RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 PRO0628Q9UI54 55 aa10.24□□□□□ -0.77
RERE-204ENST00000400908 TRAV10A0A0B4J240 114 aa10.24□□□□□ -0.77
RERE-204ENST00000400908 U3KQK5 164 aa10.24□□□□□ -0.77
RERE-204ENST00000400908 FBXL19-AS1Q494R0 122 aa10.23□□□□□ -0.77
RERE-204ENST00000400908 Q8N3U1 123 aa10.22□□□□□ -0.77
RERE-204ENST00000400908 TNCP24821 2201 aa10.22□□□□□ -0.77
RERE-204ENST00000400908 LINC00959A0A1B0GUT2 108 aa10.22□□□□□ -0.77
RERE-204ENST00000400908 RPL28P46779 137 aaKnown RBP10.22□□□□□ -0.77
RERE-204ENST00000400908 LIMD2Q9BT23 127 aa10.22□□□□□ -0.77
RERE-204ENST00000400908 MED12LQ86YW9 2145 aa10.21□□□□□ -0.77
RERE-204ENST00000400908 DEFB114Q30KQ6 69 aa10.21□□□□□ -0.77
RERE-204ENST00000400908 CIRBP-AS1Q8TBR5 109 aa10.21□□□□□ -0.77
RERE-204ENST00000400908 MBD6Q96DN6 1003 aa10.21□□□□□ -0.77
RERE-204ENST00000400908 CXCL6P80162 114 aa10.21□□□□□ -0.78
RERE-204ENST00000400908 C2orf91Q6ZV80 131 aa10.21□□□□□ -0.78
RERE-204ENST00000400908 NRGNQ92686 78 aa10.21□□□□□ -0.78
RERE-204ENST00000400908 BBC3Q96PG8 261 aaPredicted RBP10.21□□□□□ -0.78
RERE-204ENST00000400908 IGLV2-18A0A075B6J9 118 aa10.2□□□□□ -0.78
RERE-204ENST00000400908 hDV103S1A0JD37 113 aa10.2□□□□□ -0.78
RERE-204ENST00000400908 DAZAP2Q15038 168 aaPredicted RBP10.2□□□□□ -0.78
RERE-204ENST00000400908 C11orf1Q9H5F2 150 aa10.2□□□□□ -0.78
RERE-204ENST00000400908 DSCAML1Q8TD84 2053 aa10.2□□□□□ -0.78
RERE-204ENST00000400908 TSHBP01222 138 aa10.2□□□□□ -0.78
RERE-204ENST00000400908 PROK1P58294 105 aa10.19□□□□□ -0.78
RERE-204ENST00000400908 LELP1Q5T871 98 aa10.19□□□□□ -0.78
RERE-204ENST00000400908 Q8IZM0 81 aa10.18□□□□□ -0.78
RERE-204ENST00000400908 TMEM254Q8TBM7 123 aa10.18□□□□□ -0.78
RERE-204ENST00000400908 SPINT4Q6UDR6 99 aa10.18□□□□□ -0.78
RERE-204ENST00000400908 FAM208BQ5VWN6 2430 aa10.18□□□□□ -0.78
RERE-204ENST00000400908 Q6ZS46 218 aa10.18□□□□□ -0.78
RERE-204ENST00000400908 Q8N814 137 aa10.18□□□□□ -0.78
RERE-204ENST00000400908 M0R2N4 97 aa10.18□□□□□ -0.78
RERE-204ENST00000400908 RNASE3P12724 160 aaKnown RBP10.17□□□□□ -0.78
RERE-204ENST00000400908 ZNF843Q8N446 348 aa10.17□□□□□ -0.78
RERE-204ENST00000400908 A0A1B0GU69 56 aa10.17□□□□□ -0.78
RERE-204ENST00000400908 PRR14LQ5THK1 2151 aa10.16□□□□□ -0.78
RERE-204ENST00000400908 TNFRSF13BO14836 293 aaPredicted RBP10.16□□□□□ -0.78
RERE-204ENST00000400908 P0C879 139 aa10.16□□□□□ -0.78
RERE-204ENST00000400908 BRWD1-AS2P59051 145 aa10.16□□□□□ -0.78
RERE-204ENST00000400908 Q8N6K4 173 aa10.16□□□□□ -0.78
RERE-204ENST00000400908 ANKHD1Q8IWZ3 2542 aaKnown RBP10.15□□□□□ -0.78
RERE-204ENST00000400908 KPRPQ5T749 579 aaPredicted RBP10.15□□□□□ -0.78
RERE-204ENST00000400908 PRORYQ9H606 182 aa10.15□□□□□ -0.78
RERE-204ENST00000400908 WDR87Q6ZQQ6 2873 aa10.15□□□□□ -0.78
RERE-204ENST00000400908 REG3GQ6UW15 175 aa10.15□□□□□ -0.79
RERE-204ENST00000400908 LINC00482Q8N8I6 264 aa10.14□□□□□ -0.79
RERE-204ENST00000400908 CYSRT1A8MQ03 144 aa10.14□□□□□ -0.79
RERE-204ENST00000400908 PRLHP81277 87 aa10.14□□□□□ -0.79
RERE-204ENST00000400908 LINC00574Q9H8X3 128 aa10.14□□□□□ -0.79
RERE-204ENST00000400908 ZNF702PQ9H963 129 aa10.14□□□□□ -0.79
RERE-204ENST00000400908 LINC00575Q6W349 94 aa10.13□□□□□ -0.79
RERE-204ENST00000400908 C1orf229Q6ZS94 237 aaPredicted RBP10.13□□□□□ -0.79
RERE-204ENST00000400908 HCG22E2RYF7 251 aa10.12□□□□□ -0.79
RERE-204ENST00000400908 CRIP1P50238 77 aa10.12□□□□□ -0.79
RERE-204ENST00000400908 DNAH12Q6ZR08 3092 aa10.12□□□□□ -0.79
RERE-204ENST00000400908 C19orf84I3L1E1 186 aa10.12□□□□□ -0.79
RERE-204ENST00000400908 CUL9Q8IWT3 2517 aa10.12□□□□□ -0.79
RERE-204ENST00000400908 ODF3BA8MYP8 253 aa10.12□□□□□ -0.79
RERE-204ENST00000400908 TRBV10-3A0A0K0K1G6 114 aa10.11□□□□□ -0.79
RERE-204ENST00000400908 CRIP2P52943 208 aaPredicted RBP10.11□□□□□ -0.79
RERE-204ENST00000400908 ZNF295-AS1Q8N0V1 137 aa10.11□□□□□ -0.79
RERE-204ENST00000400908 CENPFP49454 3210 aa10.11□□□□□ -0.79
RERE-204ENST00000400908 EGFEM1PQ0D2K5 195 aa10.11□□□□□ -0.79
RERE-204ENST00000400908 EIF4EBP1Q13541 118 aaPredicted RBP10.11□□□□□ -0.79
RERE-204ENST00000400908 Q9BRP9 147 aa10.1□□□□□ -0.79
RERE-204ENST00000400908 A0A087WSZ3 146 aa10.1□□□□□ -0.79
RERE-204ENST00000400908 C1orf64Q8NEQ6 169 aa10.1□□□□□ -0.79
RERE-204ENST00000400908 PTPRQQ9UMZ3 2332 aa10.1□□□□□ -0.79
RERE-204ENST00000400908 A0A087WYN8 130 aa10.1□□□□□ -0.79
RERE-204ENST00000400908 C8orf87E5RJ46 101 aa10.1□□□□□ -0.79
RERE-204ENST00000400908 LY6G6CO95867 125 aa10.09□□□□□ -0.79
RERE-204ENST00000400908 PLA2G5P39877 138 aa10.09□□□□□ -0.79
RERE-204ENST00000400908 C7orf65Q6ZTY9 151 aa10.09□□□□□ -0.79
RERE-204ENST00000400908 SBSPONQ8IVN8 264 aa10.09□□□□□ -0.79
RERE-204ENST00000400908 Q6YL49 198 aa10.09□□□□□ -0.79
RERE-204ENST00000400908 CDC42SE2Q9NRR3 84 aa10.08□□□□□ -0.8
RERE-204ENST00000400908 POLR2KP53803 58 aaKnown RBP10.07□□□□□ -0.8
RERE-204ENST00000400908 LMO4P61968 165 aa10.07□□□□□ -0.8
RERE-204ENST00000400908 SHISA2Q6UWI4 295 aa10.07□□□□□ -0.8
RERE-204ENST00000400908 SPG11Q96JI7 2443 aa10.07□□□□□ -0.8
RERE-204ENST00000400908 UNQ6190/PRO20217Q6UXQ8 127 aa10.07□□□□□ -0.8
RERE-204ENST00000400908 ACACBO00763 2458 aa10.06□□□□□ -0.8
RERE-204ENST00000400908 ARHGAP21Q5T5U3 1957 aa10.06□□□□□ -0.8
RERE-204ENST00000400908 NUPR2A6NF83 97 aa10.06□□□□□ -0.8
RERE-204ENST00000400908 IGKV2D-30A0A075B6S6 120 aa10.05□□□□□ -0.8
RERE-204ENST00000400908 IGKV2-30P06310 120 aa10.05□□□□□ -0.8
RERE-204ENST00000400908 MRGPRG-AS1Q2M3A8 158 aa10.05□□□□□ -0.8
RERE-204ENST00000400908 DEFB116Q30KQ4 102 aa10.05□□□□□ -0.8
RERE-204ENST00000400908 Q9UF83 564 aa10.05□□□□□ -0.8
RERE-204ENST00000400908 ATP11AUNQ6ZP68 121 aa10.04□□□□□ -0.8
RERE-204ENST00000400908 C6orf223Q8N319 242 aa10.04□□□□□ -0.8
RERE-204ENST00000400908 ACYP2P14621 99 aa10.04□□□□□ -0.8
RERE-204ENST00000400908 FSTL3O95633 263 aa10.03□□□□□ -0.8
RERE-204ENST00000400908 COL5A1P20908 1838 aaPredicted RBP10.02□□□□□ -0.8
RERE-204ENST00000400908 WNK1Q9H4A3 2382 aa10.02□□□□□ -0.8
RERE-204ENST00000400908 FSHBP01225 129 aa10.02□□□□□ -0.81
RERE-204ENST00000400908 LINC00242Q5T6M2 205 aa10.02□□□□□ -0.81
RERE-204ENST00000400908 C11orf71Q6IPW1 123 aa10.02□□□□□ -0.81
RERE-204ENST00000400908 Q6ZTC4 211 aa10.01□□□□□ -0.81
RERE-204ENST00000400908 IGLV2-11P01706 119 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms