RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 TMEM101Q96IK0 257 aa6.87□□□□□ -1.31
NUP98-205ENST00000397007 IGLV5-39A0A0G2JS06 123 aa6.87□□□□□ -1.31
NUP98-205ENST00000397007 TMEM262E9PQX1 116 aa6.87□□□□□ -1.31
NUP98-205ENST00000397007 FA2HQ7L5A8 372 aa6.87□□□□□ -1.31
NUP98-205ENST00000397007 RMI2Q96E14 147 aa6.87□□□□□ -1.31
NUP98-205ENST00000397007 FAT3Q8TDW7 4589 aa6.86□□□□□ -1.31
NUP98-205ENST00000397007 ODF1Q14990 250 aa6.86□□□□□ -1.31
NUP98-205ENST00000397007 RNASE13Q5GAN3 156 aaKnown RBP6.86□□□□□ -1.31
NUP98-205ENST00000397007 C5orf52A6NGY3 159 aa6.86□□□□□ -1.31
NUP98-205ENST00000397007 C1orf196B1AJZ1 125 aa6.86□□□□□ -1.31
NUP98-205ENST00000397007 PMVKQ15126 192 aa6.86□□□□□ -1.31
NUP98-205ENST00000397007 IGHV3-64A0A075B6Q5 118 aa6.85□□□□□ -1.31
NUP98-205ENST00000397007 GAGE12HA6NDE8 117 aa6.85□□□□□ -1.31
NUP98-205ENST00000397007 CLPSL2Q6UWE3 100 aa6.85□□□□□ -1.31
NUP98-205ENST00000397007 F8WDY8 70 aa6.85□□□□□ -1.31
NUP98-205ENST00000397007 RNASEKQ6P5S7 137 aaKnown RBP6.85□□□□□ -1.31
NUP98-205ENST00000397007 HIST3H2BBQ8N257 126 aa6.85□□□□□ -1.31
NUP98-205ENST00000397007 FAT1Q14517 4588 aa6.84□□□□□ -1.31
NUP98-205ENST00000397007 USP17L23D6RBM5 183 aa6.84□□□□□ -1.31
NUP98-205ENST00000397007 TEX43Q6ZNM6 134 aa6.84□□□□□ -1.31
NUP98-205ENST00000397007 SCGB3A1Q96QR1 104 aa6.84□□□□□ -1.31
NUP98-205ENST00000397007 C1orf43Q9BWL3 253 aa6.84□□□□□ -1.31
NUP98-205ENST00000397007 AMMECR1LQ6DCA0 310 aa6.84□□□□□ -1.31
NUP98-205ENST00000397007 FAM19A2Q8N3H0 131 aa6.84□□□□□ -1.31
NUP98-205ENST00000397007 OR10D4PQ8NGN7 298 aa6.84□□□□□ -1.31
NUP98-205ENST00000397007 ATP5LO75964 103 aa6.83□□□□□ -1.32
NUP98-205ENST00000397007 SMIM1B2RUZ4 78 aa6.83□□□□□ -1.32
NUP98-205ENST00000397007 DGAT2L7PQ6IED9 249 aa6.83□□□□□ -1.32
NUP98-205ENST00000397007 CRPP02741 224 aa6.83□□□□□ -1.32
NUP98-205ENST00000397007 RNF151Q2KHN1 245 aa6.83□□□□□ -1.32
NUP98-205ENST00000397007 Q9HAA7 133 aa6.83□□□□□ -1.32
NUP98-205ENST00000397007 PGPEP1Q9NXJ5 209 aa6.83□□□□□ -1.32
NUP98-205ENST00000397007 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.82□□□□□ -1.32
NUP98-205ENST00000397007 ZNF22P17026 224 aaPredicted RBP6.82□□□□□ -1.32
NUP98-205ENST00000397007 SS18Q15532 418 aa6.82□□□□□ -1.32
NUP98-205ENST00000397007 C2orf48Q96LS8 159 aa6.82□□□□□ -1.32
NUP98-205ENST00000397007 PAPPA-AS1Q5QFB9 102 aa6.82□□□□□ -1.32
NUP98-205ENST00000397007 LINC01545Q5VT33 79 aa6.82□□□□□ -1.32
NUP98-205ENST00000397007 IFI27L1Q96BM0 104 aa6.82□□□□□ -1.32
NUP98-205ENST00000397007 IGLV10-54A0A075B6I4 117 aa6.81□□□□□ -1.32
NUP98-205ENST00000397007 IGKV2D-24A0A075B6R9 120 aa6.81□□□□□ -1.32
NUP98-205ENST00000397007 C9orf163Q8N9P6 203 aa6.81□□□□□ -1.32
NUP98-205ENST00000397007 IGHV1-58A0A0C4DH39 117 aa6.81□□□□□ -1.32
NUP98-205ENST00000397007 TLX1NBP0CAT3 122 aa6.81□□□□□ -1.32
NUP98-205ENST00000397007 A0A0J9YXV3 536 aa6.81□□□□□ -1.32
NUP98-205ENST00000397007 KRTAP10-1P60331 282 aa6.81□□□□□ -1.32
NUP98-205ENST00000397007 HERVK_113P63121 156 aa6.81□□□□□ -1.32
NUP98-205ENST00000397007 BAGE3Q86Y29 109 aa6.81□□□□□ -1.32
NUP98-205ENST00000397007 CDKN2A-AS1Q9UH64 79 aa6.81□□□□□ -1.32
NUP98-205ENST00000397007 SDIM1Q6ZPB5 146 aa6.8□□□□□ -1.32
NUP98-205ENST00000397007 VCX2Q9H322 139 aa6.8□□□□□ -1.32
NUP98-205ENST00000397007 C11orf86A6NJI1 115 aa6.8□□□□□ -1.32
NUP98-205ENST00000397007 TMEM223A0PJW6 202 aa6.79□□□□□ -1.32
NUP98-205ENST00000397007 F8VRH5 84 aa6.79□□□□□ -1.32
NUP98-205ENST00000397007 XCL1P47992 114 aa6.79□□□□□ -1.32
NUP98-205ENST00000397007 KRTAP10-4P60372 401 aaPredicted RBP6.79□□□□□ -1.32
NUP98-205ENST00000397007 Q8IZM0 81 aa6.79□□□□□ -1.32
NUP98-205ENST00000397007 HIST1H2BLQ99880 126 aa6.79□□□□□ -1.32
NUP98-205ENST00000397007 C2orf88Q9BSF0 95 aa6.79□□□□□ -1.32
NUP98-205ENST00000397007 COX7A2LO14548 114 aa6.79□□□□□ -1.32
NUP98-205ENST00000397007 ABCA13Q86UQ4 5058 aa6.79□□□□□ -1.32
NUP98-205ENST00000397007 XGP55808 180 aa6.79□□□□□ -1.32
NUP98-205ENST00000397007 SEC11AP67812 179 aa6.79□□□□□ -1.32
NUP98-205ENST00000397007 C14orf177Q52M58 125 aa6.79□□□□□ -1.32
NUP98-205ENST00000397007 TRAV13-1A0A0B4J241 112 aa6.78□□□□□ -1.32
NUP98-205ENST00000397007 HSBP1O75506 76 aa6.78□□□□□ -1.32
NUP98-205ENST00000397007 LEPROTL1O95214 131 aa6.78□□□□□ -1.32
NUP98-205ENST00000397007 SYS1-DBNDD2H3BUS1 97 aa6.78□□□□□ -1.32
NUP98-205ENST00000397007 CDK2AP2O75956 126 aa6.78□□□□□ -1.32
NUP98-205ENST00000397007 ZNF625Q96I27 306 aaPredicted RBP6.78□□□□□ -1.32
NUP98-205ENST00000397007 MRPL35Q9NZE8 188 aaKnown RBP6.78□□□□□ -1.32
NUP98-205ENST00000397007 KRTAP7-1Q8IUC3 87 aa6.77□□□□□ -1.33
NUP98-205ENST00000397007 PANO1I0J062 215 aa6.77□□□□□ -1.33
NUP98-205ENST00000397007 Q6ZN92 141 aa6.77□□□□□ -1.33
NUP98-205ENST00000397007 HSPB8Q9UJY1 196 aa6.77□□□□□ -1.33
NUP98-205ENST00000397007 C3orf79P0CE67 100 aa6.76□□□□□ -1.33
NUP98-205ENST00000397007 FAM30AQ9NZY2 134 aa6.76□□□□□ -1.33
NUP98-205ENST00000397007 C10orf25Q5T742 122 aa6.75□□□□□ -1.33
NUP98-205ENST00000397007 PET117Q6UWS5 81 aa6.75□□□□□ -1.33
NUP98-205ENST00000397007 SPACA4Q8TDM5 124 aa6.75□□□□□ -1.33
NUP98-205ENST00000397007 FUSP35637 526 aaKnown RBP eCLIP6.75□□□□□ -1.33
NUP98-205ENST00000397007 CHAC1Q9BUX1 264 aa6.75□□□□□ -1.33
NUP98-205ENST00000397007 C6orf48Q9UBA6 75 aa6.75□□□□□ -1.33
NUP98-205ENST00000397007 CHTOPQ9Y3Y2 248 aaKnown RBP6.75□□□□□ -1.33
NUP98-205ENST00000397007 NDUFA6P56556 154 aa6.75□□□□□ -1.33
NUP98-205ENST00000397007 LECT2O14960 151 aa6.74□□□□□ -1.33
NUP98-205ENST00000397007 CFAP161Q6P656 301 aa6.74□□□□□ -1.33
NUP98-205ENST00000397007 TNXBP22105 4242 aa6.74□□□□□ -1.33
NUP98-205ENST00000397007 Q6ZRU5 148 aa6.74□□□□□ -1.33
NUP98-205ENST00000397007 C5orf38Q86SI9 138 aa6.74□□□□□ -1.33
NUP98-205ENST00000397007 TRBV30A0A0K0K1B3 111 aa6.73□□□□□ -1.33
NUP98-205ENST00000397007 TSPEAR-AS2P59090 65 aa6.73□□□□□ -1.33
NUP98-205ENST00000397007 PLNP26678 52 aa6.73□□□□□ -1.33
NUP98-205ENST00000397007 LOC107984156A0A0G2JMH3 177 aa6.73□□□□□ -1.33
NUP98-205ENST00000397007 GCSHP23434 173 aa6.73□□□□□ -1.33
NUP98-205ENST00000397007 ARL17AQ8IVW1 177 aa6.73□□□□□ -1.33
NUP98-205ENST00000397007 PSCAO43653 123 aa6.72□□□□□ -1.33
NUP98-205ENST00000397007 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.72□□□□□ -1.33
NUP98-205ENST00000397007 IGLV5-52A0A0A0MRZ9 124 aa6.72□□□□□ -1.33
NUP98-205ENST00000397007 IGKV3OR2-268A0A0C4DH90 116 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms