RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 Q96MF0 132 aa9.82□□□□□ -0.84
COL6A2-203ENST00000397763 C11orf68Q9H3H3 251 aaKnown RBP9.82□□□□□ -0.84
COL6A2-203ENST00000397763 Q6YL49 198 aa9.82□□□□□ -0.84
COL6A2-203ENST00000397763 NOP10Q9NPE3 64 aaKnown RBP9.82□□□□□ -0.84
COL6A2-203ENST00000397763 TIRAPP58753 221 aa9.82□□□□□ -0.84
COL6A2-203ENST00000397763 HERVK_113P63121 156 aa9.82□□□□□ -0.84
COL6A2-203ENST00000397763 DEFB114Q30KQ6 69 aa9.82□□□□□ -0.84
COL6A2-203ENST00000397763 ODF3L2Q3SX64 289 aa9.82□□□□□ -0.84
COL6A2-203ENST00000397763 C1orf158Q8N1D5 194 aa9.82□□□□□ -0.84
COL6A2-203ENST00000397763 SDIM1Q6ZPB5 146 aa9.81□□□□□ -0.84
COL6A2-203ENST00000397763 STHQ8IWL8 128 aa9.81□□□□□ -0.84
COL6A2-203ENST00000397763 IGKV3D-7A0A0C4DH55 119 aa9.81□□□□□ -0.84
COL6A2-203ENST00000397763 TMEM126AQ9H061 195 aa9.81□□□□□ -0.84
COL6A2-203ENST00000397763 LINC00643Q86TS7 51 aa9.8□□□□□ -0.84
COL6A2-203ENST00000397763 C3orf22Q8N5N4 141 aa9.8□□□□□ -0.84
COL6A2-203ENST00000397763 DEFB121Q5J5C9 76 aa9.8□□□□□ -0.84
COL6A2-203ENST00000397763 LINC01600Q96MT4 127 aa9.8□□□□□ -0.84
COL6A2-203ENST00000397763 CR1P17927 2039 aa9.79□□□□□ -0.84
COL6A2-203ENST00000397763 RPL35AP18077 110 aaKnown RBP9.79□□□□□ -0.84
COL6A2-203ENST00000397763 PEMTQ9UBM1 199 aa9.79□□□□□ -0.84
COL6A2-203ENST00000397763 USP24Q9UPU5 2620 aa9.79□□□□□ -0.84
COL6A2-203ENST00000397763 A0A096LNT2 108 aa9.78□□□□□ -0.84
COL6A2-203ENST00000397763 HIVEP2P31629 2446 aa9.78□□□□□ -0.84
COL6A2-203ENST00000397763 ACYP1P07311 99 aa9.78□□□□□ -0.84
COL6A2-203ENST00000397763 RPL36AP83881 106 aaKnown RBP9.78□□□□□ -0.84
COL6A2-203ENST00000397763 RPL36ALQ969Q0 106 aaKnown RBP9.78□□□□□ -0.84
COL6A2-203ENST00000397763 C14orf132Q9NPU4 83 aa9.78□□□□□ -0.84
COL6A2-203ENST00000397763 hADV29S1A0JD25 119 aa9.78□□□□□ -0.84
COL6A2-203ENST00000397763 IGHV4-31P0DP07 118 aa9.78□□□□□ -0.84
COL6A2-203ENST00000397763 IGLV5-39A0A0G2JS06 123 aa9.77□□□□□ -0.85
COL6A2-203ENST00000397763 ATP5G1P05496 136 aa9.77□□□□□ -0.85
COL6A2-203ENST00000397763 PFN2P35080 140 aa9.77□□□□□ -0.85
COL6A2-203ENST00000397763 BEAN1Q3B7T3 259 aa9.77□□□□□ -0.85
COL6A2-203ENST00000397763 TRGV2A0A075B6R0 118 aa9.77□□□□□ -0.85
COL6A2-203ENST00000397763 DNAL4O96015 105 aa9.77□□□□□ -0.85
COL6A2-203ENST00000397763 IGLV5-45A0A087WSX0 123 aa9.76□□□□□ -0.85
COL6A2-203ENST00000397763 A0A087WVE0 104 aa9.76□□□□□ -0.85
COL6A2-203ENST00000397763 UBE2L6O14933 153 aa9.76□□□□□ -0.85
COL6A2-203ENST00000397763 UQCRQO14949 82 aa9.76□□□□□ -0.85
COL6A2-203ENST00000397763 C9orf129Q5T035 196 aaKnown RBP9.76□□□□□ -0.85
COL6A2-203ENST00000397763 MIR7-3HGQ8N6C7 128 aa9.76□□□□□ -0.85
COL6A2-203ENST00000397763 K7EQD1 137 aa9.76□□□□□ -0.85
COL6A2-203ENST00000397763 TIMM17BO60830 172 aa9.76□□□□□ -0.85
COL6A2-203ENST00000397763 DNAJC30Q96LL9 226 aa9.76□□□□□ -0.85
COL6A2-203ENST00000397763 CDC42SE2Q9NRR3 84 aa9.76□□□□□ -0.85
COL6A2-203ENST00000397763 RNF152Q8N8N0 203 aa9.76□□□□□ -0.85
COL6A2-203ENST00000397763 C5orf38Q86SI9 138 aa9.75□□□□□ -0.85
COL6A2-203ENST00000397763 F5H768 121 aa9.75□□□□□ -0.85
COL6A2-203ENST00000397763 CRPP02741 224 aa9.75□□□□□ -0.85
COL6A2-203ENST00000397763 LINC00158P58513 81 aa9.75□□□□□ -0.85
COL6A2-203ENST00000397763 LINC00337Q8N6G1 96 aa9.74□□□□□ -0.85
COL6A2-203ENST00000397763 IMUPQ9GZP8 106 aa9.74□□□□□ -0.85
COL6A2-203ENST00000397763 NOTCH2Q04721 2471 aa9.74□□□□□ -0.85
COL6A2-203ENST00000397763 IGLV4-60A0A075B6I1 120 aa9.73□□□□□ -0.85
COL6A2-203ENST00000397763 SLPIP03973 132 aa9.73□□□□□ -0.85
COL6A2-203ENST00000397763 MALP21145 153 aa9.73□□□□□ -0.85
COL6A2-203ENST00000397763 CLPSL2Q6UWE3 100 aa9.73□□□□□ -0.85
COL6A2-203ENST00000397763 OR13C6PQ8NH95 151 aa9.73□□□□□ -0.85
COL6A2-203ENST00000397763 A0A087WYN8 130 aa9.73□□□□□ -0.85
COL6A2-203ENST00000397763 A8MTW9 85 aa9.73□□□□□ -0.85
COL6A2-203ENST00000397763 CYSTM1Q9H1C7 97 aa9.73□□□□□ -0.85
COL6A2-203ENST00000397763 C22orf24Q9Y442 160 aa9.73□□□□□ -0.85
COL6A2-203ENST00000397763 C4orf3Q8WVX3 66 aa9.73□□□□□ -0.85
COL6A2-203ENST00000397763 A0A1B0GX51 115 aa9.72□□□□□ -0.85
COL6A2-203ENST00000397763 TRACP01848 142 aa9.72□□□□□ -0.85
COL6A2-203ENST00000397763 A0A096LPF7 62 aa9.72□□□□□ -0.85
COL6A2-203ENST00000397763 INAFM2P0DMQ5 153 aa9.72□□□□□ -0.85
COL6A2-203ENST00000397763 DSCR9P59020 149 aa9.72□□□□□ -0.85
COL6A2-203ENST00000397763 LINC00526Q96FQ7 95 aa9.72□□□□□ -0.85
COL6A2-203ENST00000397763 SND1-IT1Q9HBX3 110 aa9.71□□□□□ -0.85
COL6A2-203ENST00000397763 COX7CP15954 63 aa9.71□□□□□ -0.85
COL6A2-203ENST00000397763 TMEM243Q9BU79 118 aa9.71□□□□□ -0.85
COL6A2-203ENST00000397763 CSDC2Q9Y534 153 aaKnown RBP9.71□□□□□ -0.85
COL6A2-203ENST00000397763 VWFP04275 2813 aa9.71□□□□□ -0.86
COL6A2-203ENST00000397763 J3QLI3 93 aa9.71□□□□□ -0.86
COL6A2-203ENST00000397763 NCR3O14931 201 aa9.71□□□□□ -0.86
COL6A2-203ENST00000397763 C5orf47Q569G3 176 aa9.71□□□□□ -0.86
COL6A2-203ENST00000397763 HIST2H2BCQ6DN03 193 aa9.71□□□□□ -0.86
COL6A2-203ENST00000397763 IGKV2-28A0A075B6P5 120 aa9.7□□□□□ -0.86
COL6A2-203ENST00000397763 IGKV2D-28P01615 120 aa9.7□□□□□ -0.86
COL6A2-203ENST00000397763 HIST1H4AP62805 103 aaKnown RBP9.7□□□□□ -0.86
COL6A2-203ENST00000397763 FAM19A5Q7Z5A7 132 aaPredicted RBP9.7□□□□□ -0.86
COL6A2-203ENST00000397763 TRGV4A0A0C4DH28 118 aa9.7□□□□□ -0.86
COL6A2-203ENST00000397763 LECT2O14960 151 aa9.7□□□□□ -0.86
COL6A2-203ENST00000397763 ITPR2Q14571 2701 aa9.7□□□□□ -0.86
COL6A2-203ENST00000397763 RNASE1P07998 156 aaKnown RBP9.69□□□□□ -0.86
COL6A2-203ENST00000397763 COPS9Q8WXC6 57 aa9.69□□□□□ -0.86
COL6A2-203ENST00000397763 DEFB130BP0DP73 79 aa9.69□□□□□ -0.86
COL6A2-203ENST00000397763 DEFB130AP0DP74 79 aa9.69□□□□□ -0.86
COL6A2-203ENST00000397763 KIR2DL5BQ8NHK3 375 aa9.69□□□□□ -0.86
COL6A2-203ENST00000397763 COX7B2Q8TF08 81 aa9.69□□□□□ -0.86
COL6A2-203ENST00000397763 CCL24O00175 119 aa9.69□□□□□ -0.86
COL6A2-203ENST00000397763 SMIM11BQ8TCY0 68 aa9.69□□□□□ -0.86
COL6A2-203ENST00000397763 PAX4O43316 350 aa9.68□□□□□ -0.86
COL6A2-203ENST00000397763 FSHBP01225 129 aa9.68□□□□□ -0.86
COL6A2-203ENST00000397763 PRR3P79522 188 aaKnown RBP9.68□□□□□ -0.86
COL6A2-203ENST00000397763 LINC00846Q9NV44 126 aa9.68□□□□□ -0.86
COL6A2-203ENST00000397763 J3KT08 172 aa9.68□□□□□ -0.86
COL6A2-203ENST00000397763 GIG44P09565 113 aaPredicted RBP9.68□□□□□ -0.86
COL6A2-203ENST00000397763 TRAV25A0A0B4J276 109 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms