RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 LOC100131303A0A0U1RQF7 123 aa16.32■□□□□ 0.2
RABGGTA-202ENST00000399409 FHL2Q14192 279 aa16.32■□□□□ 0.2
RABGGTA-202ENST00000399409 CCDC168Q8NDH2 2452 aa16.3■□□□□ 0.2
RABGGTA-202ENST00000399409 MEIG1Q5JSS6 88 aa16.3■□□□□ 0.2
RABGGTA-202ENST00000399409 PDZD2O15018 2839 aa16.28■□□□□ 0.2
RABGGTA-202ENST00000399409 H3BT86 120 aa16.28■□□□□ 0.2
RABGGTA-202ENST00000399409 LST1O00453 97 aa16.28■□□□□ 0.2
RABGGTA-202ENST00000399409 NTN5Q8WTR8 489 aaPredicted RBP16.28■□□□□ 0.2
RABGGTA-202ENST00000399409 TRBV6-8A0A0A6YYG3 113 aa16.28■□□□□ 0.2
RABGGTA-202ENST00000399409 GAGE6Q13070 117 aa16.26■□□□□ 0.19
RABGGTA-202ENST00000399409 C2orf82Q6UX34 121 aa16.26■□□□□ 0.19
RABGGTA-202ENST00000399409 KIR2DL5BQ8NHK3 375 aa16.26■□□□□ 0.19
RABGGTA-202ENST00000399409 TENM4Q6N022 2769 aa16.26■□□□□ 0.19
RABGGTA-202ENST00000399409 PF4P02776 101 aa16.26■□□□□ 0.19
RABGGTA-202ENST00000399409 NF1P21359 2839 aa16.25■□□□□ 0.19
RABGGTA-202ENST00000399409 A0A0U1RRA0 63 aa16.24■□□□□ 0.19
RABGGTA-202ENST00000399409 SOSTDC1Q6X4U4 206 aa16.24■□□□□ 0.19
RABGGTA-202ENST00000399409 LINC00482Q8N8I6 264 aa16.24■□□□□ 0.19
RABGGTA-202ENST00000399409 CLEC2BQ92478 149 aa16.24■□□□□ 0.19
RABGGTA-202ENST00000399409 LINC00612Q8N6U2 182 aa16.24■□□□□ 0.19
RABGGTA-202ENST00000399409 COX7B2Q8TF08 81 aa16.24■□□□□ 0.19
RABGGTA-202ENST00000399409 XGP55808 180 aa16.23■□□□□ 0.19
RABGGTA-202ENST00000399409 UBE2WQ96B02 151 aa16.23■□□□□ 0.19
RABGGTA-202ENST00000399409 CHCHD5Q9BSY4 110 aa16.23■□□□□ 0.19
RABGGTA-202ENST00000399409 KRTAP10-3P60369 221 aa16.22■□□□□ 0.19
RABGGTA-202ENST00000399409 MT-ATP8P03928 68 aa16.21■□□□□ 0.19
RABGGTA-202ENST00000399409 SETXQ7Z333 2677 aaKnown RBP16.21■□□□□ 0.19
RABGGTA-202ENST00000399409 SHISA2Q6UWI4 295 aa16.2■□□□□ 0.18
RABGGTA-202ENST00000399409 IGLV4-60A0A075B6I1 120 aa16.2■□□□□ 0.18
RABGGTA-202ENST00000399409 SMIM9A6NGZ8 99 aa16.2■□□□□ 0.18
RABGGTA-202ENST00000399409 CRLF1O75462 422 aa16.2■□□□□ 0.18
RABGGTA-202ENST00000399409 COX7A2LO14548 114 aa16.19■□□□□ 0.18
RABGGTA-202ENST00000399409 ANK3Q12955 4377 aaKnown RBP16.19■□□□□ 0.18
RABGGTA-202ENST00000399409 DEFB130BP0DP73 79 aa16.19■□□□□ 0.18
RABGGTA-202ENST00000399409 DEFB130AP0DP74 79 aa16.19■□□□□ 0.18
RABGGTA-202ENST00000399409 TEX49A0A1B0GTD5 131 aa16.18■□□□□ 0.18
RABGGTA-202ENST00000399409 NBPF19A0A087WUL8 3843 aa16.17■□□□□ 0.18
RABGGTA-202ENST00000399409 IGHV3OR16-9A0A0B4J2B5 98 aa16.17■□□□□ 0.18
RABGGTA-202ENST00000399409 ACANP16112 2415 aa16.17■□□□□ 0.18
RABGGTA-202ENST00000399409 A0A1B0GV72 72 aa16.16■□□□□ 0.18
RABGGTA-202ENST00000399409 TRAV8-4A0A0B4J246 113 aa16.16■□□□□ 0.18
RABGGTA-202ENST00000399409 NOTCH3Q9UM47 2321 aa16.16■□□□□ 0.18
RABGGTA-202ENST00000399409 A0A087WZ39 114 aa16.15■□□□□ 0.18
RABGGTA-202ENST00000399409 IGKV3OR2-268A0A0C4DH90 116 aa16.15■□□□□ 0.18
RABGGTA-202ENST00000399409 SMR3AQ99954 134 aa16.15■□□□□ 0.18
RABGGTA-202ENST00000399409 JMJD1CQ15652 2540 aa16.15■□□□□ 0.18
RABGGTA-202ENST00000399409 FAM222AQ5U5X8 452 aa16.15■□□□□ 0.18
RABGGTA-202ENST00000399409 TOMM7Q9P0U1 55 aa16.14■□□□□ 0.17
RABGGTA-202ENST00000399409 X6R8D5 127 aa16.14■□□□□ 0.17
RABGGTA-202ENST00000399409 HELZ2Q9BYK8 2649 aaKnown RBP16.14■□□□□ 0.17
RABGGTA-202ENST00000399409 TRAV13-2A0A0B4J235 113 aa16.14■□□□□ 0.17
RABGGTA-202ENST00000399409 GYPEP15421 78 aa16.14■□□□□ 0.17
RABGGTA-202ENST00000399409 DEFB121Q5J5C9 76 aa16.14■□□□□ 0.17
RABGGTA-202ENST00000399409 SETD2Q9BYW2 2564 aaPredicted RBP16.13■□□□□ 0.17
RABGGTA-202ENST00000399409 C9orf66Q5T8R8 295 aa16.12■□□□□ 0.17
RABGGTA-202ENST00000399409 LINC00959A0A1B0GUT2 108 aa16.11■□□□□ 0.17
RABGGTA-202ENST00000399409 LY6G6DO95868 133 aa16.11■□□□□ 0.17
RABGGTA-202ENST00000399409 MIR7-3HGQ8N6C7 128 aa16.11■□□□□ 0.17
RABGGTA-202ENST00000399409 PRO0255Q9UI72 69 aa16.11■□□□□ 0.17
RABGGTA-202ENST00000399409 MTORP42345 2549 aa16.11■□□□□ 0.17
RABGGTA-202ENST00000399409 A0A1B0GUV1 79 aa16.11■□□□□ 0.17
RABGGTA-202ENST00000399409 IBA57-AS1B1ANH7 110 aa16.1■□□□□ 0.17
RABGGTA-202ENST00000399409 TRACP01848 142 aa16.1■□□□□ 0.17
RABGGTA-202ENST00000399409 CKS1BP61024 79 aa16.1■□□□□ 0.17
RABGGTA-202ENST00000399409 LYRM9A8MSI8 78 aa16.09■□□□□ 0.17
RABGGTA-202ENST00000399409 CRPP02741 224 aa16.08■□□□□ 0.17
RABGGTA-202ENST00000399409 LINC00158P58513 81 aa16.08■□□□□ 0.16
RABGGTA-202ENST00000399409 SS18Q15532 418 aa16.07■□□□□ 0.16
RABGGTA-202ENST00000399409 SND1-IT1Q9HBX3 110 aa16.07■□□□□ 0.16
RABGGTA-202ENST00000399409 RPL28P46779 137 aaKnown RBP16.07■□□□□ 0.16
RABGGTA-202ENST00000399409 C5orf38Q86SI9 138 aa16.07■□□□□ 0.16
RABGGTA-202ENST00000399409 CITED1Q99966 193 aa16.07■□□□□ 0.16
RABGGTA-202ENST00000399409 C2CD3Q4AC94 2353 aa16.07■□□□□ 0.16
RABGGTA-202ENST00000399409 GCN1Q92616 2671 aaKnown RBP16.06■□□□□ 0.16
RABGGTA-202ENST00000399409 FAM240AA0A1B0GVK7 77 aa16.06■□□□□ 0.16
RABGGTA-202ENST00000399409 CUBNO60494 3623 aa16.06■□□□□ 0.16
RABGGTA-202ENST00000399409 SNCGO76070 127 aa16.05■□□□□ 0.16
RABGGTA-202ENST00000399409 LINC01561Q8N1V8 128 aa16.05■□□□□ 0.16
RABGGTA-202ENST00000399409 HIVEP2P31629 2446 aa16.04■□□□□ 0.16
RABGGTA-202ENST00000399409 NIPBLQ6KC79 2804 aaeCLIP16.04■□□□□ 0.16
RABGGTA-202ENST00000399409 ITPR2Q14571 2701 aa16.04■□□□□ 0.16
RABGGTA-202ENST00000399409 MRPL23Q16540 153 aaKnown RBP16.03■□□□□ 0.16
RABGGTA-202ENST00000399409 PAX4O43316 350 aa16.03■□□□□ 0.16
RABGGTA-202ENST00000399409 UNC79Q9P2D8 2635 aa16.02■□□□□ 0.16
RABGGTA-202ENST00000399409 IGKV2-28A0A075B6P5 120 aa16.02■□□□□ 0.15
RABGGTA-202ENST00000399409 IGKV2D-28P01615 120 aa16.02■□□□□ 0.15
RABGGTA-202ENST00000399409 CCL18P55774 89 aa16.02■□□□□ 0.15
RABGGTA-202ENST00000399409 LINC00337Q8N6G1 96 aa16.02■□□□□ 0.15
RABGGTA-202ENST00000399409 APOC4P55056 127 aa16.01■□□□□ 0.15
RABGGTA-202ENST00000399409 C6orf226Q5I0X4 101 aa16.01■□□□□ 0.15
RABGGTA-202ENST00000399409 Q8IZM0 81 aa15.99■□□□□ 0.15
RABGGTA-202ENST00000399409 TRAV26-1A0A087WT03 109 aa15.99■□□□□ 0.15
RABGGTA-202ENST00000399409 XCL1P47992 114 aa15.99■□□□□ 0.15
RABGGTA-202ENST00000399409 GAGE2BQ13066 116 aa15.98■□□□□ 0.15
RABGGTA-202ENST00000399409 GAGE2EQ4V326 116 aa15.98■□□□□ 0.15
RABGGTA-202ENST00000399409 GAGE2DQ9UEU5 116 aa15.98■□□□□ 0.15
RABGGTA-202ENST00000399409 BAALC-AS2P0C853 105 aa15.98■□□□□ 0.15
RABGGTA-202ENST00000399409 Q6Q795 121 aa15.98■□□□□ 0.15
RABGGTA-202ENST00000399409 C15orf53Q8NAA6 179 aa15.98■□□□□ 0.15
RABGGTA-202ENST00000399409 PFN2P35080 140 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms