RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 IGHV3-64A0A075B6Q5 118 aa12.83□□□□□ -0.36
MBD1-208ENST00000398493 A0A0J9YY99 117 aa12.83□□□□□ -0.36
MBD1-208ENST00000398493 IGHV3-30-3P0DP02 117 aa12.83□□□□□ -0.36
MBD1-208ENST00000398493 GYPEP15421 78 aa12.83□□□□□ -0.36
MBD1-208ENST00000398493 DAD1P61803 113 aa12.83□□□□□ -0.36
MBD1-208ENST00000398493 FAM19A3Q7Z5A8 133 aa12.83□□□□□ -0.36
MBD1-208ENST00000398493 ATP6V0E2Q8NHE4 81 aa12.83□□□□□ -0.36
MBD1-208ENST00000398493 IGLL5B9A064 214 aa12.82□□□□□ -0.36
MBD1-208ENST00000398493 A0A0J9YWU9 116 aa12.81□□□□□ -0.36
MBD1-208ENST00000398493 SPART-AS1P0CW21 52 aa12.81□□□□□ -0.36
MBD1-208ENST00000398493 IGLV5-45A0A087WSX0 123 aa12.81□□□□□ -0.36
MBD1-208ENST00000398493 K7ERJ3 54 aa12.81□□□□□ -0.36
MBD1-208ENST00000398493 K7ERU9 68 aa12.81□□□□□ -0.36
MBD1-208ENST00000398493 PAX4O43316 350 aa12.81□□□□□ -0.36
MBD1-208ENST00000398493 OCIAD2Q56VL3 154 aa12.8□□□□□ -0.36
MBD1-208ENST00000398493 VSIG2Q96IQ7 327 aa12.8□□□□□ -0.36
MBD1-208ENST00000398493 CHCHD5Q9BSY4 110 aa12.8□□□□□ -0.36
MBD1-208ENST00000398493 TRAV13-1A0A0B4J241 112 aa12.78□□□□□ -0.36
MBD1-208ENST00000398493 TEX48A0A1B0GUV7 120 aa12.78□□□□□ -0.36
MBD1-208ENST00000398493 ATP5G1P05496 136 aa12.78□□□□□ -0.36
MBD1-208ENST00000398493 SPINK8P0C7L1 97 aa12.78□□□□□ -0.36
MBD1-208ENST00000398493 GAGE6Q13070 117 aa12.78□□□□□ -0.36
MBD1-208ENST00000398493 LINC00242Q5T6M2 205 aa12.78□□□□□ -0.36
MBD1-208ENST00000398493 NAA38Q9BRA0 125 aaKnown RBP12.78□□□□□ -0.36
MBD1-208ENST00000398493 CDKN2A-AS1Q9UH64 79 aa12.78□□□□□ -0.36
MBD1-208ENST00000398493 TRAV8-3A0A0A6YYJ7 113 aa12.78□□□□□ -0.36
MBD1-208ENST00000398493 STARD9Q9P2P6 4700 aa12.77□□□□□ -0.36
MBD1-208ENST00000398493 TMEM238C9JI98 176 aa12.76□□□□□ -0.37
MBD1-208ENST00000398493 C11orf68Q9H3H3 251 aaKnown RBP12.76□□□□□ -0.37
MBD1-208ENST00000398493 CELA1Q9UNI1 258 aa12.76□□□□□ -0.37
MBD1-208ENST00000398493 CSMD3Q7Z407 3707 aa12.76□□□□□ -0.37
MBD1-208ENST00000398493 RBX1P62877 108 aa12.76□□□□□ -0.37
MBD1-208ENST00000398493 LYRM7Q5U5X0 104 aa12.76□□□□□ -0.37
MBD1-208ENST00000398493 NDUFA12Q9UI09 145 aa12.76□□□□□ -0.37
MBD1-208ENST00000398493 COX6A2Q02221 97 aa12.75□□□□□ -0.37
MBD1-208ENST00000398493 PLECQ15149 4684 aaKnown RBP12.75□□□□□ -0.37
MBD1-208ENST00000398493 DYNC2H1Q8NCM8 4307 aaKnown RBP12.74□□□□□ -0.37
MBD1-208ENST00000398493 IGHV3-30P01768 117 aa12.74□□□□□ -0.37
MBD1-208ENST00000398493 IGHV3-30-5P0DP03 117 aa12.74□□□□□ -0.37
MBD1-208ENST00000398493 A0A0J9YXY3 114 aa12.74□□□□□ -0.37
MBD1-208ENST00000398493 F8W1H4 67 aa12.74□□□□□ -0.37
MBD1-208ENST00000398493 ZFAND6Q6FIF0 208 aa12.74□□□□□ -0.37
MBD1-208ENST00000398493 F5H768 121 aa12.72□□□□□ -0.37
MBD1-208ENST00000398493 C10orf126Q8N4M7 172 aa12.72□□□□□ -0.37
MBD1-208ENST00000398493 TMEM262E9PQX1 116 aa12.72□□□□□ -0.37
MBD1-208ENST00000398493 SH2D6Q7Z4S9 175 aa12.72□□□□□ -0.37
MBD1-208ENST00000398493 TRAV26-1A0A087WT03 109 aa12.71□□□□□ -0.38
MBD1-208ENST00000398493 IGLV5-39A0A0G2JS06 123 aa12.71□□□□□ -0.38
MBD1-208ENST00000398493 RPL24P83731 157 aaKnown RBP12.71□□□□□ -0.38
MBD1-208ENST00000398493 PGPEP1Q9NXJ5 209 aa12.71□□□□□ -0.38
MBD1-208ENST00000398493 A0A1B0GUV1 79 aa12.7□□□□□ -0.38
MBD1-208ENST00000398493 NANOS2P60321 138 aaKnown RBP12.7□□□□□ -0.38
MBD1-208ENST00000398493 IGLV4-60A0A075B6I1 120 aa12.69□□□□□ -0.38
MBD1-208ENST00000398493 MRPL23Q16540 153 aaKnown RBP12.69□□□□□ -0.38
MBD1-208ENST00000398493 C11orf45Q8TAV5 145 aa12.69□□□□□ -0.38
MBD1-208ENST00000398493 NDUFA1O15239 70 aa12.69□□□□□ -0.38
MBD1-208ENST00000398493 CIRBPQ14011 172 aaKnown RBP12.69□□□□□ -0.38
MBD1-208ENST00000398493 SMIM1B2RUZ4 78 aa12.68□□□□□ -0.38
MBD1-208ENST00000398493 TIMM17BO60830 172 aa12.68□□□□□ -0.38
MBD1-208ENST00000398493 A0A096LPF7 62 aa12.67□□□□□ -0.38
MBD1-208ENST00000398493 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.67□□□□□ -0.38
MBD1-208ENST00000398493 HTN3P15516 51 aa12.67□□□□□ -0.38
MBD1-208ENST00000398493 IGKV3OR2-268A0A0C4DH90 116 aa12.67□□□□□ -0.38
MBD1-208ENST00000398493 APOMO95445 188 aa12.67□□□□□ -0.38
MBD1-208ENST00000398493 MUSTN1Q8IVN3 82 aa12.67□□□□□ -0.38
MBD1-208ENST00000398493 SPANXDQ9BXN6 97 aa12.67□□□□□ -0.38
MBD1-208ENST00000398493 SPANXCQ9NY87 97 aa12.67□□□□□ -0.38
MBD1-208ENST00000398493 ICOSQ9Y6W8 199 aa12.67□□□□□ -0.38
MBD1-208ENST00000398493 Q6ZTC4 211 aa12.66□□□□□ -0.38
MBD1-208ENST00000398493 PRO1854Q9UHT4 67 aa12.66□□□□□ -0.38
MBD1-208ENST00000398493 A0A0B4J2C4 111 aa12.65□□□□□ -0.38
MBD1-208ENST00000398493 PRSS2P07478 247 aa12.65□□□□□ -0.38
MBD1-208ENST00000398493 CFC1BP0CG36 223 aa12.65□□□□□ -0.38
MBD1-208ENST00000398493 CFC1P0CG37 223 aa12.65□□□□□ -0.38
MBD1-208ENST00000398493 TRBV20-1A0A075B6N2 111 aa12.65□□□□□ -0.39
MBD1-208ENST00000398493 TSPAN13O95857 204 aa12.65□□□□□ -0.39
MBD1-208ENST00000398493 SS18Q15532 418 aa12.65□□□□□ -0.39
MBD1-208ENST00000398493 WWC2-AS2Q96NR7 200 aa12.65□□□□□ -0.39
MBD1-208ENST00000398493 HERV-K104P63124 156 aa12.64□□□□□ -0.39
MBD1-208ENST00000398493 LITAFQ99732 161 aa12.64□□□□□ -0.39
MBD1-208ENST00000398493 Q9H8V8 135 aa12.64□□□□□ -0.39
MBD1-208ENST00000398493 LINC00959A0A1B0GUT2 108 aa12.63□□□□□ -0.39
MBD1-208ENST00000398493 A4D1N5 150 aa12.63□□□□□ -0.39
MBD1-208ENST00000398493 MIAQ16674 131 aa12.63□□□□□ -0.39
MBD1-208ENST00000398493 RNF151Q2KHN1 245 aa12.63□□□□□ -0.39
MBD1-208ENST00000398493 VPS25Q9BRG1 176 aa12.63□□□□□ -0.39
MBD1-208ENST00000398493 H3BMG7 143 aa12.62□□□□□ -0.39
MBD1-208ENST00000398493 IFITM1P13164 125 aa12.62□□□□□ -0.39
MBD1-208ENST00000398493 J3QR89 54 aa12.62□□□□□ -0.39
MBD1-208ENST00000398493 COPS9Q8WXC6 57 aa12.62□□□□□ -0.39
MBD1-208ENST00000398493 IGHV3OR16-9A0A0B4J2B5 98 aa12.6□□□□□ -0.39
MBD1-208ENST00000398493 ADAMTSL4-AS1Q5T5F5 129 aa12.6□□□□□ -0.39
MBD1-208ENST00000398493 LELP1Q5T871 98 aa12.6□□□□□ -0.39
MBD1-208ENST00000398493 A0A087WZ39 114 aa12.6□□□□□ -0.39
MBD1-208ENST00000398493 COX7B2Q8TF08 81 aa12.6□□□□□ -0.39
MBD1-208ENST00000398493 LYSTQ99698 3801 aa12.59□□□□□ -0.39
MBD1-208ENST00000398493 LOC107984156A0A0G2JMH3 177 aa12.59□□□□□ -0.39
MBD1-208ENST00000398493 H3BNG1 76 aa12.59□□□□□ -0.39
MBD1-208ENST00000398493 ARL17AQ8IVW1 177 aa12.59□□□□□ -0.39
MBD1-208ENST00000398493 MEIG1Q5JSS6 88 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms