RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 SPTSSAQ969W0 71 aa4.46□□□□□ -1.7
SMCO1-201ENST00000397537 ZNF355PQ9NSJ1 428 aa4.46□□□□□ -1.7
SMCO1-201ENST00000397537 ARHGAP21Q5T5U3 1957 aa4.46□□□□□ -1.7
SMCO1-201ENST00000397537 PLXNB1O43157 2135 aa4.45□□□□□ -1.7
SMCO1-201ENST00000397537 TRBV7-3A0A075B6L6 115 aa4.45□□□□□ -1.7
SMCO1-201ENST00000397537 IGKV1OR2-108A0A075B7D4 117 aa4.45□□□□□ -1.7
SMCO1-201ENST00000397537 A0A0B4J2C4 111 aa4.45□□□□□ -1.7
SMCO1-201ENST00000397537 FAM168BA1KXE4 195 aa4.45□□□□□ -1.7
SMCO1-201ENST00000397537 CCKP06307 115 aa4.45□□□□□ -1.7
SMCO1-201ENST00000397537 UBE2D1P51668 147 aa4.45□□□□□ -1.7
SMCO1-201ENST00000397537 SLC50A1Q9BRV3 221 aa4.45□□□□□ -1.7
SMCO1-201ENST00000397537 ICOSQ9Y6W8 199 aa4.45□□□□□ -1.7
SMCO1-201ENST00000397537 KRTAP1-1Q07627 177 aa4.44□□□□□ -1.7
SMCO1-201ENST00000397537 MIAQ16674 131 aa4.44□□□□□ -1.7
SMCO1-201ENST00000397537 TAS2R4Q9NYW5 299 aa4.44□□□□□ -1.7
SMCO1-201ENST00000397537 VPS13CQ709C8 3753 aa4.44□□□□□ -1.7
SMCO1-201ENST00000397537 TRPM6Q9BX84 2022 aa4.44□□□□□ -1.7
SMCO1-201ENST00000397537 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.44□□□□□ -1.7
SMCO1-201ENST00000397537 TRAV3A0A0B4J244 114 aa4.44□□□□□ -1.7
SMCO1-201ENST00000397537 A0A1W2PQD3 144 aa4.44□□□□□ -1.7
SMCO1-201ENST00000397537 LINC01549A6NIU2 74 aa4.44□□□□□ -1.7
SMCO1-201ENST00000397537 IBA57-AS1B1ANH7 110 aa4.44□□□□□ -1.7
SMCO1-201ENST00000397537 IGKV2-30P06310 120 aa4.44□□□□□ -1.7
SMCO1-201ENST00000397537 IFI6P09912 130 aa4.44□□□□□ -1.7
SMCO1-201ENST00000397537 FAM229BQ4G0N7 80 aa4.44□□□□□ -1.7
SMCO1-201ENST00000397537 NDUFA11Q86Y39 141 aa4.44□□□□□ -1.7
SMCO1-201ENST00000397537 KMT2CQ8NEZ4 4911 aaKnown RBP4.43□□□□□ -1.7
SMCO1-201ENST00000397537 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.43□□□□□ -1.7
SMCO1-201ENST00000397537 RBM3P98179 157 aaKnown RBP4.43□□□□□ -1.7
SMCO1-201ENST00000397537 UNC13CQ8NB66 2214 aa4.42□□□□□ -1.7
SMCO1-201ENST00000397537 ZNF407Q9C0G0 2248 aa4.42□□□□□ -1.7
SMCO1-201ENST00000397537 LHBP01229 141 aa4.42□□□□□ -1.7
SMCO1-201ENST00000397537 FUSP35637 526 aaKnown RBP eCLIP4.42□□□□□ -1.7
SMCO1-201ENST00000397537 IGKV1D-37A0A075B6S9 117 aa4.42□□□□□ -1.7
SMCO1-201ENST00000397537 CCL4P13236 92 aa4.42□□□□□ -1.7
SMCO1-201ENST00000397537 IFI27P40305 119 aaPredicted RBP4.42□□□□□ -1.7
SMCO1-201ENST00000397537 CIRBPQ14011 172 aaKnown RBP4.42□□□□□ -1.7
SMCO1-201ENST00000397537 SLC48A1Q6P1K1 146 aa4.42□□□□□ -1.7
SMCO1-201ENST00000397537 ZGRF1Q86YA3 2104 aa4.41□□□□□ -1.7
SMCO1-201ENST00000397537 SCN3AQ9NY46 2000 aa4.41□□□□□ -1.7
SMCO1-201ENST00000397537 MYO7BQ6PIF6 2116 aa4.41□□□□□ -1.7
SMCO1-201ENST00000397537 NCOA6Q14686 2063 aaPredicted RBP4.41□□□□□ -1.7
SMCO1-201ENST00000397537 IGHV3-73A0A0B4J1V6 119 aa4.41□□□□□ -1.7
SMCO1-201ENST00000397537 TEX49A0A1B0GTD5 131 aa4.41□□□□□ -1.7
SMCO1-201ENST00000397537 RPL28P46779 137 aaKnown RBP4.41□□□□□ -1.7
SMCO1-201ENST00000397537 BLCAPP62952 87 aa4.41□□□□□ -1.7
SMCO1-201ENST00000397537 KLKP1Q107X0 134 aa4.41□□□□□ -1.7
SMCO1-201ENST00000397537 DEFB133Q30KQ1 61 aa4.41□□□□□ -1.7
SMCO1-201ENST00000397537 C2orf82Q6UX34 121 aa4.41□□□□□ -1.7
SMCO1-201ENST00000397537 FAM216BQ8N7L0 139 aa4.41□□□□□ -1.7
SMCO1-201ENST00000397537 Q8NDZ9 215 aa4.41□□□□□ -1.7
SMCO1-201ENST00000397537 C1orf64Q8NEQ6 169 aa4.41□□□□□ -1.7
SMCO1-201ENST00000397537 BIRC6Q9NR09 4857 aa4.4□□□□□ -1.7
SMCO1-201ENST00000397537 TRBV7-1A0A0A6YYK4 115 aa4.4□□□□□ -1.7
SMCO1-201ENST00000397537 TRAV13-2A0A0B4J235 113 aa4.4□□□□□ -1.7
SMCO1-201ENST00000397537 A6NN06 94 aa4.4□□□□□ -1.7
SMCO1-201ENST00000397537 FCER1GP30273 86 aa4.4□□□□□ -1.7
SMCO1-201ENST00000397537 XCL1P47992 114 aa4.4□□□□□ -1.7
SMCO1-201ENST00000397537 Q6JHZ5 121 aa4.4□□□□□ -1.7
SMCO1-201ENST00000397537 CLECL1Q8IZS7 167 aa4.4□□□□□ -1.7
SMCO1-201ENST00000397537 MUC7Q8TAX7 377 aa4.4□□□□□ -1.7
SMCO1-201ENST00000397537 HIVEP2P31629 2446 aa4.4□□□□□ -1.71
SMCO1-201ENST00000397537 IGHV3-15A0A0B4J1V0 119 aa4.39□□□□□ -1.71
SMCO1-201ENST00000397537 E7EQL1 145 aa4.39□□□□□ -1.71
SMCO1-201ENST00000397537 H7BZZ5 65 aa4.39□□□□□ -1.71
SMCO1-201ENST00000397537 CRIP2P52943 208 aaPredicted RBP4.39□□□□□ -1.71
SMCO1-201ENST00000397537 ATP11AUNQ6ZP68 121 aa4.39□□□□□ -1.71
SMCO1-201ENST00000397537 Q6ZR03 302 aa4.39□□□□□ -1.71
SMCO1-201ENST00000397537 DYNLRB2Q8TF09 96 aa4.39□□□□□ -1.71
SMCO1-201ENST00000397537 MRPL35Q9NZE8 188 aaKnown RBP4.39□□□□□ -1.71
SMCO1-201ENST00000397537 KIAA2026Q5HYC2 2103 aa4.39□□□□□ -1.71
SMCO1-201ENST00000397537 TANC2Q9HCD6 1990 aa4.39□□□□□ -1.71
SMCO1-201ENST00000397537 DOCK11Q5JSL3 2073 aa4.39□□□□□ -1.71
SMCO1-201ENST00000397537 C17orf98A8MV24 154 aa4.39□□□□□ -1.71
SMCO1-201ENST00000397537 IQCF6A8MYZ5 107 aa4.39□□□□□ -1.71
SMCO1-201ENST00000397537 RHOHQ15669 191 aa4.39□□□□□ -1.71
SMCO1-201ENST00000397537 Q1T7F1 81 aa4.39□□□□□ -1.71
SMCO1-201ENST00000397537 HIGD2BQ4VC39 106 aa4.39□□□□□ -1.71
SMCO1-201ENST00000397537 LYZL2Q7Z4W2 148 aa4.39□□□□□ -1.71
SMCO1-201ENST00000397537 SPANXA2-OT1Q8N9U9 137 aa4.39□□□□□ -1.71
SMCO1-201ENST00000397537 LINC00474Q9P2X8 69 aa4.39□□□□□ -1.71
SMCO1-201ENST00000397537 SONP18583 2426 aaKnown RBP4.39□□□□□ -1.71
SMCO1-201ENST00000397537 MGAM2Q2M2H8 2515 aa4.38□□□□□ -1.71
SMCO1-201ENST00000397537 IGLV3-21P80748 117 aaPredicted RBP4.38□□□□□ -1.71
SMCO1-201ENST00000397537 ESRGQ1W209 222 aa4.38□□□□□ -1.71
SMCO1-201ENST00000397537 CCL4L1Q8NHW4 92 aa4.38□□□□□ -1.71
SMCO1-201ENST00000397537 PRO1854Q9UHT4 67 aa4.38□□□□□ -1.71
SMCO1-201ENST00000397537 AKAP6Q13023 2319 aa4.38□□□□□ -1.71
SMCO1-201ENST00000397537 HMGN2P05204 90 aaKnown RBP4.37□□□□□ -1.71
SMCO1-201ENST00000397537 KRTAP24-1Q3LI83 254 aa4.37□□□□□ -1.71
SMCO1-201ENST00000397537 ATP5EP2Q5VTU8 51 aa4.37□□□□□ -1.71
SMCO1-201ENST00000397537 CLEC2BQ92478 149 aa4.37□□□□□ -1.71
SMCO1-201ENST00000397537 NABP2Q9BQ15 211 aa4.37□□□□□ -1.71
SMCO1-201ENST00000397537 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.37□□□□□ -1.71
SMCO1-201ENST00000397537 ZANQ9Y493 2812 aa4.37□□□□□ -1.71
SMCO1-201ENST00000397537 CPSF4LA6NMK7 179 aaKnown RBP4.37□□□□□ -1.71
SMCO1-201ENST00000397537 SPINK4O60575 86 aa4.37□□□□□ -1.71
SMCO1-201ENST00000397537 PLGLAQ15195 96 aa4.37□□□□□ -1.71
SMCO1-201ENST00000397537 IMMP1LQ96LU5 166 aa4.37□□□□□ -1.71
SMCO1-201ENST00000397537 ANK3Q12955 4377 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms