RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 DLEU1O43261 78 aa5.87□□□□□ -1.47
PTPRD-204ENST00000397606 HIGD2BQ4VC39 106 aa5.87□□□□□ -1.47
PTPRD-204ENST00000397606 LY6G6CO95867 125 aa5.87□□□□□ -1.47
PTPRD-204ENST00000397606 A0A1B0GV90 55 aa5.86□□□□□ -1.47
PTPRD-204ENST00000397606 SND1-IT1Q9HBX3 110 aa5.86□□□□□ -1.47
PTPRD-204ENST00000397606 HIGD1BQ9P298 99 aa5.86□□□□□ -1.47
PTPRD-204ENST00000397606 IGIPA6NJ69 53 aa5.86□□□□□ -1.47
PTPRD-204ENST00000397606 GAGE2BQ13066 116 aa5.86□□□□□ -1.47
PTPRD-204ENST00000397606 B9D2Q9BPU9 175 aa5.86□□□□□ -1.47
PTPRD-204ENST00000397606 CSDC2Q9Y534 153 aaKnown RBP5.86□□□□□ -1.47
PTPRD-204ENST00000397606 ADGRG4Q8IZF6 3080 aa5.86□□□□□ -1.47
PTPRD-204ENST00000397606 BVES-AS1Q5T3Y7 98 aa5.86□□□□□ -1.47
PTPRD-204ENST00000397606 TTTY13Q9BZ97 58 aa5.86□□□□□ -1.47
PTPRD-204ENST00000397606 C19orf73Q9NVV2 129 aa5.86□□□□□ -1.47
PTPRD-204ENST00000397606 TMEM223A0PJW6 202 aa5.85□□□□□ -1.47
PTPRD-204ENST00000397606 CDPF1Q6NVV7 123 aa5.85□□□□□ -1.47
PTPRD-204ENST00000397606 Q8NAQ8 132 aa5.85□□□□□ -1.47
PTPRD-204ENST00000397606 NAA38Q9BRA0 125 aaKnown RBP5.85□□□□□ -1.47
PTPRD-204ENST00000397606 KRTAP10-11P60412 298 aa5.85□□□□□ -1.47
PTPRD-204ENST00000397606 UFSP1Q6NVU6 142 aa5.85□□□□□ -1.47
PTPRD-204ENST00000397606 USP34Q70CQ2 3546 aa5.85□□□□□ -1.47
PTPRD-204ENST00000397606 UBE2D1P51668 147 aa5.85□□□□□ -1.47
PTPRD-204ENST00000397606 LINC00315P59091 139 aa5.85□□□□□ -1.47
PTPRD-204ENST00000397606 LYPD5Q6UWN5 251 aa5.85□□□□□ -1.47
PTPRD-204ENST00000397606 EGFEM1PQ0D2K5 195 aa5.84□□□□□ -1.47
PTPRD-204ENST00000397606 MIR7-3HGQ8N6C7 128 aa5.84□□□□□ -1.47
PTPRD-204ENST00000397606 POM121L12Q8N7R1 296 aa5.84□□□□□ -1.47
PTPRD-204ENST00000397606 MUC3AQ02505 3323 aa5.84□□□□□ -1.47
PTPRD-204ENST00000397606 H3BNG1 76 aa5.84□□□□□ -1.47
PTPRD-204ENST00000397606 MUSTN1Q8IVN3 82 aa5.84□□□□□ -1.47
PTPRD-204ENST00000397606 URB1-AS1Q96HZ7 61 aa5.84□□□□□ -1.47
PTPRD-204ENST00000397606 ITPR1Q14643 2758 aa5.84□□□□□ -1.47
PTPRD-204ENST00000397606 A0A1B0GUV1 79 aa5.84□□□□□ -1.48
PTPRD-204ENST00000397606 F8WEM9 126 aa5.84□□□□□ -1.48
PTPRD-204ENST00000397606 CSNK1G2-AS1Q8NCQ2 148 aa5.84□□□□□ -1.48
PTPRD-204ENST00000397606 A8MZ25 164 aa5.83□□□□□ -1.48
PTPRD-204ENST00000397606 K7EIL1 84 aa5.83□□□□□ -1.48
PTPRD-204ENST00000397606 MDFIQ99750 246 aa5.83□□□□□ -1.48
PTPRD-204ENST00000397606 MYO15AQ9UKN7 3530 aa5.83□□□□□ -1.48
PTPRD-204ENST00000397606 TRBV20-1A0A075B6N2 111 aa5.83□□□□□ -1.48
PTPRD-204ENST00000397606 M0R2N4 97 aa5.83□□□□□ -1.48
PTPRD-204ENST00000397606 SYCNQ0VAF6 134 aa5.83□□□□□ -1.48
PTPRD-204ENST00000397606 TEX15Q9BXT5 2789 aa5.83□□□□□ -1.48
PTPRD-204ENST00000397606 DAND5Q8N907 189 aa5.83□□□□□ -1.48
PTPRD-204ENST00000397606 A4D1N5 150 aa5.82□□□□□ -1.48
PTPRD-204ENST00000397606 IBA57-AS1B1ANH7 110 aa5.82□□□□□ -1.48
PTPRD-204ENST00000397606 LINC00694P0DN24 101 aa5.82□□□□□ -1.48
PTPRD-204ENST00000397606 LINC00310P59036 64 aa5.82□□□□□ -1.48
PTPRD-204ENST00000397606 SNHG12Q9BXW3 62 aa5.82□□□□□ -1.48
PTPRD-204ENST00000397606 LAMTOR3Q9UHA4 124 aa5.82□□□□□ -1.48
PTPRD-204ENST00000397606 A0A0J9YXY3 114 aa5.82□□□□□ -1.48
PTPRD-204ENST00000397606 CFC1BP0CG36 223 aa5.82□□□□□ -1.48
PTPRD-204ENST00000397606 CFC1P0CG37 223 aa5.82□□□□□ -1.48
PTPRD-204ENST00000397606 CARD19Q96LW7 228 aa5.82□□□□□ -1.48
PTPRD-204ENST00000397606 ITPR2Q14571 2701 aa5.82□□□□□ -1.48
PTPRD-204ENST00000397606 NBEAQ8NFP9 2946 aa5.82□□□□□ -1.48
PTPRD-204ENST00000397606 MUC4Q99102 2169 aa5.82□□□□□ -1.48
PTPRD-204ENST00000397606 IGLV4-60A0A075B6I1 120 aa5.82□□□□□ -1.48
PTPRD-204ENST00000397606 TSPAN13O95857 204 aa5.82□□□□□ -1.48
PTPRD-204ENST00000397606 LINC00242Q5T6M2 205 aa5.82□□□□□ -1.48
PTPRD-204ENST00000397606 UBR5O95071 2799 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-204ENST00000397606 COL6A5A8TX70 2615 aa5.81□□□□□ -1.48
PTPRD-204ENST00000397606 C9orf118A6NHY6 69 aa5.81□□□□□ -1.48
PTPRD-204ENST00000397606 ETDCA0A1B0GVM5 59 aa5.81□□□□□ -1.48
PTPRD-204ENST00000397606 C2orf82Q6UX34 121 aa5.81□□□□□ -1.48
PTPRD-204ENST00000397606 LOC400499M0QZD8 3231 aa5.8□□□□□ -1.48
PTPRD-204ENST00000397606 STAB1Q9NY15 2570 aa5.8□□□□□ -1.48
PTPRD-204ENST00000397606 WFDC10BQ8IUB3 73 aa5.8□□□□□ -1.48
PTPRD-204ENST00000397606 IGKV2-24A0A0C4DH68 120 aa5.8□□□□□ -1.48
PTPRD-204ENST00000397606 AMELXQ99217 191 aa5.8□□□□□ -1.48
PTPRD-204ENST00000397606 K7ERJ3 54 aa5.8□□□□□ -1.48
PTPRD-204ENST00000397606 GIG44P09565 113 aaPredicted RBP5.8□□□□□ -1.48
PTPRD-204ENST00000397606 TMEM126AQ9H061 195 aa5.8□□□□□ -1.48
PTPRD-204ENST00000397606 ZZEF1O43149 2961 aa5.8□□□□□ -1.48
PTPRD-204ENST00000397606 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.8□□□□□ -1.48
PTPRD-204ENST00000397606 IGLV4-69A0A075B6H9 119 aa5.79□□□□□ -1.48
PTPRD-204ENST00000397606 Q8IZM0 81 aa5.79□□□□□ -1.48
PTPRD-204ENST00000397606 SPANXCQ9NY87 97 aa5.79□□□□□ -1.48
PTPRD-204ENST00000397606 A0A096LNJ9 63 aa5.79□□□□□ -1.48
PTPRD-204ENST00000397606 C9JAW5 83 aa5.79□□□□□ -1.48
PTPRD-204ENST00000397606 K7EP13 123 aa5.79□□□□□ -1.48
PTPRD-204ENST00000397606 LECT2O14960 151 aa5.79□□□□□ -1.48
PTPRD-204ENST00000397606 WIPF1O43516 503 aa5.79□□□□□ -1.48
PTPRD-204ENST00000397606 A0A087WZ39 114 aa5.79□□□□□ -1.48
PTPRD-204ENST00000397606 H0YGX0 51 aa5.79□□□□□ -1.48
PTPRD-204ENST00000397606 IGKV2D-26A0A0A0MRZ7 120 aa5.78□□□□□ -1.48
PTPRD-204ENST00000397606 UTP20O75691 2785 aaKnown RBP5.78□□□□□ -1.48
PTPRD-204ENST00000397606 NCR3O14931 201 aa5.78□□□□□ -1.48
PTPRD-204ENST00000397606 FXYD2P54710 66 aa5.78□□□□□ -1.48
PTPRD-204ENST00000397606 ESRGQ1W209 222 aa5.77□□□□□ -1.48
PTPRD-204ENST00000397606 APCP25054 2843 aa5.77□□□□□ -1.49
PTPRD-204ENST00000397606 TIMM17BO60830 172 aa5.77□□□□□ -1.49
PTPRD-204ENST00000397606 LINC01556Q5JQF7 62 aa5.77□□□□□ -1.49
PTPRD-204ENST00000397606 NTM-AS1Q6ZSK4 140 aa5.77□□□□□ -1.49
PTPRD-204ENST00000397606 MUC7Q8TAX7 377 aa5.77□□□□□ -1.49
PTPRD-204ENST00000397606 LINC01546A6NGU7 62 aa5.77□□□□□ -1.49
PTPRD-204ENST00000397606 A0A1W2PPM0 123 aa5.77□□□□□ -1.49
PTPRD-204ENST00000397606 SPANXB1Q9NS25 103 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-204ENST00000397606 SMIM1B2RUZ4 78 aa5.76□□□□□ -1.49
PTPRD-204ENST00000397606 MAPKAPK5-AS1Q8N8E1 139 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms