RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 NRACQ8N912 160 aa11.09□□□□□ -0.63
LSS-202ENST00000397728 COL27A1Q8IZC6 1860 aaPredicted RBP11.09□□□□□ -0.63
LSS-202ENST00000397728 AKAP13Q12802 2813 aa11.09□□□□□ -0.63
LSS-202ENST00000397728 ACYP1P07311 99 aa11.08□□□□□ -0.64
LSS-202ENST00000397728 POLR2KP53803 58 aaKnown RBP11.08□□□□□ -0.64
LSS-202ENST00000397728 HIGD2AQ9BW72 106 aa11.08□□□□□ -0.64
LSS-202ENST00000397728 CD164L2Q6UWJ8 174 aa11.08□□□□□ -0.64
LSS-202ENST00000397728 ZNF22P17026 224 aaPredicted RBP11.07□□□□□ -0.64
LSS-202ENST00000397728 A0A096LNT2 108 aa11.07□□□□□ -0.64
LSS-202ENST00000397728 C4orf48Q5BLP8 95 aa11.07□□□□□ -0.64
LSS-202ENST00000397728 HIGD1BQ9P298 99 aa11.07□□□□□ -0.64
LSS-202ENST00000397728 DIRC1Q969H9 104 aa11.06□□□□□ -0.64
LSS-202ENST00000397728 ORMDL1Q9P0S3 153 aa11.06□□□□□ -0.64
LSS-202ENST00000397728 LINC00959A0A1B0GUT2 108 aa11.06□□□□□ -0.64
LSS-202ENST00000397728 HAMPP81172 84 aa11.06□□□□□ -0.64
LSS-202ENST00000397728 FHL2Q14192 279 aa11.06□□□□□ -0.64
LSS-202ENST00000397728 FAM19A5Q7Z5A7 132 aaPredicted RBP11.06□□□□□ -0.64
LSS-202ENST00000397728 TRACP01848 142 aa11.05□□□□□ -0.64
LSS-202ENST00000397728 CNFNQ9BYD5 112 aa11.05□□□□□ -0.64
LSS-202ENST00000397728 PYGO1Q9Y3Y4 419 aa11.05□□□□□ -0.64
LSS-202ENST00000397728 CHD6Q8TD26 2715 aa11.05□□□□□ -0.64
LSS-202ENST00000397728 H0YGX0 51 aa11.05□□□□□ -0.64
LSS-202ENST00000397728 BAHCC1Q9P281 2608 aa11.05□□□□□ -0.64
LSS-202ENST00000397728 IGSF10Q6WRI0 2623 aa11.04□□□□□ -0.64
LSS-202ENST00000397728 H3BMG7 143 aa11.04□□□□□ -0.64
LSS-202ENST00000397728 UBE2D4Q9Y2X8 147 aa11.03□□□□□ -0.64
LSS-202ENST00000397728 TAX1BP3O14907 124 aa11.03□□□□□ -0.64
LSS-202ENST00000397728 SPATA12Q7Z6I5 190 aa11.03□□□□□ -0.64
LSS-202ENST00000397728 BAALC-AS2P0C853 105 aa11.03□□□□□ -0.64
LSS-202ENST00000397728 CFAP54Q96N23 3096 aa11.02□□□□□ -0.65
LSS-202ENST00000397728 A0A0J9YXY3 114 aa11.02□□□□□ -0.65
LSS-202ENST00000397728 UBL5Q9BZL1 73 aa11.02□□□□□ -0.65
LSS-202ENST00000397728 FXYD2P54710 66 aa11.02□□□□□ -0.65
LSS-202ENST00000397728 SZT2Q5T011 3432 aa11.02□□□□□ -0.65
LSS-202ENST00000397728 B9D2Q9BPU9 175 aa11.01□□□□□ -0.65
LSS-202ENST00000397728 A8MZ25 164 aa11.01□□□□□ -0.65
LSS-202ENST00000397728 C7orf33Q8WU49 177 aa11.01□□□□□ -0.65
LSS-202ENST00000397728 SBSPONQ8IVN8 264 aa11.01□□□□□ -0.65
LSS-202ENST00000397728 STAB1Q9NY15 2570 aa11□□□□□ -0.65
LSS-202ENST00000397728 FAM19A1Q7Z5A9 133 aa10.99□□□□□ -0.65
LSS-202ENST00000397728 CDC42SE2Q9NRR3 84 aa10.99□□□□□ -0.65
LSS-202ENST00000397728 MUC4Q99102 2169 aa10.99□□□□□ -0.65
LSS-202ENST00000397728 MAP1AP78559 2803 aaPredicted RBP10.99□□□□□ -0.65
LSS-202ENST00000397728 hADV29S1A0JD25 119 aa10.99□□□□□ -0.65
LSS-202ENST00000397728 CELA1Q9UNI1 258 aa10.99□□□□□ -0.65
LSS-202ENST00000397728 TMEM223A0PJW6 202 aa10.99□□□□□ -0.65
LSS-202ENST00000397728 FUSP35637 526 aaKnown RBP eCLIP10.99□□□□□ -0.656e-7■■■□□ 18.3
LSS-202ENST00000397728 IBA57-AS1B1ANH7 110 aa10.98□□□□□ -0.65
LSS-202ENST00000397728 B5MCH6 92 aa10.98□□□□□ -0.65
LSS-202ENST00000397728 RBMY1FQ15415 496 aaKnown RBP10.98□□□□□ -0.65
LSS-202ENST00000397728 IGLV4-69A0A075B6H9 119 aa10.98□□□□□ -0.65
LSS-202ENST00000397728 A0A096LNI7 61 aa10.98□□□□□ -0.65
LSS-202ENST00000397728 SS18L2Q9UHA2 77 aa10.98□□□□□ -0.65
LSS-202ENST00000397728 J3KT08 172 aa10.98□□□□□ -0.65
LSS-202ENST00000397728 COX7BP24311 80 aa10.98□□□□□ -0.65
LSS-202ENST00000397728 CHCHD7Q9BUK0 85 aa10.97□□□□□ -0.65
LSS-202ENST00000397728 TEN1Q86WV5 123 aa10.97□□□□□ -0.65
LSS-202ENST00000397728 KRTAP1-3Q8IUG1 177 aa10.97□□□□□ -0.65
LSS-202ENST00000397728 ANKRD29Q8N6D5 301 aa10.97□□□□□ -0.65
LSS-202ENST00000397728 MRPS36P82909 103 aaKnown RBP10.97□□□□□ -0.65
LSS-202ENST00000397728 UNC79Q9P2D8 2635 aa10.97□□□□□ -0.65
LSS-202ENST00000397728 NTN5Q8WTR8 489 aaPredicted RBP10.96□□□□□ -0.65
LSS-202ENST00000397728 Q6ZSN1 163 aa10.96□□□□□ -0.65
LSS-202ENST00000397728 WFDC10BQ8IUB3 73 aa10.96□□□□□ -0.65
LSS-202ENST00000397728 COX8CQ7Z4L0 72 aa10.96□□□□□ -0.66
LSS-202ENST00000397728 IGLV4-60A0A075B6I1 120 aa10.95□□□□□ -0.66
LSS-202ENST00000397728 WFDC9Q8NEX5 89 aa10.95□□□□□ -0.66
LSS-202ENST00000397728 YPEL4Q96NS1 127 aa10.95□□□□□ -0.66
LSS-202ENST00000397728 LYPD5Q6UWN5 251 aa10.95□□□□□ -0.66
LSS-202ENST00000397728 LINC00694P0DN24 101 aa10.94□□□□□ -0.66
LSS-202ENST00000397728 IGKV2-28A0A075B6P5 120 aa10.94□□□□□ -0.66
LSS-202ENST00000397728 IGKV2D-28P01615 120 aa10.94□□□□□ -0.66
LSS-202ENST00000397728 UBE2D1P51668 147 aa10.94□□□□□ -0.66
LSS-202ENST00000397728 C1orf134Q5TEV5 83 aa10.93□□□□□ -0.66
LSS-202ENST00000397728 CYSRT1A8MQ03 144 aa10.92□□□□□ -0.66
LSS-202ENST00000397728 FOXI1Q12951 378 aa10.92□□□□□ -0.66
LSS-202ENST00000397728 SMIM20Q8N5G0 67 aa10.92□□□□□ -0.66
LSS-202ENST00000397728 LOC107984640A0A0U1RRK4 108 aa10.92□□□□□ -0.66
LSS-202ENST00000397728 COL6A5A8TX70 2615 aa10.92□□□□□ -0.66
LSS-202ENST00000397728 VPS13AQ96RL7 3174 aa10.92□□□□□ -0.66
LSS-202ENST00000397728 ATOX1O00244 68 aa10.92□□□□□ -0.66
LSS-202ENST00000397728 TMEM258P61165 79 aa10.92□□□□□ -0.66
LSS-202ENST00000397728 CLEC2BQ92478 149 aa10.92□□□□□ -0.66
LSS-202ENST00000397728 C11orf72Q8NBR9 251 aa10.91□□□□□ -0.66
LSS-202ENST00000397728 IGKV2D-26A0A0A0MRZ7 120 aa10.91□□□□□ -0.66
LSS-202ENST00000397728 LINC00308Q8TCZ7 52 aa10.91□□□□□ -0.66
LSS-202ENST00000397728 LINC00242Q5T6M2 205 aa10.91□□□□□ -0.66
LSS-202ENST00000397728 TEX15Q9BXT5 2789 aa10.9□□□□□ -0.66
LSS-202ENST00000397728 NDUFS5O43920 106 aa10.9□□□□□ -0.66
LSS-202ENST00000397728 USP17L23D6RBM5 183 aa10.9□□□□□ -0.67
LSS-202ENST00000397728 UNQ6190/PRO20217Q6UXQ8 127 aa10.89□□□□□ -0.67
LSS-202ENST00000397728 IGIPA6NJ69 53 aa10.89□□□□□ -0.67
LSS-202ENST00000397728 MDFIQ99750 246 aa10.89□□□□□ -0.67
LSS-202ENST00000397728 IGLV5-52A0A0A0MRZ9 124 aa10.88□□□□□ -0.67
LSS-202ENST00000397728 KRTAP1-1Q07627 177 aa10.88□□□□□ -0.67
LSS-202ENST00000397728 LINC01620Q4KN68 170 aa10.88□□□□□ -0.67
LSS-202ENST00000397728 MAPKAPK5-AS1Q8N8E1 139 aa10.88□□□□□ -0.67
LSS-202ENST00000397728 X6R8D5 127 aa10.88□□□□□ -0.67
LSS-202ENST00000397728 COL6A3P12111 3177 aa10.87□□□□□ -0.67
LSS-202ENST00000397728 NDUFC2O95298 119 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms