RNA–Protein interactions for RNA: ENST00000405885.6

IRF1-202, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene IRF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-202ENST00000405885 TIRAPP58753 221 aa11.49□□□□□ -0.57
IRF1-202ENST00000405885 C15orf53Q8NAA6 179 aa11.49□□□□□ -0.57
IRF1-202ENST00000405885 IGLV10-54A0A075B6I4 117 aa11.48□□□□□ -0.57
IRF1-202ENST00000405885 LINC00959A0A1B0GUT2 108 aa11.48□□□□□ -0.57
IRF1-202ENST00000405885 BOD1L2Q8IYS8 172 aa11.48□□□□□ -0.57
IRF1-202ENST00000405885 KLK12Q9UKR0 248 aa11.48□□□□□ -0.57
IRF1-202ENST00000405885 DNAH1Q9P2D7 4330 aa11.48□□□□□ -0.57
IRF1-202ENST00000405885 FAM19A3Q7Z5A8 133 aa11.48□□□□□ -0.57
IRF1-202ENST00000405885 LINC00588Q9Y4M8 146 aa11.48□□□□□ -0.57
IRF1-202ENST00000405885 IGLV5-45A0A087WSX0 123 aa11.47□□□□□ -0.57
IRF1-202ENST00000405885 XCL1P47992 114 aa11.47□□□□□ -0.57
IRF1-202ENST00000405885 HERVK_113P63121 156 aa11.47□□□□□ -0.57
IRF1-202ENST00000405885 REG3AQ06141 175 aa11.47□□□□□ -0.57
IRF1-202ENST00000405885 DLEU1O43261 78 aa11.47□□□□□ -0.57
IRF1-202ENST00000405885 C2orf91Q6ZV80 131 aa11.47□□□□□ -0.57
IRF1-202ENST00000405885 HNRNPA3P51991 378 aaKnown RBP11.46□□□□□ -0.57
IRF1-202ENST00000405885 HERVK_113P61574 105 aa11.46□□□□□ -0.57
IRF1-202ENST00000405885 CCL25O15444 150 aa11.45□□□□□ -0.58
IRF1-202ENST00000405885 COL5A1-AS1Q5SY13 56 aa11.44□□□□□ -0.58
IRF1-202ENST00000405885 IGHV3OR16-9A0A0B4J2B5 98 aa11.44□□□□□ -0.58
IRF1-202ENST00000405885 J3QQQ9 107 aa11.44□□□□□ -0.58
IRF1-202ENST00000405885 SEC11AP67812 179 aa11.44□□□□□ -0.58
IRF1-202ENST00000405885 ENHOQ6UWT2 76 aa11.44□□□□□ -0.58
IRF1-202ENST00000405885 C5orf38Q86SI9 138 aa11.44□□□□□ -0.58
IRF1-202ENST00000405885 IGHV1-58A0A0C4DH39 117 aa11.43□□□□□ -0.58
IRF1-202ENST00000405885 SMIM1B2RUZ4 78 aa11.43□□□□□ -0.58
IRF1-202ENST00000405885 UBE2WQ96B02 151 aa11.42□□□□□ -0.58
IRF1-202ENST00000405885 MYMXA0A1B0GTQ4 84 aa11.42□□□□□ -0.58
IRF1-202ENST00000405885 ZNF815PA8K554 130 aa11.42□□□□□ -0.58
IRF1-202ENST00000405885 LEPROTO15243 131 aa11.42□□□□□ -0.58
IRF1-202ENST00000405885 SS18Q15532 418 aa11.42□□□□□ -0.58
IRF1-202ENST00000405885 PLEKHB2Q96CS7 222 aa11.42□□□□□ -0.58
IRF1-202ENST00000405885 PRR34Q9NV39 138 aa11.42□□□□□ -0.58
IRF1-202ENST00000405885 APLNQ9ULZ1 77 aa11.42□□□□□ -0.58
IRF1-202ENST00000405885 H3BRM9 83 aa11.41□□□□□ -0.58
IRF1-202ENST00000405885 CCL18P55774 89 aa11.41□□□□□ -0.58
IRF1-202ENST00000405885 CHCHD10Q8WYQ3 142 aaPredicted RBP11.41□□□□□ -0.58
IRF1-202ENST00000405885 MRPS16Q9Y3D3 137 aaKnown RBP11.41□□□□□ -0.58
IRF1-202ENST00000405885 LGALS3P17931 250 aaKnown RBP11.4□□□□□ -0.58
IRF1-202ENST00000405885 LINC01556Q5JQF7 62 aa11.39□□□□□ -0.59
IRF1-202ENST00000405885 DNAH10Q8IVF4 4471 aa11.39□□□□□ -0.59
IRF1-202ENST00000405885 IGLV5-39A0A0G2JS06 123 aa11.39□□□□□ -0.59
IRF1-202ENST00000405885 ZFAND6Q6FIF0 208 aa11.39□□□□□ -0.59
IRF1-202ENST00000405885 A0A087WZ39 114 aa11.37□□□□□ -0.59
IRF1-202ENST00000405885 CRPP02741 224 aa11.37□□□□□ -0.59
IRF1-202ENST00000405885 DNAH10OSP0CZ25 163 aa11.37□□□□□ -0.59
IRF1-202ENST00000405885 SIVA1O15304 175 aa11.37□□□□□ -0.59
IRF1-202ENST00000405885 HINT1P49773 126 aaPredicted RBP11.37□□□□□ -0.59
IRF1-202ENST00000405885 BATFQ16520 125 aa11.37□□□□□ -0.59
IRF1-202ENST00000405885 C10orf126Q8N4M7 172 aa11.37□□□□□ -0.59
IRF1-202ENST00000405885 NUPR2A6NF83 97 aa11.36□□□□□ -0.59
IRF1-202ENST00000405885 CD164L2Q6UWJ8 174 aa11.36□□□□□ -0.59
IRF1-202ENST00000405885 FOXI1Q12951 378 aa11.36□□□□□ -0.59
IRF1-202ENST00000405885 SCGB1D4Q6XE38 83 aa11.36□□□□□ -0.59
IRF1-202ENST00000405885 TOMM7Q9P0U1 55 aa11.36□□□□□ -0.59
IRF1-202ENST00000405885 GAGE12HA6NDE8 117 aa11.35□□□□□ -0.59
IRF1-202ENST00000405885 NDUFA12Q9UI09 145 aa11.35□□□□□ -0.59
IRF1-202ENST00000405885 Q9H8V8 135 aa11.34□□□□□ -0.59
IRF1-202ENST00000405885 ORAOV1Q8WV07 137 aa11.34□□□□□ -0.59
IRF1-202ENST00000405885 ZNF625Q96I27 306 aaPredicted RBP11.34□□□□□ -0.59
IRF1-202ENST00000405885 Q9HAA7 133 aa11.34□□□□□ -0.59
IRF1-202ENST00000405885 KMT2AQ03164 3969 aa11.33□□□□□ -0.6
IRF1-202ENST00000405885 UPK3BQ9BT76 320 aa11.33□□□□□ -0.6
IRF1-202ENST00000405885 COX7A2LO14548 114 aa11.32□□□□□ -0.6
IRF1-202ENST00000405885 KLK5Q9Y337 293 aaPredicted RBP11.32□□□□□ -0.6
IRF1-202ENST00000405885 VPS13DQ5THJ4 4388 aa11.32□□□□□ -0.6
IRF1-202ENST00000405885 MIAQ16674 131 aa11.31□□□□□ -0.6
IRF1-202ENST00000405885 UBE2DNLQ8IWF7 75 aa11.31□□□□□ -0.6
IRF1-202ENST00000405885 HIGD1BQ9P298 99 aa11.31□□□□□ -0.6
IRF1-202ENST00000405885 A0A0J9YXY3 114 aa11.31□□□□□ -0.6
IRF1-202ENST00000405885 K7EP13 123 aa11.31□□□□□ -0.6
IRF1-202ENST00000405885 KRTAP26-1Q6PEX3 210 aa11.31□□□□□ -0.6
IRF1-202ENST00000405885 COX7B2Q8TF08 81 aa11.31□□□□□ -0.6
IRF1-202ENST00000405885 KRTAP1-5Q9BYS1 174 aa11.31□□□□□ -0.6
IRF1-202ENST00000405885 MALP21145 153 aa11.3□□□□□ -0.6
IRF1-202ENST00000405885 BVES-AS1Q5T3Y7 98 aa11.29□□□□□ -0.6
IRF1-202ENST00000405885 LINC00526Q96FQ7 95 aa11.29□□□□□ -0.6
IRF1-202ENST00000405885 IGKV2D-24A0A075B6R9 120 aa11.29□□□□□ -0.6
IRF1-202ENST00000405885 TRAV8-4A0A0B4J246 113 aa11.29□□□□□ -0.6
IRF1-202ENST00000405885 NDUFA1O15239 70 aa11.29□□□□□ -0.6
IRF1-202ENST00000405885 HIST1H4GQ99525 98 aa11.28□□□□□ -0.6
IRF1-202ENST00000405885 COX11Q9Y6N1 276 aa11.28□□□□□ -0.6
IRF1-202ENST00000405885 A0A0U1RRA0 63 aa11.28□□□□□ -0.6
IRF1-202ENST00000405885 GCSHP23434 173 aa11.28□□□□□ -0.6
IRF1-202ENST00000405885 ADAMTSL4-AS1Q5T5F5 129 aa11.28□□□□□ -0.6
IRF1-202ENST00000405885 C2orf82Q6UX34 121 aa11.28□□□□□ -0.6
IRF1-202ENST00000405885 IBA57-AS1B1ANH7 110 aa11.27□□□□□ -0.61
IRF1-202ENST00000405885 HSD52Q0P140 79 aa11.27□□□□□ -0.61
IRF1-202ENST00000405885 DAND5Q8N907 189 aa11.27□□□□□ -0.61
IRF1-202ENST00000405885 LITAFQ99732 161 aa11.27□□□□□ -0.61
IRF1-202ENST00000405885 C1orf43Q9BWL3 253 aa11.27□□□□□ -0.61
IRF1-202ENST00000405885 MUC7Q8TAX7 377 aa11.26□□□□□ -0.61
IRF1-202ENST00000405885 FXYD2P54710 66 aa11.26□□□□□ -0.61
IRF1-202ENST00000405885 KIAA0087Q14695 138 aa11.26□□□□□ -0.61
IRF1-202ENST00000405885 C6orf226Q5I0X4 101 aa11.26□□□□□ -0.61
IRF1-202ENST00000405885 SRSF9Q13242 221 aaKnown RBP eCLIP11.25□□□□□ -0.61
IRF1-202ENST00000405885 CASC10Q5T4H9 136 aa11.25□□□□□ -0.61
IRF1-202ENST00000405885 C6orf223Q8N319 242 aa11.25□□□□□ -0.61
IRF1-202ENST00000405885 UBE2V1Q13404 147 aa11.24□□□□□ -0.61
IRF1-202ENST00000405885 CEND1Q8N111 149 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms