RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 C2orf88Q9BSF0 95 aa9.2□□□□□ -0.94
HDDC2-202ENST00000398153 HIGD2BQ4VC39 106 aa9.19□□□□□ -0.94
HDDC2-202ENST00000398153 AMELXQ99217 191 aa9.19□□□□□ -0.94
HDDC2-202ENST00000398153 VCX2Q9H322 139 aa9.19□□□□□ -0.94
HDDC2-202ENST00000398153 F8WDY8 70 aa9.18□□□□□ -0.94
HDDC2-202ENST00000398153 CIRBPQ14011 172 aaKnown RBP9.18□□□□□ -0.94
HDDC2-202ENST00000398153 FA2HQ7L5A8 372 aa9.18□□□□□ -0.94
HDDC2-202ENST00000398153 SCXQ7RTU7 201 aa9.18□□□□□ -0.94
HDDC2-202ENST00000398153 ERASQ7Z444 233 aa9.18□□□□□ -0.94
HDDC2-202ENST00000398153 OR10D4PQ8NGN7 298 aa9.18□□□□□ -0.94
HDDC2-202ENST00000398153 KRTAP17-1Q9BYP8 105 aa9.18□□□□□ -0.94
HDDC2-202ENST00000398153 SMCO4Q9NRQ5 59 aa9.18□□□□□ -0.94
HDDC2-202ENST00000398153 SEC11AP67812 179 aa9.17□□□□□ -0.94
HDDC2-202ENST00000398153 FAM19A3Q7Z5A8 133 aa9.17□□□□□ -0.94
HDDC2-202ENST00000398153 C5orf38Q86SI9 138 aa9.17□□□□□ -0.94
HDDC2-202ENST00000398153 CIRBP-AS1Q8TBR5 109 aa9.17□□□□□ -0.94
HDDC2-202ENST00000398153 C2orf48Q96LS8 159 aa9.17□□□□□ -0.94
HDDC2-202ENST00000398153 YPEL4Q96NS1 127 aa9.17□□□□□ -0.94
HDDC2-202ENST00000398153 KRTAP4-5Q9BYR2 181 aa9.17□□□□□ -0.94
HDDC2-202ENST00000398153 DNAH8Q96JB1 4490 aa9.17□□□□□ -0.94
HDDC2-202ENST00000398153 SMR3BP02814 79 aaPredicted RBP9.16□□□□□ -0.94
HDDC2-202ENST00000398153 UBE2D1P51668 147 aa9.16□□□□□ -0.94
HDDC2-202ENST00000398153 SYCNQ0VAF6 134 aa9.16□□□□□ -0.94
HDDC2-202ENST00000398153 LINC00242Q5T6M2 205 aa9.16□□□□□ -0.94
HDDC2-202ENST00000398153 Q5VSD8 79 aa9.16□□□□□ -0.94
HDDC2-202ENST00000398153 SLC7A5P1Q8MH63 180 aa9.16□□□□□ -0.94
HDDC2-202ENST00000398153 LINC01561Q8N1V8 128 aa9.16□□□□□ -0.94
HDDC2-202ENST00000398153 A0A087WZ39 114 aa9.15□□□□□ -0.94
HDDC2-202ENST00000398153 RAB5BP61020 215 aa9.15□□□□□ -0.94
HDDC2-202ENST00000398153 LINC00173Q6ZV60 143 aa9.15□□□□□ -0.94
HDDC2-202ENST00000398153 C18orf32Q8TCD1 76 aa9.15□□□□□ -0.94
HDDC2-202ENST00000398153 CARD19Q96LW7 228 aa9.15□□□□□ -0.94
HDDC2-202ENST00000398153 SCGB3A1Q96QR1 104 aa9.15□□□□□ -0.94
HDDC2-202ENST00000398153 LINC00474Q9P2X8 69 aa9.15□□□□□ -0.94
HDDC2-202ENST00000398153 IGLV4-69A0A075B6H9 119 aa9.14□□□□□ -0.95
HDDC2-202ENST00000398153 PLA2G1BP04054 148 aaKnown RBP9.14□□□□□ -0.95
HDDC2-202ENST00000398153 LINC00614P0C842 121 aa9.14□□□□□ -0.95
HDDC2-202ENST00000398153 HAMPP81172 84 aa9.14□□□□□ -0.95
HDDC2-202ENST00000398153 COX6A2Q02221 97 aa9.13□□□□□ -0.95
HDDC2-202ENST00000398153 RNF151Q2KHN1 245 aa9.13□□□□□ -0.95
HDDC2-202ENST00000398153 CAMK2N2Q96S95 79 aa9.13□□□□□ -0.95
HDDC2-202ENST00000398153 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.13□□□□□ -0.95
HDDC2-202ENST00000398153 HERVK_113P63121 156 aa9.12□□□□□ -0.95
HDDC2-202ENST00000398153 SPAG11BQ08648 103 aa9.12□□□□□ -0.95
HDDC2-202ENST00000398153 LINC00528Q8N1L1 170 aa9.12□□□□□ -0.95
HDDC2-202ENST00000398153 SPACA4Q8TDM5 124 aa9.12□□□□□ -0.95
HDDC2-202ENST00000398153 ORAOV1Q8WV07 137 aa9.12□□□□□ -0.95
HDDC2-202ENST00000398153 PCLOQ9Y6V0 5065 aa9.11□□□□□ -0.95
HDDC2-202ENST00000398153 LINC00526Q96FQ7 95 aa9.11□□□□□ -0.95
HDDC2-202ENST00000398153 DPH3Q96FX2 82 aa9.11□□□□□ -0.95
HDDC2-202ENST00000398153 SRRM2Q9UQ35 2752 aaKnown RBP9.11□□□□□ -0.95
HDDC2-202ENST00000398153 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.1□□□□□ -0.95
HDDC2-202ENST00000398153 CBLN2Q8IUK8 224 aa9.1□□□□□ -0.95
HDDC2-202ENST00000398153 MRPL35Q9NZE8 188 aaKnown RBP9.1□□□□□ -0.95
HDDC2-202ENST00000398153 VPS13BQ7Z7G8 4022 aa9.09□□□□□ -0.95
HDDC2-202ENST00000398153 LOC107984640A0A0U1RRK4 108 aa9.09□□□□□ -0.95
HDDC2-202ENST00000398153 PANO1I0J062 215 aa9.09□□□□□ -0.95
HDDC2-202ENST00000398153 NDUFA1O15239 70 aa9.09□□□□□ -0.95
HDDC2-202ENST00000398153 HBDP02042 147 aa9.09□□□□□ -0.95
HDDC2-202ENST00000398153 PMVKQ15126 192 aa9.09□□□□□ -0.95
HDDC2-202ENST00000398153 Q6ZRU5 148 aa9.09□□□□□ -0.95
HDDC2-202ENST00000398153 GEMIN7Q9H840 131 aaKnown RBP9.09□□□□□ -0.95
HDDC2-202ENST00000398153 PLAC8Q9NZF1 115 aa9.09□□□□□ -0.95
HDDC2-202ENST00000398153 A0A087WYN8 130 aa9.08□□□□□ -0.96
HDDC2-202ENST00000398153 TINCRA0A1B0GVN0 87 aa9.08□□□□□ -0.96
HDDC2-202ENST00000398153 ZC2HC1BQ5TFG8 222 aa9.08□□□□□ -0.96
HDDC2-202ENST00000398153 CHCHD1Q96BP2 118 aaKnown RBP9.08□□□□□ -0.96
HDDC2-202ENST00000398153 URB1-AS1Q96HZ7 61 aa9.08□□□□□ -0.96
HDDC2-202ENST00000398153 CST9LQ9H4G1 147 aa9.08□□□□□ -0.96
HDDC2-202ENST00000398153 INAFM2P0DMQ5 153 aa9.07□□□□□ -0.96
HDDC2-202ENST00000398153 KIAA0087Q14695 138 aa9.07□□□□□ -0.96
HDDC2-202ENST00000398153 A0A096LNI7 61 aa9.06□□□□□ -0.96
HDDC2-202ENST00000398153 A0A096LNJ9 63 aa9.06□□□□□ -0.96
HDDC2-202ENST00000398153 ATP5LO75964 103 aa9.06□□□□□ -0.96
HDDC2-202ENST00000398153 CHTF8P0CG12 524 aa9.06□□□□□ -0.96
HDDC2-202ENST00000398153 MAJINQ3KP22 176 aa9.06□□□□□ -0.96
HDDC2-202ENST00000398153 PACRGQ96M98 296 aaPredicted RBP9.06□□□□□ -0.96
HDDC2-202ENST00000398153 ABCA13Q86UQ4 5058 aa9.05□□□□□ -0.96
HDDC2-202ENST00000398153 IGLV5-45A0A087WSX0 123 aa9.05□□□□□ -0.96
HDDC2-202ENST00000398153 IGKV2-24A0A0C4DH68 120 aa9.05□□□□□ -0.96
HDDC2-202ENST00000398153 A0A0J9YXV3 536 aa9.05□□□□□ -0.96
HDDC2-202ENST00000398153 TRBV30A0A0K0K1B3 111 aa9.05□□□□□ -0.96
HDDC2-202ENST00000398153 PRSS2P07478 247 aa9.05□□□□□ -0.96
HDDC2-202ENST00000398153 TLX1NBP0CAT3 122 aa9.05□□□□□ -0.96
HDDC2-202ENST00000398153 PTTG1IPP53801 180 aa9.05□□□□□ -0.96
HDDC2-202ENST00000398153 PDZD11Q5EBL8 140 aa9.05□□□□□ -0.96
HDDC2-202ENST00000398153 Q8IZM0 81 aa9.05□□□□□ -0.96
HDDC2-202ENST00000398153 CDKN2A-AS1Q9UH64 79 aa9.05□□□□□ -0.96
HDDC2-202ENST00000398153 FAT1Q14517 4588 aa9.05□□□□□ -0.96
HDDC2-202ENST00000398153 TRGC2P03986 189 aa9.04□□□□□ -0.96
HDDC2-202ENST00000398153 STPG4Q8N801 248 aa9.04□□□□□ -0.96
HDDC2-202ENST00000398153 COLCA2A8K830 154 aa9.03□□□□□ -0.96
HDDC2-202ENST00000398153 C6orf226Q5I0X4 101 aa9.03□□□□□ -0.96
HDDC2-202ENST00000398153 LINC00469Q8N7U9 141 aa9.03□□□□□ -0.96
HDDC2-202ENST00000398153 C7orf33Q8WU49 177 aa9.03□□□□□ -0.96
HDDC2-202ENST00000398153 CXCL5P42830 114 aa9.02□□□□□ -0.97
HDDC2-202ENST00000398153 CKS1BP61024 79 aa9.02□□□□□ -0.97
HDDC2-202ENST00000398153 RPL37AP61513 92 aaKnown RBP9.02□□□□□ -0.97
HDDC2-202ENST00000398153 UNQ6190/PRO20217Q6UXQ8 127 aa9.02□□□□□ -0.97
HDDC2-202ENST00000398153 H3BRM9 83 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms