa12.18□□□□□ -0.46
MATN3-201ENST00000407540 SOSTDC1Q6X4U4 206 aa12.17□□□□□ -0.46
MATN3-201ENST00000407540 NOTCH2Q04721 2471 aa12.17□□□□□ -0.46
MATN3-201ENST00000407540 UNC79Q9P2D8 2635 aa12.17□□□□□ -0.46
MATN3-201ENST00000407540 IGLV5-39A0A0G2JS06 123 aa12.17□□□□□ -0.46
MATN3-201ENST00000407540 HERVK_113P63121 156 aa12.17□□□□□ -0.46
MATN3-201ENST00000407540 DAZ2Q13117 558 aaKnown RBP12.16□□□□□ -0.46
MATN3-201ENST00000407540 DAZ4Q86SG3 579 aaKnown RBP12.16□□□□□ -0.46
MATN3-201ENST00000407540 DAZ3Q9NR90 486 aaKnown RBP12.16□□□□□ -0.46
MATN3-201ENST00000407540 TRBV10-1A0A0K0K1A3 114 aa12.15□□□□□ -0.46
MATN3-201ENST00000407540 LINC00308Q8TCZ7 52 aa12.15□□□□□ -0.46
MATN3-201ENST00000407540 F5H768 121 aa12.14□□□□□ -0.47
MATN3-201ENST00000407540 IGLV1-51P01701 117 aa12.14□□□□□ -0.47
MATN3-201ENST00000407540 CSNK1G2-AS1Q8NCQ2 148 aa12.14□□□□□ -0.47
MATN3-201ENST00000407540 H7C423 109 aa12.14□□□□□ -0.47
MATN3-201ENST00000407540 PRIMA1Q86XR5 153 aa12.14□□□□□ -0.47
MATN3-201ENST00000407540 UBE2L6O14933 153 aa12.13□□□□□ -0.47
MATN3-201ENST00000407540 UBE2WQ96B02 151 aa12.13□□□□□ -0.47
MATN3-201ENST00000407540 SMIM9A6NGZ8 99 aa12.13□□□□□ -0.47
MATN3-201ENST00000407540 TRGV4A0A0C4DH28 118 aa12.12□□□□□ -0.47
MATN3-201ENST00000407540 RNASE1P07998 156 aaKnown RBP12.12□□□□□ -0.47
MATN3-201ENST00000407540 TMEM243Q9BU79 118 aa12.12□□□□□ -0.47
MATN3-201ENST00000407540 HIVEP2P31629 2446 aa12.12□□□□□ -0.47
MATN3-201ENST00000407540 IGLV4-60A0A075B6I1 120 aa12.12□□□□□ -0.47
MATN3-201ENST00000407540 TRBV10-2A0A0K0K1G8 114 aa12.12□□□□□ -0.47
MATN3-201ENST00000407540 TIMM17BO60830 172 aa12.12□□□□□ -0.47
MATN3-201ENST00000407540 LINC01600Q96MT4 127 aa12.12□□□□□ -0.47
MATN3-201ENST00000407540 CIRBPQ14011 172 aaKnown RBP12.11□□□□□ -0.47
MATN3-201ENST00000407540 MRPL23Q16540 153 aaKnown RBP12.11□□□□□ -0.47
MATN3-201ENST00000407540 C2orf82Q6UX34 121 aa12.11□□□□□ -0.47
MATN3-201ENST00000407540 C16orf74Q96GX8 76 aa12.11□□□□□ -0.47
MATN3-201ENST00000407540 HECTD1Q9ULT8 2610 aa12.11□□□□□ -0.47
MATN3-201ENST00000407540 TRBV7-7A0A0K0K1E9 115 aa12.1□□□□□ -0.47
MATN3-201ENST00000407540 DEFB130BP0DP73 79 aa12.1□□□□□ -0.47
MATN3-201ENST00000407540 DEFB130AP0DP74 79 aa12.1□□□□□ -0.47
MATN3-201ENST00000407540 KRTAP10-3P60369 221 aa12.1□□□□□ -0.47
MATN3-201ENST00000407540 KLK5Q9Y337 293 aaPredicted RBP12.1□□□□□ -0.47
MATN3-201ENST00000407540 FAM236AA0A1B0GUQ0 79 aa12.1□□□□□ -0.47
MATN3-201ENST00000407540 FAM236BA0A1B0GV22 79 aa12.1□□□□□ -0.47
MATN3-201ENST00000407540 FAM19A5Q7Z5A7 132 aaPredicted RBP12.09□□□□□ -0.47
MATN3-201ENST00000407540 TOMM7Q9P0U1 55 aa12.09□□□□□ -0.47
MATN3-201ENST00000407540 COX6CP09669 75 aa12.09□□□□□ -0.47
MATN3-201ENST00000407540 SPATA3Q8NHX4 192 aa12.09□□□□□ -0.47
MATN3-201ENST00000407540 C16orf95Q9H693 158 aa12.09□□□□□ -0.47
MATN3-201ENST00000407540 FHL2Q14192 279 aa12.08□□□□□ -0.48
MATN3-201ENST00000407540 C9orf153Q5TBE3 101 aa12.08□□□□□ -0.48
MATN3-201ENST00000407540 FAM19A3Q7Z5A8 133 aa12.08□□□□□ -0.48
MATN3-201ENST00000407540 LST1O00453 97 aa12.07□□□□□ -0.48
MATN3-201ENST00000407540 OTOGQ6ZRI0 2925 aa12.07□□□□□ -0.48
MATN3-201ENST00000407540 TRBV6-4A0A1B0GX49 114 aa12.06□□□□□ -0.48
MATN3-201ENST00000407540 OVOL2Q9BRP0 275 aa12.06□□□□□ -0.48
MATN3-201ENST00000407540 A0A096LPF7 62 aa12.05□□□□□ -0.48
MATN3-201ENST00000407540 C3orf22Q8N5N4 141 aa12.05□□□□□ -0.48
MATN3-201ENST00000407540 TENM1Q9UKZ4 2725 aa12.05□□□□□ -0.48
MATN3-201ENST00000407540 TRRAPQ9Y4A5 3859 aa12.05□□□□□ -0.48
MATN3-201ENST00000407540 TRBV6-8A0A0A6YYG3 113 aa12.04□□□□□ -0.48
MATN3-201ENST00000407540 FAM240AA0A1B0GVK7 77 aa12.04□□□□□ -0.48
MATN3-201ENST00000407540 C5orf38Q86SI9 138 aa12.04□□□□□ -0.48
MATN3-201ENST00000407540 J3KT08 172 aa12.03□□□□□ -0.48
MATN3-201ENST00000407540 HILS1P60008 231 aa12.03□□□□□ -0.48
MATN3-201ENST00000407540 WIPF1O43516 503 aa12.03□□□□□ -0.48
MATN3-201ENST00000407540 C11orf68Q9H3H3 251 aaKnown RBP12.02□□□□□ -0.48
MATN3-201ENST00000407540 CMC4P56277 68 aaPredicted RBP12.01□□□□□ -0.49
MATN3-201ENST00000407540 CLPSL2Q6UWE3 100 aa12.01□□□□□ -0.49
MATN3-201ENST00000407540 MIR7-3HGQ8N6C7 128 aa12.01□□□□□ -0.49
MATN3-201ENST00000407540 LINC00482Q8N8I6 264 aa12.01□□□□□ -0.49
MATN3-201ENST00000407540 COX7B2Q8TF08 81 aa12.01□□□□□ -0.49
MATN3-201ENST00000407540 DEFB4AO15263 64 aa12.01□□□□□ -0.49
MATN3-201ENST00000407540 UQCRQO14949 82 aa12□□□□□ -0.49
MATN3-201ENST00000407540 LINC00526Q96FQ7 95 aa12□□□□□ -0.49
MATN3-201ENST00000407540 FAM218AQ96MZ4 157 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms