RNA–Protein interactions for RNA: ENST00000406246.7

RELA-202, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RELA, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-202ENST00000406246 DEFB131BA0A096LNP1 70 aa13.05□□□□□ -0.32
RELA-202ENST00000406246 LURAP1LQ8IV03 231 aa13.05□□□□□ -0.32
RELA-202ENST00000406246 LINC00269Q8N2A0 174 aa13.05□□□□□ -0.32
RELA-202ENST00000406246 TIRAPP58753 221 aa13.04□□□□□ -0.32
RELA-202ENST00000406246 HERVK_113P63121 156 aa13.04□□□□□ -0.32
RELA-202ENST00000406246 ZNF625Q96I27 306 aaPredicted RBP13.04□□□□□ -0.32
RELA-202ENST00000406246 TEX48A0A1B0GUV7 120 aa13.04□□□□□ -0.32
RELA-202ENST00000406246 C5orf38Q86SI9 138 aa13.04□□□□□ -0.32
RELA-202ENST00000406246 LYSTQ99698 3801 aa13.03□□□□□ -0.32
RELA-202ENST00000406246 ANGP03950 147 aaKnown RBP13.03□□□□□ -0.32
RELA-202ENST00000406246 XCL1P47992 114 aa13.03□□□□□ -0.32
RELA-202ENST00000406246 TENM2Q9NT68 2774 aa13.03□□□□□ -0.32
RELA-202ENST00000406246 IGLV5-45A0A087WSX0 123 aa13.03□□□□□ -0.32
RELA-202ENST00000406246 TAX1BP3O14907 124 aa13.03□□□□□ -0.32
RELA-202ENST00000406246 PTTG1IPP53801 180 aa13.03□□□□□ -0.32
RELA-202ENST00000406246 SMAGPQ0VAQ4 97 aa13.03□□□□□ -0.32
RELA-202ENST00000406246 SRSF9Q13242 221 aaKnown RBP eCLIP13.03□□□□□ -0.32
RELA-202ENST00000406246 LYPD5Q6UWN5 251 aa13.03□□□□□ -0.32
RELA-202ENST00000406246 CEND1Q8N111 149 aa13.03□□□□□ -0.32
RELA-202ENST00000406246 MEGF8Q7Z7M0 2845 aa13.03□□□□□ -0.32
RELA-202ENST00000406246 SMIM1B2RUZ4 78 aa13.02□□□□□ -0.32
RELA-202ENST00000406246 LINC00959A0A1B0GUT2 108 aa13.02□□□□□ -0.33
RELA-202ENST00000406246 NDUFA12Q9UI09 145 aa13.02□□□□□ -0.33
RELA-202ENST00000406246 NHP2Q9NX24 153 aaKnown RBP13.01□□□□□ -0.33
RELA-202ENST00000406246 A0A0U1RRA0 63 aa13.01□□□□□ -0.33
RELA-202ENST00000406246 H3BRM9 83 aa13.01□□□□□ -0.33
RELA-202ENST00000406246 PRKDCP78527 4128 aaKnown RBP13.01□□□□□ -0.33
RELA-202ENST00000406246 IGHV3-30P01768 117 aa13□□□□□ -0.33
RELA-202ENST00000406246 IGHV3-33P01772 117 aa13□□□□□ -0.33
RELA-202ENST00000406246 IGHV3-30-5P0DP03 117 aa13□□□□□ -0.33
RELA-202ENST00000406246 CCL25O15444 150 aa13□□□□□ -0.33
RELA-202ENST00000406246 NPC2P61916 151 aa13□□□□□ -0.33
RELA-202ENST00000406246 WFDC10BQ8IUB3 73 aa13□□□□□ -0.33
RELA-202ENST00000406246 A0A0J9YXY3 114 aa12.99□□□□□ -0.33
RELA-202ENST00000406246 TOMM7Q9P0U1 55 aa12.99□□□□□ -0.33
RELA-202ENST00000406246 DAND5Q8N907 189 aa12.99□□□□□ -0.33
RELA-202ENST00000406246 A0A1B0GUV1 79 aa12.98□□□□□ -0.33
RELA-202ENST00000406246 LELP1Q5T871 98 aa12.98□□□□□ -0.33
RELA-202ENST00000406246 FAM19A3Q7Z5A8 133 aa12.98□□□□□ -0.33
RELA-202ENST00000406246 SEC11AP67812 179 aa12.97□□□□□ -0.33
RELA-202ENST00000406246 ESRGQ1W209 222 aa12.97□□□□□ -0.33
RELA-202ENST00000406246 ADAMTSL4-AS1Q5T5F5 129 aa12.97□□□□□ -0.33
RELA-202ENST00000406246 KLK12Q9UKR0 248 aa12.97□□□□□ -0.33
RELA-202ENST00000406246 IGHV3OR16-9A0A0B4J2B5 98 aa12.97□□□□□ -0.33
RELA-202ENST00000406246 TM2D2Q9BX73 214 aa12.97□□□□□ -0.33
RELA-202ENST00000406246 IGLV5-39A0A0G2JS06 123 aa12.96□□□□□ -0.33
RELA-202ENST00000406246 Q9H8V8 135 aa12.96□□□□□ -0.33
RELA-202ENST00000406246 COX11Q9Y6N1 276 aa12.96□□□□□ -0.33
RELA-202ENST00000406246 CSMD3Q7Z407 3707 aa12.95□□□□□ -0.34
RELA-202ENST00000406246 REG3AQ06141 175 aa12.95□□□□□ -0.34
RELA-202ENST00000406246 A6NDN8 102 aa12.95□□□□□ -0.34
RELA-202ENST00000406246 ZFAND6Q6FIF0 208 aa12.95□□□□□ -0.34
RELA-202ENST00000406246 EIF4EBP3O60516 100 aaPredicted RBP12.93□□□□□ -0.34
RELA-202ENST00000406246 SS18Q15532 418 aa12.93□□□□□ -0.34
RELA-202ENST00000406246 PRSS2P07478 247 aa12.92□□□□□ -0.34
RELA-202ENST00000406246 LITAFQ99732 161 aa12.92□□□□□ -0.34
RELA-202ENST00000406246 H3BUT2 72 aa12.92□□□□□ -0.34
RELA-202ENST00000406246 APOMO95445 188 aa12.91□□□□□ -0.34
RELA-202ENST00000406246 TAL2Q16559 108 aa12.91□□□□□ -0.34
RELA-202ENST00000406246 SH2D6Q7Z4S9 175 aa12.91□□□□□ -0.34
RELA-202ENST00000406246 CHCHD10Q8WYQ3 142 aaPredicted RBP12.91□□□□□ -0.34
RELA-202ENST00000406246 MUSTN1Q8IVN3 82 aa12.91□□□□□ -0.34
RELA-202ENST00000406246 SMIM13P0DJ93 91 aa12.9□□□□□ -0.34
RELA-202ENST00000406246 IGLL5B9A064 214 aa12.9□□□□□ -0.34
RELA-202ENST00000406246 A0A087WZ39 114 aa12.89□□□□□ -0.35
RELA-202ENST00000406246 H3BNG1 76 aa12.89□□□□□ -0.35
RELA-202ENST00000406246 NDUFA1O15239 70 aa12.89□□□□□ -0.35
RELA-202ENST00000406246 SFTA2Q6UW10 78 aa12.89□□□□□ -0.35
RELA-202ENST00000406246 UBE2WQ96B02 151 aa12.89□□□□□ -0.35
RELA-202ENST00000406246 TRAV10A0A0B4J240 114 aa12.89□□□□□ -0.35
RELA-202ENST00000406246 ENHOQ6UWT2 76 aa12.89□□□□□ -0.35
RELA-202ENST00000406246 COX7B2Q8TF08 81 aa12.89□□□□□ -0.35
RELA-202ENST00000406246 VAMP3Q15836 100 aa12.88□□□□□ -0.35
RELA-202ENST00000406246 SPANXB1Q9NS25 103 aaPredicted RBP12.88□□□□□ -0.35
RELA-202ENST00000406246 LINC00526Q96FQ7 95 aa12.87□□□□□ -0.35
RELA-202ENST00000406246 C2orf82Q6UX34 121 aa12.87□□□□□ -0.35
RELA-202ENST00000406246 A4D1N5 150 aa12.86□□□□□ -0.35
RELA-202ENST00000406246 TMEM238C9JI98 176 aa12.86□□□□□ -0.35
RELA-202ENST00000406246 MEIG1Q5JSS6 88 aa12.85□□□□□ -0.35
RELA-202ENST00000406246 GAGE12HA6NDE8 117 aa12.84□□□□□ -0.35
RELA-202ENST00000406246 C9orf118A6NHY6 69 aa12.84□□□□□ -0.35
RELA-202ENST00000406246 DNAH7Q8WXX0 4024 aa12.84□□□□□ -0.35
RELA-202ENST00000406246 CFC1BP0CG36 223 aa12.83□□□□□ -0.35
RELA-202ENST00000406246 CFC1P0CG37 223 aa12.83□□□□□ -0.35
RELA-202ENST00000406246 B9D2Q9BPU9 175 aa12.83□□□□□ -0.35
RELA-202ENST00000406246 TGP01266 2768 aa12.83□□□□□ -0.36
RELA-202ENST00000406246 CD164L2Q6UWJ8 174 aa12.83□□□□□ -0.36
RELA-202ENST00000406246 FOXI1Q12951 378 aa12.82□□□□□ -0.36
RELA-202ENST00000406246 COX7A2LO14548 114 aa12.82□□□□□ -0.36
RELA-202ENST00000406246 C6orf226Q5I0X4 101 aa12.82□□□□□ -0.36
RELA-202ENST00000406246 PRR34Q9NV39 138 aa12.82□□□□□ -0.36
RELA-202ENST00000406246 LINC00588Q9Y4M8 146 aa12.82□□□□□ -0.36
RELA-202ENST00000406246 H7C2G1 150 aa12.81□□□□□ -0.36
RELA-202ENST00000406246 CRPP02741 224 aa12.81□□□□□ -0.36
RELA-202ENST00000406246 MALP21145 153 aa12.81□□□□□ -0.36
RELA-202ENST00000406246 PFN2P35080 140 aa12.81□□□□□ -0.36
RELA-202ENST00000406246 MIAQ16674 131 aa12.81□□□□□ -0.36
RELA-202ENST00000406246 PGPEP1Q9NXJ5 209 aa12.8□□□□□ -0.36
RELA-202ENST00000406246 C6orf223Q8N319 242 aa12.8□□□□□ -0.36
RELA-202ENST00000406246 SOSTDC1Q6X4U4 206 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms